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The map label for this gene is rseA [H]

Identifier: 167623012

GI number: 167623012

Start: 1316916

End: 1317521

Strand: Direct

Name: rseA [H]

Synonym: Shal_1078

Alternate gene names: 167623012

Gene position: 1316916-1317521 (Clockwise)

Preceding gene: 167623011

Following gene: 167623013

Centisome position: 25.19

GC content: 44.22

Gene sequence:

>606_bases
ATGGATAAGTTAGGTCAGGAATGGGTATCTGCTGCTGTCGATGGTGAAATTGATGAGCACACGTTAGCTGAATTAGTCGC
TGACGCAGATTCACATGAGCAGTGGCGTGATTATCATATGATTGGTGATGCGATGCGTGGTGAGCTACCGAAGACGATGT
CTTTGGATCTCAGTGCAAGCATTATGGCGGCTATCGATGAAGAACCTGCGATTGTTGCGCCACAGCCAACAATAGTAGTG
AAAGAGTCAAATAGCGCATCAGGTGGAAAGGTTATTCCACTGTTTAAGCAATTTGGCCAATACGCTATTGCTGCTACTGT
CGCCATGGTTGCGGTTGTAGGGGTGCAAAACTACAACCAAGATACATTAATGGACAACTCTCCGTTGCCAGTGCTTAATA
CGCGTCCATTAATTGGTAGTGCATCTCCAGTTAGCTTACAAACTGGTGCTGTACAGCAGAACCAAAGTTATACTAATGAT
CAGGTAGTCGACCAACGTCGCCGTATTAATGCCTATATCCAAGATCATATGTTGCAACAAAGATTGAATAATGGAGTGAA
TATCGACGACAATAGTGAGGTCGATACTACACCTGTTGCTCAATAA

Upstream 100 bases:

>100_bases
GGCACTGTAAGATCACGGATCTTCAGAGCGCGAGAGGCAATCGATAAAAAGCTTAAGCCGTTGCTAGAACGTTAGCATCT
TAAATAAAGATAGGTGAATA

Downstream 100 bases:

>100_bases
TGAGGAGTTAGCTTGCGTCTAATCCTATTGGCTATTATAGCCATGAGTTTTCCCGCGATGGCGCGGGAAGATATGCCCGC
CAAAGCTTGGCTAGAAAATA

Product: anti sigma-E protein RseA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MDKLGQEWVSAAVDGEIDEHTLAELVADADSHEQWRDYHMIGDAMRGELPKTMSLDLSASIMAAIDEEPAIVAPQPTIVV
KESNSASGGKVIPLFKQFGQYAIAATVAMVAVVGVQNYNQDTLMDNSPLPVLNTRPLIGSASPVSLQTGAVQQNQSYTND
QVVDQRRRINAYIQDHMLQQRLNNGVNIDDNSEVDTTPVAQ

Sequences:

>Translated_201_residues
MDKLGQEWVSAAVDGEIDEHTLAELVADADSHEQWRDYHMIGDAMRGELPKTMSLDLSASIMAAIDEEPAIVAPQPTIVV
KESNSASGGKVIPLFKQFGQYAIAATVAMVAVVGVQNYNQDTLMDNSPLPVLNTRPLIGSASPVSLQTGAVQQNQSYTND
QVVDQRRRINAYIQDHMLQQRLNNGVNIDDNSEVDTTPVAQ
>Mature_201_residues
MDKLGQEWVSAAVDGEIDEHTLAELVADADSHEQWRDYHMIGDAMRGELPKTMSLDLSASIMAAIDEEPAIVAPQPTIVV
KESNSASGGKVIPLFKQFGQYAIAATVAMVAVVGVQNYNQDTLMDNSPLPVLNTRPLIGSASPVSLQTGAVQQNQSYTND
QVVDQRRRINAYIQDHMLQQRLNNGVNIDDNSEVDTTPVAQ

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=191, Percent_Identity=38.7434554973822, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 21875; Mature: 21875

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLGQEWVSAAVDGEIDEHTLAELVADADSHEQWRDYHMIGDAMRGELPKTMSLDLSAS
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHH
IMAAIDEEPAIVAPQPTIVVKESNSASGGKVIPLFKQFGQYAIAATVAMVAVVGVQNYNQ
HHHHHCCCCCEECCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DTLMDNSPLPVLNTRPLIGSASPVSLQTGAVQQNQSYTNDQVVDQRRRINAYIQDHMLQQ
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLNNGVNIDDNSEVDTTPVAQ
HHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKLGQEWVSAAVDGEIDEHTLAELVADADSHEQWRDYHMIGDAMRGELPKTMSLDLSAS
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHH
IMAAIDEEPAIVAPQPTIVVKESNSASGGKVIPLFKQFGQYAIAATVAMVAVVGVQNYNQ
HHHHHCCCCCEECCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DTLMDNSPLPVLNTRPLIGSASPVSLQTGAVQQNQSYTNDQVVDQRRRINAYIQDHMLQQ
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLNNGVNIDDNSEVDTTPVAQ
HHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]