| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is ysnE [H]
Identifier: 167622987
GI number: 167622987
Start: 1286247
End: 1286702
Strand: Direct
Name: ysnE [H]
Synonym: Shal_1053
Alternate gene names: 167622987
Gene position: 1286247-1286702 (Clockwise)
Preceding gene: 167622986
Following gene: 167622996
Centisome position: 24.61
GC content: 48.9
Gene sequence:
>456_bases ATGCAGATTCGAGTAGGGCAACTGCGCAGTGAGCAGGTGCTGATGCTATTACAAGAGCACCATGAGGATATGGCATTACA CTCTCCACCAGAGAGTGTGCATGCGCTGAATGTATCTGGACTTGAGGCTGACGATGTTACCTTTTGGAGCCTTTGGTGCG AAGATGAACTGGCGGGTTGCGGCGCACTTAAACGGCTGGATAGTACTCACGGTGAAATCAAGTCGATGCGAACATCGAAC AACTTTCTTCGTCAAGGCGTCGCGCAAACGCTTCTGGCGCATATTATCGCTGAGGCAAGAGCGCGAGGTTATCAAAGACT CAGCCTTGAGACTGGCTCTATGGATGCCTTTATACCTGCTCGTAAACTCTATGAGCAGTTTGGCTTTACCGAGTGCTCAC CATTTGGCGATTATAAGCAGGATCCCTACAGCAGCTTTATGAGTAAAATGCTTTAA
Upstream 100 bases:
>100_bases GTATTATATCAATCGGAATGATATCAATGAGCATTATCAATGGGCATTGGATATCTTTAACCCCAAAAAATGGCCGTAAC ACCTGAGAATTGAGACAAAA
Downstream 100 bases:
>100_bases AACTAATGTTTCAAAACTAATGTTTCAAAACTAATGTTTCAAAACTAATAGCTTACAAAGCTAATACTTACAAAAATTAA GGCCTACAAAATTAAGTTTA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MQIRVGQLRSEQVLMLLQEHHEDMALHSPPESVHALNVSGLEADDVTFWSLWCEDELAGCGALKRLDSTHGEIKSMRTSN NFLRQGVAQTLLAHIIAEARARGYQRLSLETGSMDAFIPARKLYEQFGFTECSPFGDYKQDPYSSFMSKML
Sequences:
>Translated_151_residues MQIRVGQLRSEQVLMLLQEHHEDMALHSPPESVHALNVSGLEADDVTFWSLWCEDELAGCGALKRLDSTHGEIKSMRTSN NFLRQGVAQTLLAHIIAEARARGYQRLSLETGSMDAFIPARKLYEQFGFTECSPFGDYKQDPYSSFMSKML >Mature_151_residues MQIRVGQLRSEQVLMLLQEHHEDMALHSPPESVHALNVSGLEADDVTFWSLWCEDELAGCGALKRLDSTHGEIKSMRTSN NFLRQGVAQTLLAHIIAEARARGYQRLSLETGSMDAFIPARKLYEQFGFTECSPFGDYKQDPYSSFMSKML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788242, Length=149, Percent_Identity=48.993288590604, Blast_Score=144, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 17069; Mature: 17069
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIRVGQLRSEQVLMLLQEHHEDMALHSPPESVHALNVSGLEADDVTFWSLWCEDELAGC CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCCEEEEEEECCHHHHHH GALKRLDSTHGEIKSMRTSNNFLRQGVAQTLLAHIIAEARARGYQRLSLETGSMDAFIPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH RKLYEQFGFTECSPFGDYKQDPYSSFMSKML HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MQIRVGQLRSEQVLMLLQEHHEDMALHSPPESVHALNVSGLEADDVTFWSLWCEDELAGC CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCCEEEEEEECCHHHHHH GALKRLDSTHGEIKSMRTSNNFLRQGVAQTLLAHIIAEARARGYQRLSLETGSMDAFIPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH RKLYEQFGFTECSPFGDYKQDPYSSFMSKML HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]