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The map label for this gene is yhcC [H]

Identifier: 167622996

GI number: 167622996

Start: 1300543

End: 1301484

Strand: Direct

Name: yhcC [H]

Synonym: Shal_1062

Alternate gene names: 167622996

Gene position: 1300543-1301484 (Clockwise)

Preceding gene: 167622987

Following gene: 167622997

Centisome position: 24.88

GC content: 46.82

Gene sequence:

>942_bases
TTGGGACTGGATAGTTTCGTTAATACCTTCGGTGGTGTGTGTAAGCAAAAATATGGCGAGCGGATCCGTAAGCTGACAAT
CGATGCCAAGTTTACTTGTCCAAATCGCGATGGCACTTTAGGAAAGGGCGGCTGTACCTATTGTAATGTGGCTTCGTTCA
GTCATGAGCACAAGACCGAGCTATCTATTCAAGAGCAATTGGCTCAAGGCAGAGAGCGCCTGTCAACTAAATCGTCTAAG
TACATCGCCTACTTTCAAGCCTATACCAGTACTTACGATGAGTATCTCGTCCTTAAGCAAAAGTATGATGAGGCGATTCA
AGATAGCGATATTGTCGGCTTGTGTGTGGGTACTCGTCCCGATTGTGTTCCCGATGAGGTGCTAGAGTTATTGGTGGGCT
ATCAAAACGATGGCGTCGATGTATGGCTAGAGCTAGGGTTACAATCGGCAAATGACAGAACCCTTAAGAAGATAAACCGA
GGTCATGATTTTGCCGCCTACGAAGATACCGTAAAGCGTGCACGCCGCTTAGGAATAAAAGTTTGCACTCATCTAATCCT
CGGCTTGCCTGGTGAGGGTCATGAAGACTATCTAGAAACCCTAGACAAGGTGTTAGCCGTTGGCGTCGATGGCTTGAAGT
TGCATCCTTTACATATTGTCGAGGGGAGCACCATGGCAAAAGCTTGGCGTAACAATAAGATGAGCCTGCTTGAATTAGAG
ACTTATGCCTATAGCGTCGGTGAACTGATACGCTGGACGCCTAAGGAGGTGATTTTTCACCGAGTGACGGCTTATGCGAA
GAAACCTATGTTGTTAGCGCCAGACTGGTGTGCCTATCGTTGGAATGGTTTAGTTGCAATTGTTGACGATCTTAAAGCCA
AAGGTGGCCAGGGGACATATCTTGAGCCTTTGCAAGATCCCACAGTGCTCTTGGTTGAATAA

Upstream 100 bases:

>100_bases
CAGCCTCTATGCTGTCTTACGGTTATTTGAGCTAGCGCTAATTAATGTTTCTAAGAACTGGTTAAAATAACGCAAATTTT
TTTACTAGGTGATAGAACAG

Downstream 100 bases:

>100_bases
CGAACTGTCACTGTAGGCTGGTAAATCGTGAGACTTGAGTGCTTTTGTTTGATTTTATGTTGTTAAATGGTTAAATTTAA
GGGCTTTTTGAGGCTCATGC

Product: putative radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MGLDSFVNTFGGVCKQKYGERIRKLTIDAKFTCPNRDGTLGKGGCTYCNVASFSHEHKTELSIQEQLAQGRERLSTKSSK
YIAYFQAYTSTYDEYLVLKQKYDEAIQDSDIVGLCVGTRPDCVPDEVLELLVGYQNDGVDVWLELGLQSANDRTLKKINR
GHDFAAYEDTVKRARRLGIKVCTHLILGLPGEGHEDYLETLDKVLAVGVDGLKLHPLHIVEGSTMAKAWRNNKMSLLELE
TYAYSVGELIRWTPKEVIFHRVTAYAKKPMLLAPDWCAYRWNGLVAIVDDLKAKGGQGTYLEPLQDPTVLLVE

Sequences:

>Translated_313_residues
MGLDSFVNTFGGVCKQKYGERIRKLTIDAKFTCPNRDGTLGKGGCTYCNVASFSHEHKTELSIQEQLAQGRERLSTKSSK
YIAYFQAYTSTYDEYLVLKQKYDEAIQDSDIVGLCVGTRPDCVPDEVLELLVGYQNDGVDVWLELGLQSANDRTLKKINR
GHDFAAYEDTVKRARRLGIKVCTHLILGLPGEGHEDYLETLDKVLAVGVDGLKLHPLHIVEGSTMAKAWRNNKMSLLELE
TYAYSVGELIRWTPKEVIFHRVTAYAKKPMLLAPDWCAYRWNGLVAIVDDLKAKGGQGTYLEPLQDPTVLLVE
>Mature_312_residues
GLDSFVNTFGGVCKQKYGERIRKLTIDAKFTCPNRDGTLGKGGCTYCNVASFSHEHKTELSIQEQLAQGRERLSTKSSKY
IAYFQAYTSTYDEYLVLKQKYDEAIQDSDIVGLCVGTRPDCVPDEVLELLVGYQNDGVDVWLELGLQSANDRTLKKINRG
HDFAAYEDTVKRARRLGIKVCTHLILGLPGEGHEDYLETLDKVLAVGVDGLKLHPLHIVEGSTMAKAWRNNKMSLLELET
YAYSVGELIRWTPKEVIFHRVTAYAKKPMLLAPDWCAYRWNGLVAIVDDLKAKGGQGTYLEPLQDPTVLLVE

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=309, Percent_Identity=55.3398058252427, Blast_Score=369, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 35131; Mature: 34999

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLDSFVNTFGGVCKQKYGERIRKLTIDAKFTCPNRDGTLGKGGCTYCNVASFSHEHKTE
CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHH
LSIQEQLAQGRERLSTKSSKYIAYFQAYTSTYDEYLVLKQKYDEAIQDSDIVGLCVGTRP
HHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
DCVPDEVLELLVGYQNDGVDVWLELGLQSANDRTLKKINRGHDFAAYEDTVKRARRLGIK
CCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VCTHLILGLPGEGHEDYLETLDKVLAVGVDGLKLHPLHIVEGSTMAKAWRNNKMSLLELE
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECEEEEECCCHHHHHHHCCCCEEEEHH
TYAYSVGELIRWTPKEVIFHRVTAYAKKPMLLAPDWCAYRWNGLVAIVDDLKAKGGQGTY
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHCCEEEEEEHHHCCCCCCCC
LEPLQDPTVLLVE
CCCCCCCEEEEEC
>Mature Secondary Structure 
GLDSFVNTFGGVCKQKYGERIRKLTIDAKFTCPNRDGTLGKGGCTYCNVASFSHEHKTE
CHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHH
LSIQEQLAQGRERLSTKSSKYIAYFQAYTSTYDEYLVLKQKYDEAIQDSDIVGLCVGTRP
HHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
DCVPDEVLELLVGYQNDGVDVWLELGLQSANDRTLKKINRGHDFAAYEDTVKRARRLGIK
CCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VCTHLILGLPGEGHEDYLETLDKVLAVGVDGLKLHPLHIVEGSTMAKAWRNNKMSLLELE
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECEEEEECCCHHHHHHHCCCCEEEEHH
TYAYSVGELIRWTPKEVIFHRVTAYAKKPMLLAPDWCAYRWNGLVAIVDDLKAKGGQGTY
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHCCEEEEEEHHHCCCCCCCC
LEPLQDPTVLLVE
CCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]