| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623135
Identifier: 167623135
GI number: 167623135
Start: 1459791
End: 1460873
Strand: Reverse
Name: 167623135
Synonym: Shal_1201
Alternate gene names: NA
Gene position: 1460873-1459791 (Counterclockwise)
Preceding gene: 167623136
Following gene: 167623134
Centisome position: 27.95
GC content: 45.15
Gene sequence:
>1083_bases GTGGAGGCCAAGACTCAAGTTAGTACTCAAACCAAGAAGTCCACCAGCTTCTTAAACAGTATTAATCACTTTCGCGGCAT CGCGATTATATTTATCGTCATGGCCCACTGCTATCGCCCCGCTGGCTGGCAAATAGAAACCTTTGCCGACAAAGCATGGT TCAACTTAATGATGAATGGCACGGTGTTTTTTGTGTTTATCTCAGGTTTTCTATTCCACCATGTGTTTTATCATCGCTGG GACTATAAGAAGTATATGAAGAGCAAAACCAAGTTTGTTTTTCTGCCCTACTTATTACTGTCACTACCGTGGATTGTCTG GCACCTTACCGTCGGCACCGATCCTATGATGCATAAAGAACTTGCTGATATTACGATGCCAGCCGAGGCTGCAGGTTGGT ATGTGATTACAGGTCGCACCCTTACCGCTTATTGGTATATTCCCATGGGCATGATGCTGTTTGCGCTATCGCCTTGGGTT ATGTACCTGATTAAAAAACAGCAAGTGCTCTACTACGCTATCCCCTTGCTGCTTATCGCCATTATGGTGCACCGCCCCAT ATCCAATCTGAATGCGATTCAATCTTTAGTCTATTTCCTACCCGTTTATCTGCTAGGCGTTTGGGGCTCAGCCCATCGCG ATAAGTTGTTTCCCTTTATCGATAAATATTGGCTGCCGATGCTACTCACAGGAATTGCCCTGGCACTCATTCAAGCGCAA TACTTTGGAGCCGGTACGCTTAATAAAGCCCCATTTGAAATGACAGTGCCCGACTTAATGCTGCCACAAAAAATCTTACT CACGCTGGTGATATTGGCGATTTTGAACAAGTTTGAGCATATCTCGATTGCGCCGCTGCAAAAGCTGGCCGAGGTCAGCT TTGCGATTTACTTTATTCACCCTTGGATCACCACACCTTGGTGGATGATCTACGATAGCCCAGATCTATTAAACCTCGCT GGCCAGGGCAATATTTTTACCACCTTAATCGTCACCTTAGTGATTGTCGCGATCTCTTACATTATTGCCATCGTCATTAA GAAGTTACTCAGTAAACGTAGTCGCTACCTGATTGGTTGGTAA
Upstream 100 bases:
>100_bases TAATAACAACACGCTATCAATGGACGATAAAGCAATGGACGATAAAGCGAAGCCCACGCCGCAGGAAAGTCGTACTCACG AAAACTCACCGGGTACTGCA
Downstream 100 bases:
>100_bases TAACAAGCATTCGTTCAAAAATGAAACAGGTATAAACCAAAATAAAACTAACAACAAAGAAGTATCAATATATGTTTAAA ACCCTACTCTATGCCACAGC
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MEAKTQVSTQTKKSTSFLNSINHFRGIAIIFIVMAHCYRPAGWQIETFADKAWFNLMMNGTVFFVFISGFLFHHVFYHRW DYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHKELADITMPAEAAGWYVITGRTLTAYWYIPMGMMLFALSPWV MYLIKKQQVLYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDKLFPFIDKYWLPMLLTGIALALIQAQ YFGAGTLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFAIYFIHPWITTPWWMIYDSPDLLNLA GQGNIFTTLIVTLVIVAISYIIAIVIKKLLSKRSRYLIGW
Sequences:
>Translated_360_residues MEAKTQVSTQTKKSTSFLNSINHFRGIAIIFIVMAHCYRPAGWQIETFADKAWFNLMMNGTVFFVFISGFLFHHVFYHRW DYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHKELADITMPAEAAGWYVITGRTLTAYWYIPMGMMLFALSPWV MYLIKKQQVLYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDKLFPFIDKYWLPMLLTGIALALIQAQ YFGAGTLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFAIYFIHPWITTPWWMIYDSPDLLNLA GQGNIFTTLIVTLVIVAISYIIAIVIKKLLSKRSRYLIGW >Mature_360_residues MEAKTQVSTQTKKSTSFLNSINHFRGIAIIFIVMAHCYRPAGWQIETFADKAWFNLMMNGTVFFVFISGFLFHHVFYHRW DYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHKELADITMPAEAAGWYVITGRTLTAYWYIPMGMMLFALSPWV MYLIKKQQVLYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDKLFPFIDKYWLPMLLTGIALALIQAQ YFGAGTLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFAIYFIHPWITTPWWMIYDSPDLLNLA GQGNIFTTLIVTLVIVAISYIIAIVIKKLLSKRSRYLIGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41637; Mature: 41637
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAKTQVSTQTKKSTSFLNSINHFRGIAIIFIVMAHCYRPAGWQIETFADKAWFNLMMNG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC TVFFVFISGFLFHHVFYHRWDYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHEEEECCCCHHHHHH LADITMPAEAAGWYVITGRTLTAYWYIPMGMMLFALSPWVMYLIKKQQVLYYAIPLLLIA HHHCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDKLFPFIDKYWLPMLLTGIALALIQAQ HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YFGAGTLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFAIYFIH HCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEE PWITTPWWMIYDSPDLLNLAGQGNIFTTLIVTLVIVAISYIIAIVIKKLLSKRSRYLIGW CHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEAKTQVSTQTKKSTSFLNSINHFRGIAIIFIVMAHCYRPAGWQIETFADKAWFNLMMNG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC TVFFVFISGFLFHHVFYHRWDYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHEEEECCCCHHHHHH LADITMPAEAAGWYVITGRTLTAYWYIPMGMMLFALSPWVMYLIKKQQVLYYAIPLLLIA HHHCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDKLFPFIDKYWLPMLLTGIALALIQAQ HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YFGAGTLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFAIYFIH HCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEE PWITTPWWMIYDSPDLLNLAGQGNIFTTLIVTLVIVAISYIIAIVIKKLLSKRSRYLIGW CHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA