Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is yhhY [H]

Identifier: 167622874

GI number: 167622874

Start: 1153124

End: 1153660

Strand: Direct

Name: yhhY [H]

Synonym: Shal_0934

Alternate gene names: 167622874

Gene position: 1153124-1153660 (Clockwise)

Preceding gene: 167622869

Following gene: 167622876

Centisome position: 22.06

GC content: 42.46

Gene sequence:

>537_bases
GTGATCGCAGACCGGATCCCGTTAGATAAGGGGAAAACTATTTTGGTAGATATTGATATTCGTCACAGTCATGATGCCGA
TATTGATGGTATTTGCCGGCTCTACAGCCAACAAAGTTGTTATGCAGGTACTCTACAGCACCCCTTTCCATCGTTACATT
CATGGCAAAAACGTCTGCTGGATCTGCCAGATAACTGCTATAGCCTTATTGCAGTGAGAGACGGAGACATCGTTGGTCAA
ATAGGGATGGAGGTGTTTAATAATCCTCGGCGTAAACACGTAGCTAATATCGGTATGGCTGTAGATGAAGCCTATCGAGG
AATTGGAATCGCCTCTGCAATGCTTGAAGCCATGATATCACTTGCACAAAATTGGCTTGCAGTAAGACGAATAGAACTTG
AAGTCTACACCGATAATCACTTAGCAATTAGTCTCTATAAAAAACATGGCTTCGTGATTGAGGGCGAAATGCGTGAATAT
GCTTTTCGTAATGGAGAGTATATAGACGCATTTCTGATGGCAAATGTCAGAGATTAA

Upstream 100 bases:

>100_bases
ACAGTAGTGTTAAACGGTGCTTCATGCTTAACTGTTGACATATAAGTAATTTTGTCGAAAGTTAGTTGTTCATCAGTGAG
ATAGAAAAAAGGAGTTTGTG

Downstream 100 bases:

>100_bases
CTGTTTTTCTCTGGAGTCTTAGCTAGCACAAATTGAGTGGCTTGCTCATCTAGACTGCGCTTAGATAGGTAACTGGTTCC
CTTGCTGTGTTTGATTAAGA

Product: GCN5-like N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLLDLPDNCYSLIAVRDGDIVGQ
IGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMISLAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREY
AFRNGEYIDAFLMANVRD

Sequences:

>Translated_178_residues
MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLLDLPDNCYSLIAVRDGDIVGQ
IGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMISLAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREY
AFRNGEYIDAFLMANVRD
>Mature_178_residues
MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLLDLPDNCYSLIAVRDGDIVGQ
IGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMISLAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREY
AFRNGEYIDAFLMANVRD

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1789849, Length=163, Percent_Identity=47.239263803681, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 20222; Mature: 20222

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLL
CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
DLPDNCYSLIAVRDGDIVGQIGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMIS
CCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREYAFRNGEYIDAFLMANVRD
HHHHHHEEEEEEEEEEECCEEEEEEEECCCEEEECCHHHHHHCCCCEEEEEEEEECCC
>Mature Secondary Structure
MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLL
CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
DLPDNCYSLIAVRDGDIVGQIGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMIS
CCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREYAFRNGEYIDAFLMANVRD
HHHHHHEEEEEEEEEEECCEEEEEEEECCCEEEECCHHHHHHCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]