| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yhhY [H]
Identifier: 167622874
GI number: 167622874
Start: 1153124
End: 1153660
Strand: Direct
Name: yhhY [H]
Synonym: Shal_0934
Alternate gene names: 167622874
Gene position: 1153124-1153660 (Clockwise)
Preceding gene: 167622869
Following gene: 167622876
Centisome position: 22.06
GC content: 42.46
Gene sequence:
>537_bases GTGATCGCAGACCGGATCCCGTTAGATAAGGGGAAAACTATTTTGGTAGATATTGATATTCGTCACAGTCATGATGCCGA TATTGATGGTATTTGCCGGCTCTACAGCCAACAAAGTTGTTATGCAGGTACTCTACAGCACCCCTTTCCATCGTTACATT CATGGCAAAAACGTCTGCTGGATCTGCCAGATAACTGCTATAGCCTTATTGCAGTGAGAGACGGAGACATCGTTGGTCAA ATAGGGATGGAGGTGTTTAATAATCCTCGGCGTAAACACGTAGCTAATATCGGTATGGCTGTAGATGAAGCCTATCGAGG AATTGGAATCGCCTCTGCAATGCTTGAAGCCATGATATCACTTGCACAAAATTGGCTTGCAGTAAGACGAATAGAACTTG AAGTCTACACCGATAATCACTTAGCAATTAGTCTCTATAAAAAACATGGCTTCGTGATTGAGGGCGAAATGCGTGAATAT GCTTTTCGTAATGGAGAGTATATAGACGCATTTCTGATGGCAAATGTCAGAGATTAA
Upstream 100 bases:
>100_bases ACAGTAGTGTTAAACGGTGCTTCATGCTTAACTGTTGACATATAAGTAATTTTGTCGAAAGTTAGTTGTTCATCAGTGAG ATAGAAAAAAGGAGTTTGTG
Downstream 100 bases:
>100_bases CTGTTTTTCTCTGGAGTCTTAGCTAGCACAAATTGAGTGGCTTGCTCATCTAGACTGCGCTTAGATAGGTAACTGGTTCC CTTGCTGTGTTTGATTAAGA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLLDLPDNCYSLIAVRDGDIVGQ IGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMISLAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREY AFRNGEYIDAFLMANVRD
Sequences:
>Translated_178_residues MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLLDLPDNCYSLIAVRDGDIVGQ IGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMISLAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREY AFRNGEYIDAFLMANVRD >Mature_178_residues MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLLDLPDNCYSLIAVRDGDIVGQ IGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMISLAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREY AFRNGEYIDAFLMANVRD
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789849, Length=163, Percent_Identity=47.239263803681, Blast_Score=159, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 20222; Mature: 20222
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLL CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH DLPDNCYSLIAVRDGDIVGQIGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMIS CCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREYAFRNGEYIDAFLMANVRD HHHHHHEEEEEEEEEEECCEEEEEEEECCCEEEECCHHHHHHCCCCEEEEEEEEECCC >Mature Secondary Structure MIADRIPLDKGKTILVDIDIRHSHDADIDGICRLYSQQSCYAGTLQHPFPSLHSWQKRLL CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH DLPDNCYSLIAVRDGDIVGQIGMEVFNNPRRKHVANIGMAVDEAYRGIGIASAMLEAMIS CCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAQNWLAVRRIELEVYTDNHLAISLYKKHGFVIEGEMREYAFRNGEYIDAFLMANVRD HHHHHHEEEEEEEEEEECCEEEEEEEECCCEEEECCHHHHHHCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]