The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623069

Identifier: 167623069

GI number: 167623069

Start: 1379009

End: 1379530

Strand: Direct

Name: 167623069

Synonym: Shal_1135

Alternate gene names: NA

Gene position: 1379009-1379530 (Clockwise)

Preceding gene: 167623068

Following gene: 167623070

Centisome position: 26.38

GC content: 45.21

Gene sequence:

>522_bases
ATGGAGACCAGAGAGAAAGGACTTTCTTTAATTGAAGTACTCGTCGCTTTGGTTATTTTAACCGTTGGTCTAGTTGGCGT
CTTTAACCTTCATATCATTTCTAAACGTGGTAGTTTCGAGTCTTTTCAGCAGACTCAGGCCTCTTATTATGCTAACGATA
TTATTAACCGTATGAGGCTTAATCCTGGGCAGTTAGCAGGTTATGTTGGTAATTTTAGTGGTACGCCACCAATTCCTACC
CCCGCCTGTACAGGGGCTGCACTATGTTCTCCTGCGCAGACTGTGGGCTGGGATCTATATGAGTGGCGAGCAGCATTTAT
CGGGCAAGCAGAAACTGTCGGGGCTCAAAATGTTGGAGGGTTGGATACAGCCACTGGGTGTATAGCTATTAACGGCAATA
CAGTCACTGTCATCATGTCGTGGCAGGGAATAAGGTCTACATCAGATTCTGCAAACTTTCCCGATTGCGGAAGTTCAAGT
GATCGCCGACGAGTTTACTCCATTCAAACGGTGATTATTTAA

Upstream 100 bases:

>100_bases
TAACGTGTATGCTGTTTTAACACTTATAAGTAACCGATTTAAAACGGTAAAATCAAAATATTAACGTCAATAATATGACG
AATGCAAGAGGATTGACGGA

Downstream 100 bases:

>100_bases
ATGAAACACTTCGCTAAAAATAGCCCCTCTATACAGTATGGCATGTCACTCGTTGAGTTGATGGTTGCCATGGTGATCAG
CCTGTTTTTGTCTGCCGGTA

Product: type IV pilus modification protein PilV

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Related Transmembrane Protein; Type IV Pilus Biogenesis Protein; Type IV Pilus Assembly Protein PilV; Type IV Fimbrial Biogenesis Protein PilV; Methylation; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
METREKGLSLIEVLVALVILTVGLVGVFNLHIISKRGSFESFQQTQASYYANDIINRMRLNPGQLAGYVGNFSGTPPIPT
PACTGAALCSPAQTVGWDLYEWRAAFIGQAETVGAQNVGGLDTATGCIAINGNTVTVIMSWQGIRSTSDSANFPDCGSSS
DRRRVYSIQTVII

Sequences:

>Translated_173_residues
METREKGLSLIEVLVALVILTVGLVGVFNLHIISKRGSFESFQQTQASYYANDIINRMRLNPGQLAGYVGNFSGTPPIPT
PACTGAALCSPAQTVGWDLYEWRAAFIGQAETVGAQNVGGLDTATGCIAINGNTVTVIMSWQGIRSTSDSANFPDCGSSS
DRRRVYSIQTVII
>Mature_173_residues
METREKGLSLIEVLVALVILTVGLVGVFNLHIISKRGSFESFQQTQASYYANDIINRMRLNPGQLAGYVGNFSGTPPIPT
PACTGAALCSPAQTVGWDLYEWRAAFIGQAETVGAQNVGGLDTATGCIAINGNTVTVIMSWQGIRSTSDSANFPDCGSSS
DRRRVYSIQTVII

Specific function: Unknown

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18464; Mature: 18464

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METREKGLSLIEVLVALVILTVGLVGVFNLHIISKRGSFESFQQTQASYYANDIINRMRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
NPGQLAGYVGNFSGTPPIPTPACTGAALCSPAQTVGWDLYEWRAAFIGQAETVGAQNVGG
CHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCHHHCCCCCCCC
LDTATGCIAINGNTVTVIMSWQGIRSTSDSANFPDCGSSSDRRRVYSIQTVII
CCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
METREKGLSLIEVLVALVILTVGLVGVFNLHIISKRGSFESFQQTQASYYANDIINRMRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
NPGQLAGYVGNFSGTPPIPTPACTGAALCSPAQTVGWDLYEWRAAFIGQAETVGAQNVGG
CHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCHHHCCCCCCCC
LDTATGCIAINGNTVTVIMSWQGIRSTSDSANFPDCGSSSDRRRVYSIQTVII
CCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA