| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622879
Identifier: 167622879
GI number: 167622879
Start: 1157110
End: 1157718
Strand: Reverse
Name: 167622879
Synonym: Shal_0939
Alternate gene names: NA
Gene position: 1157718-1157110 (Counterclockwise)
Preceding gene: 167622883
Following gene: 167622878
Centisome position: 22.15
GC content: 44.33
Gene sequence:
>609_bases ATGGAATTAGTCATCGTAAGTGCCAGCCAGAGAAGCCAGTCACAAAGTGCAAAAGTTGCGCGTTATCTTAACGAACGAGT CGAGGGTTTTAGCAAGGTTAATCACATCGAGCTTTACCAGTACAACTTACCCTTTTGGGATGGTTCAGCGGAAACCAAAT CTGCCGCAGGTAGTCGCTGGCCTATCATTTCTCAGCAAATAAATAAGGCTGATGCCTTAGTATTAATCACACCTGAATGG GGCGGTATGGCTTCGCCATTAATGAAGAACTTTTTGTTGATGTGTGACAAGCAAGATACCGCCCATAAACCAGCACTTTT AGTGGCCGTTGTCAGCGGGATCAGCGGCGCCTATCCCATCGCAGAATTGAGAATGAATGCCTTAAAGAACAATAAGCTTG TAGCAATACCCGATCACTTAATCATTCGAAATGTCGAGCAGGTGCTTAACCATGATAAGCCAGATGATGAGCGAGAGTTA CATTTACGAGAGCGTATAGACTACAGTTTGCATATGCTAGAGCAATACAGTGAAGCCTTAAAAACGATCCGTTATCAGCA CCAAAACCAACCTTTTCCAAAACAGCAGGAGTATAGCTACGGCATGTAG
Upstream 100 bases:
>100_bases ATTATTGCTAAACCGAGACTTAAGTAAACTTTTTTCTTTACTTTGTTTTGTAAGGCGATTACTTTACCTAAAGCTTAAAT AAACAAAAAGGTTTACTTAA
Downstream 100 bases:
>100_bases TCACAAAACAAATTATCGACCCGAACAGCGAGAATACAGTTACGCCATGTAACCGTAAGTCAATTTAGGACAATAATACA AGGAGTCAATTATGATGCGT
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Azoreductase; Flavoprotein; Reductase; Oxidoreductase
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MELVIVSASQRSQSQSAKVARYLNERVEGFSKVNHIELYQYNLPFWDGSAETKSAAGSRWPIISQQINKADALVLITPEW GGMASPLMKNFLLMCDKQDTAHKPALLVAVVSGISGAYPIAELRMNALKNNKLVAIPDHLIIRNVEQVLNHDKPDDEREL HLRERIDYSLHMLEQYSEALKTIRYQHQNQPFPKQQEYSYGM
Sequences:
>Translated_202_residues MELVIVSASQRSQSQSAKVARYLNERVEGFSKVNHIELYQYNLPFWDGSAETKSAAGSRWPIISQQINKADALVLITPEW GGMASPLMKNFLLMCDKQDTAHKPALLVAVVSGISGAYPIAELRMNALKNNKLVAIPDHLIIRNVEQVLNHDKPDDEREL HLRERIDYSLHMLEQYSEALKTIRYQHQNQPFPKQQEYSYGM >Mature_202_residues MELVIVSASQRSQSQSAKVARYLNERVEGFSKVNHIELYQYNLPFWDGSAETKSAAGSRWPIISQQINKADALVLITPEW GGMASPLMKNFLLMCDKQDTAHKPALLVAVVSGISGAYPIAELRMNALKNNKLVAIPDHLIIRNVEQVLNHDKPDDEREL HLRERIDYSLHMLEQYSEALKTIRYQHQNQPFPKQQEYSYGM
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23079; Mature: 23079
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVIVSASQRSQSQSAKVARYLNERVEGFSKVNHIELYQYNLPFWDGSAETKSAAGSRW CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHCCCCCC PIISQQINKADALVLITPEWGGMASPLMKNFLLMCDKQDTAHKPALLVAVVSGISGAYPI CHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHH AELRMNALKNNKLVAIPDHLIIRNVEQVLNHDKPDDERELHLRERIDYSLHMLEQYSEAL HHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KTIRYQHQNQPFPKQQEYSYGM HHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MELVIVSASQRSQSQSAKVARYLNERVEGFSKVNHIELYQYNLPFWDGSAETKSAAGSRW CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHCCCCCC PIISQQINKADALVLITPEWGGMASPLMKNFLLMCDKQDTAHKPALLVAVVSGISGAYPI CHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHH AELRMNALKNNKLVAIPDHLIIRNVEQVLNHDKPDDERELHLRERIDYSLHMLEQYSEAL HHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KTIRYQHQNQPFPKQQEYSYGM HHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA