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The map label for this gene is rseB [H]

Identifier: 167623013

GI number: 167623013

Start: 1317534

End: 1318466

Strand: Direct

Name: rseB [H]

Synonym: Shal_1079

Alternate gene names: 167623013

Gene position: 1317534-1318466 (Clockwise)

Preceding gene: 167623012

Following gene: 167623014

Centisome position: 25.21

GC content: 44.69

Gene sequence:

>933_bases
TTGCGTCTAATCCTATTGGCTATTATAGCCATGAGTTTTCCCGCGATGGCGCGGGAAGATATGCCCGCCAAAGCTTGGCT
AGAAAATATGAGCCAAGCCCTGCGAGAACAAGAATTTAAAATTTCCCTTATCCAACTTCAAGCCGATCATATCCGCCCGC
TGGTTTATATACACGGTAAAGTTAATGATGAAGAAGTGGCCTTTTTAGAGCACCTAAATGGACCGCCTAAAAATGCTGTG
CGAGTGGGAAATACTGTGACTTTTATCGAGCACGATCAACCTGCTTACAGTGTATATTCCAATCGTATTCAAGGGGTTAT
TCCTGGTGCATTTGCCGATGACGTCTCTAAGCTTGAGGATGGTTATCAGTTTGTCTTAGGGGGACGTAGCCGAATTGCGG
GTCGTCCAGGGCAACTTGTACGTATTATTCCTAACGATAACAACCGTTATGGCTACCAGATTTGGTTAGATATGGATACT
TACTTGCCGCTGCGTTTCGATATGATTAGTGGTGATAAGCAACTACTAGAGCAGTTATTGGTTGTTGAATTACTCGTGCT
TGACGAGGTTCCTGCGATTTTAAAAGAAGCCTACAAGCAAGAGTGGCCAGCTGTGATGTCTCAGTCTGACAGAGAAGGTG
GTGAGGATTGGCAATTTAGCTGGTTGCCAGCGGGATTTAAAGTACTCGTCAAAGATCAACATAGGTTGATTGGTAGCAAA
GAAGCGGTTGAATATATTGCCATCAGTGATGGTTTAGCCAATATATCTGTTTATGTCGCTAAAGCGGGGGAAGCACCACT
ACCTGAAGAGTTAGTTACCCGTAATGGTTTATCTCTAGCGACGGAGCGAGTCGGTAATGCCGAGGTCGTTGCTGTTGGTA
AAGTACCTGCTGAAACCTTAAGCCGTATTGCTAAAAGCATCATGTTGCAGTGA

Upstream 100 bases:

>100_bases
CCAAGATCATATGTTGCAACAAAGATTGAATAATGGAGTGAATATCGACGACAATAGTGAGGTCGATACTACACCTGTTG
CTCAATAATGAGGAGTTAGC

Downstream 100 bases:

>100_bases
TGAAGGTTCTATCATGATGGAAGAAGTCGCTAGAGTTGTCGCCAATGGCAACTCTGGTTGGGTCGTTGTAGAAGTTGAAA
TGAAGAGTGCCTGTAATCAC

Product: sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGKVNDEEVAFLEHLNGPPKNAV
RVGNTVTFIEHDQPAYSVYSNRIQGVIPGAFADDVSKLEDGYQFVLGGRSRIAGRPGQLVRIIPNDNNRYGYQIWLDMDT
YLPLRFDMISGDKQLLEQLLVVELLVLDEVPAILKEAYKQEWPAVMSQSDREGGEDWQFSWLPAGFKVLVKDQHRLIGSK
EAVEYIAISDGLANISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETLSRIAKSIMLQ

Sequences:

>Translated_310_residues
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGKVNDEEVAFLEHLNGPPKNAV
RVGNTVTFIEHDQPAYSVYSNRIQGVIPGAFADDVSKLEDGYQFVLGGRSRIAGRPGQLVRIIPNDNNRYGYQIWLDMDT
YLPLRFDMISGDKQLLEQLLVVELLVLDEVPAILKEAYKQEWPAVMSQSDREGGEDWQFSWLPAGFKVLVKDQHRLIGSK
EAVEYIAISDGLANISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETLSRIAKSIMLQ
>Mature_310_residues
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGKVNDEEVAFLEHLNGPPKNAV
RVGNTVTFIEHDQPAYSVYSNRIQGVIPGAFADDVSKLEDGYQFVLGGRSRIAGRPGQLVRIIPNDNNRYGYQIWLDMDT
YLPLRFDMISGDKQLLEQLLVVELLVLDEVPAILKEAYKQEWPAVMSQSDREGGEDWQFSWLPAGFKVLVKDQHRLIGSK
EAVEYIAISDGLANISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETLSRIAKSIMLQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=301, Percent_Identity=27.906976744186, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 34610; Mature: 34610

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGK
CHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEEHHHCCEEEEEECC
VNDEEVAFLEHLNGPPKNAVRVGNTVTFIEHDQPAYSVYSNRIQGVIPGAFADDVSKLED
CCCHHHHHHHHCCCCCCHHEEECCEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHC
GYQFVLGGRSRIAGRPGQLVRIIPNDNNRYGYQIWLDMDTYLPLRFDMISGDKQLLEQLL
CCEEEECCCHHCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHH
VVELLVLDEVPAILKEAYKQEWPAVMSQSDREGGEDWQFSWLPAGFKVLVKDQHRLIGSK
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCH
EAVEYIAISDGLANISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETL
HHEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEECCCCHHHH
SRIAKSIMLQ
HHHHHHHCCC
>Mature Secondary Structure
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGK
CHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEEHHHCCEEEEEECC
VNDEEVAFLEHLNGPPKNAVRVGNTVTFIEHDQPAYSVYSNRIQGVIPGAFADDVSKLED
CCCHHHHHHHHCCCCCCHHEEECCEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHC
GYQFVLGGRSRIAGRPGQLVRIIPNDNNRYGYQIWLDMDTYLPLRFDMISGDKQLLEQLL
CCEEEECCCHHCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHH
VVELLVLDEVPAILKEAYKQEWPAVMSQSDREGGEDWQFSWLPAGFKVLVKDQHRLIGSK
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCH
EAVEYIAISDGLANISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETL
HHEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEECCCCHHHH
SRIAKSIMLQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]