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The map label for this gene is 167622964

Identifier: 167622964

GI number: 167622964

Start: 1259506

End: 1259916

Strand: Reverse

Name: 167622964

Synonym: Shal_1030

Alternate gene names: NA

Gene position: 1259916-1259506 (Counterclockwise)

Preceding gene: 167622965

Following gene: 167622962

Centisome position: 24.1

GC content: 46.96

Gene sequence:

>411_bases
ATGTTGAATCATTATTCGAAGTCTGTGTTAGCCGCCAGCTTGTCATTATTGGTATCAGCAAGCGTATCGGCTCAAGTTAC
CGATACCTCGTTTAAAGACACGCTAGCAGTATCAGAGCTCAAGCTTGAAGCCAAGATTCTGAATTACAAAGCGGACTCGA
GCAAGGGCGAAACCTTGGCCAACCAACGCTGTATCGCTTGTCATGGTGATGCCATGCTGGGCATGATGAAGACCTACCCA
GATCTTAAGGGTCAAAAGGCCGCTTACCTATTCAAGCAGCTAGTTGACTTTAAGCGTGGCGATCGCACCGACCCTTTAAT
GCAAGGTCAGGCTGGCATGTTGTCTGAAACAGAAATGAAAGACATCGCCTATTACTACTCTACGCAAACTGCGTCAGATT
TGAGCCAATAG

Upstream 100 bases:

>100_bases
TATTATGATGAGACAGGTATCGACATGAAGATCTTTAGACGCAAGCCTTTGGACGCAAATCAAATGCCGCCAATGCCTTC
TTCGAATGAGGAAAATTAGC

Downstream 100 bases:

>100_bases
TCTTAAGCGGTTCTTAGTATTAGCATTAAGCGGTTCTTAGTATTAGGCAGTTTTTAATATATGCCTTAAGCGGTCATAAA
TATTAGCAAAAGCCCGGATA

Product: cytochrome c class I

Products: NA

Alternate protein names: Monoheme Cytochrome C; Class I Cytochrome C; Cytochrome C; Cytochrome C Family Protein; Soluble Cytochrome CB

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLNHYSKSVLAASLSLLVSASVSAQVTDTSFKDTLAVSELKLEAKILNYKADSSKGETLANQRCIACHGDAMLGMMKTYP
DLKGQKAAYLFKQLVDFKRGDRTDPLMQGQAGMLSETEMKDIAYYYSTQTASDLSQ

Sequences:

>Translated_136_residues
MLNHYSKSVLAASLSLLVSASVSAQVTDTSFKDTLAVSELKLEAKILNYKADSSKGETLANQRCIACHGDAMLGMMKTYP
DLKGQKAAYLFKQLVDFKRGDRTDPLMQGQAGMLSETEMKDIAYYYSTQTASDLSQ
>Mature_136_residues
MLNHYSKSVLAASLSLLVSASVSAQVTDTSFKDTLAVSELKLEAKILNYKADSSKGETLANQRCIACHGDAMLGMMKTYP
DLKGQKAAYLFKQLVDFKRGDRTDPLMQGQAGMLSETEMKDIAYYYSTQTASDLSQ

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14905; Mature: 14905

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHYSKSVLAASLSLLVSASVSAQVTDTSFKDTLAVSELKLEAKILNYKADSSKGETLA
CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHH
NQRCIACHGDAMLGMMKTYPDLKGQKAAYLFKQLVDFKRGDRTDPLMQGQAGMLSETEMK
CCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DIAYYYSTQTASDLSQ
HHHHHHCCCCHHHCCC
>Mature Secondary Structure
MLNHYSKSVLAASLSLLVSASVSAQVTDTSFKDTLAVSELKLEAKILNYKADSSKGETLA
CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHH
NQRCIACHGDAMLGMMKTYPDLKGQKAAYLFKQLVDFKRGDRTDPLMQGQAGMLSETEMK
CCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DIAYYYSTQTASDLSQ
HHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA