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The map label for this gene is 167622888

Identifier: 167622888

GI number: 167622888

Start: 1165103

End: 1165696

Strand: Reverse

Name: 167622888

Synonym: Shal_0948

Alternate gene names: NA

Gene position: 1165696-1165103 (Counterclockwise)

Preceding gene: 167622889

Following gene: 167622887

Centisome position: 22.3

GC content: 49.16

Gene sequence:

>594_bases
ATGCCAGCTTTGCCAGCCGTTAAACTCAGCCAATCAGAGAAGCGGCAACTGCTAACTATAGTCCGTGACACGCTTATTGC
AGCCTTTTACCCTGACTATGTTGTAAAAAAACAACGGCAACTCGATGGTGGGCTTGAGCAACTAAAACTTGGCTGCTTCG
TTACCCTAACCTTAGATGGAGAGCTCAAGGGCTGCATAGGTCATATTGAATCTGACCGTCCGATTACCGAGCTACTGCCC
GCACTCGCAACCAGCAGCGCCTTCAACGATCGACGCTTTCCCCCCTTAGTCGAATCTCAACTTAACTCCCTTCGCATAGA
GCTCTCCCTTCTGTCAGAGATGCAAGGGGTCGAAGTCAATGAGCAGGCGGAACTGCAGCGCTATCTTAAGGGGAACTCAT
TAGGCTTAGTGTTAAGTGAAGGCGATAGAAGAGCCGTGTTTCTGCCACAGGTTTGGCAGCAATTACCTGAGCCTAAAGAG
TTTATCGAGGCACTCAAAGCCAAGGGGGGCTGGGACAGAGACTATTGGTCTTCTAATATGAAGGTCGAAGTCTTTAGCGT
GACTCATTTTAGCGAAAAGCAGCAGTACAGCTAA

Upstream 100 bases:

>100_bases
GCACTAATGCTGCAACTTAAACGTCACCAGCTGTGCCTTACCCAATTGAGTTATCAAAACTCCGGCGACACCGCCGGAGA
CAAAAATCGAGTCGTCGGCT

Downstream 100 bases:

>100_bases
TACGGTTCCCCTTTTTAAGCTTTATCCATTCAACCTGCAAGGCAAGGCTATCACGTTTACACAAGCGCTAAATTATATTA
AATTTAAATCAATATCTATT

Product: AMMECR1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPALPAVKLSQSEKRQLLTIVRDTLIAAFYPDYVVKKQRQLDGGLEQLKLGCFVTLTLDGELKGCIGHIESDRPITELLP
ALATSSAFNDRRFPPLVESQLNSLRIELSLLSEMQGVEVNEQAELQRYLKGNSLGLVLSEGDRRAVFLPQVWQQLPEPKE
FIEALKAKGGWDRDYWSSNMKVEVFSVTHFSEKQQYS

Sequences:

>Translated_197_residues
MPALPAVKLSQSEKRQLLTIVRDTLIAAFYPDYVVKKQRQLDGGLEQLKLGCFVTLTLDGELKGCIGHIESDRPITELLP
ALATSSAFNDRRFPPLVESQLNSLRIELSLLSEMQGVEVNEQAELQRYLKGNSLGLVLSEGDRRAVFLPQVWQQLPEPKE
FIEALKAKGGWDRDYWSSNMKVEVFSVTHFSEKQQYS
>Mature_196_residues
PALPAVKLSQSEKRQLLTIVRDTLIAAFYPDYVVKKQRQLDGGLEQLKLGCFVTLTLDGELKGCIGHIESDRPITELLPA
LATSSAFNDRRFPPLVESQLNSLRIELSLLSEMQGVEVNEQAELQRYLKGNSLGLVLSEGDRRAVFLPQVWQQLPEPKEF
IEALKAKGGWDRDYWSSNMKVEVFSVTHFSEKQQYS

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 22296; Mature: 22165

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALPAVKLSQSEKRQLLTIVRDTLIAAFYPDYVVKKQRQLDGGLEQLKLGCFVTLTLDG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEEEEEEECC
ELKGCIGHIESDRPITELLPALATSSAFNDRRFPPLVESQLNSLRIELSLLSEMQGVEVN
CHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
EQAELQRYLKGNSLGLVLSEGDRRAVFLPQVWQQLPEPKEFIEALKAKGGWDRDYWSSNM
HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCC
KVEVFSVTHFSEKQQYS
EEEEEEEEECCCCCCCC
>Mature Secondary Structure 
PALPAVKLSQSEKRQLLTIVRDTLIAAFYPDYVVKKQRQLDGGLEQLKLGCFVTLTLDG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEEEEEEECC
ELKGCIGHIESDRPITELLPALATSSAFNDRRFPPLVESQLNSLRIELSLLSEMQGVEVN
CHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
EQAELQRYLKGNSLGLVLSEGDRRAVFLPQVWQQLPEPKEFIEALKAKGGWDRDYWSSNM
HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCC
KVEVFSVTHFSEKQQYS
EEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]