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The map label for this gene is dadA [H]

Identifier: 167622807

GI number: 167622807

Start: 1082541

End: 1083851

Strand: Reverse

Name: dadA [H]

Synonym: Shal_0867

Alternate gene names: 167622807

Gene position: 1083851-1082541 (Counterclockwise)

Preceding gene: 167622808

Following gene: 167622803

Centisome position: 20.74

GC content: 49.73

Gene sequence:

>1311_bases
ATGACAGTCAAACAGATGAAGAACACTTCCAAGGATGTTGCAGTAATAGGTGGCGGCATTATAGGGGTCTGCAGTGCCTA
CTACCTCCATAAGGCAGGTAAGTCTGTGGTGGTTATCGACAAGGATGAGATAGGTAAAGCCTGCTCCTTTGGTAACGCGG
GTTACATTACCCCGAGCCACTTCATTCCGCTGGCGGCTCCGGGCATGATCCAAAAAGGCATTAAGTGGATGTTAAACCCA
CAAAGCCCCTTCTACGTGCGCCCAAGTCTCAATGTCGATTTCTTAAAATGGCTACTGTCTTTCGCCAAGAAGTGTACGCC
GCAACATACCCTTGCAAGCCAGCAAGCGATTTTAGATATCAATCTTAAATCCCTTGAGCTGTATCAGGCATTACACCAAG
AGGCAGAGTTTGACTTTGAGTTCCACCAAAATGGCCTGCTGATGCTCTGTAAAACCCAGCAAGGTTTAAACGATGAAGCG
GCAACGGTGATGGCAGCCAACAAACTCGGTTTGAAAGCGAAAATGTTAACTGCCCAAGCGCTGAAAGAGTTAGAGCCCAA
TATCAAACTCGATGTGATGGGCGCAGGCTTCTATCCAGAAGACGCGCATATTGCCCCTTATGAGTTTATCGTGGCGATGA
AAAACTACTTAGCCGCTCAAGGGGTAGAGTTCAGGGAGCACTGCGAGATCACCGGCTTTACTACCGATACTAGCAAGAGC
GAAATTTGCGCAGCAACAACAGCAATCGGCGAAATTAACGCAGATGAATTTATCCTCGCCAACGGCGCATGGTCGCCAAA
ACTCGCCAAACAGCTGGGCTTTAGTCTACCGGTACAACCCGGCAAAGGGATCTGTATCAGCTTCGATAGCGCTCCCGTTA
AAGACGGCGCCAAGCTTGAGTGCCGCACCCCGTTTATCTTAAGTGAAGCCAAGGTTGCGGTCAGTCCGCTAGATAACGGC
ATTCGATTTGGCGGCACCATGGAGTTAGGGGTGTTATCGAGCCAAGAATCTTCAGGGATCAGCCACAACAGGATCAAGGG
ACTCACTAAATCCGCAGCACGTTATCTACCGGATTTGGATACCACTCAAGTTGACCCCAAAGAGTTTTGGTCAGGCTTTC
GCCCTTGTAGCCCAGATGGTCTGCCGATAATAGGCAGAGCGCCTCAGTTAGCAAATCTCACCTTAGCAACCGGACACGCC
ATGATGGGTCTCAGTCTTGGCCCGATAACGGGCAAGCTGGTTAGCGAGATCATTGCCAAAGAGGAAACCTCTCTAGATCT
CACCCCTTTTTCACCGCAGAGGTTTGGATAA

Upstream 100 bases:

>100_bases
TCATCTAGCTTAGGTTTATCAACAACACTTGATTTAGAACAATTCCTGTTCGTCAGTCCCCTGTAGTTTATCCACTAAAA
TCAGGGCATCAGGAAAGAAG

Downstream 100 bases:

>100_bases
AATGGGAGCTTTCTCTAAAAGACTAGTGAGAATGATCTAAACGAAAAATGGACACAAGCGGCTCACCACGGCGAATATGG
CGAAGCCATGTGCTAATAAG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTVKQMKNTSKDVAVIGGGIIGVCSAYYLHKAGKSVVVIDKDEIGKACSFGNAGYITPSHFIPLAAPGMIQKGIKWMLNP
QSPFYVRPSLNVDFLKWLLSFAKKCTPQHTLASQQAILDINLKSLELYQALHQEAEFDFEFHQNGLLMLCKTQQGLNDEA
ATVMAANKLGLKAKMLTAQALKELEPNIKLDVMGAGFYPEDAHIAPYEFIVAMKNYLAAQGVEFREHCEITGFTTDTSKS
EICAATTAIGEINADEFILANGAWSPKLAKQLGFSLPVQPGKGICISFDSAPVKDGAKLECRTPFILSEAKVAVSPLDNG
IRFGGTMELGVLSSQESSGISHNRIKGLTKSAARYLPDLDTTQVDPKEFWSGFRPCSPDGLPIIGRAPQLANLTLATGHA
MMGLSLGPITGKLVSEIIAKEETSLDLTPFSPQRFG

Sequences:

>Translated_436_residues
MTVKQMKNTSKDVAVIGGGIIGVCSAYYLHKAGKSVVVIDKDEIGKACSFGNAGYITPSHFIPLAAPGMIQKGIKWMLNP
QSPFYVRPSLNVDFLKWLLSFAKKCTPQHTLASQQAILDINLKSLELYQALHQEAEFDFEFHQNGLLMLCKTQQGLNDEA
ATVMAANKLGLKAKMLTAQALKELEPNIKLDVMGAGFYPEDAHIAPYEFIVAMKNYLAAQGVEFREHCEITGFTTDTSKS
EICAATTAIGEINADEFILANGAWSPKLAKQLGFSLPVQPGKGICISFDSAPVKDGAKLECRTPFILSEAKVAVSPLDNG
IRFGGTMELGVLSSQESSGISHNRIKGLTKSAARYLPDLDTTQVDPKEFWSGFRPCSPDGLPIIGRAPQLANLTLATGHA
MMGLSLGPITGKLVSEIIAKEETSLDLTPFSPQRFG
>Mature_435_residues
TVKQMKNTSKDVAVIGGGIIGVCSAYYLHKAGKSVVVIDKDEIGKACSFGNAGYITPSHFIPLAAPGMIQKGIKWMLNPQ
SPFYVRPSLNVDFLKWLLSFAKKCTPQHTLASQQAILDINLKSLELYQALHQEAEFDFEFHQNGLLMLCKTQQGLNDEAA
TVMAANKLGLKAKMLTAQALKELEPNIKLDVMGAGFYPEDAHIAPYEFIVAMKNYLAAQGVEFREHCEITGFTTDTSKSE
ICAATTAIGEINADEFILANGAWSPKLAKQLGFSLPVQPGKGICISFDSAPVKDGAKLECRTPFILSEAKVAVSPLDNGI
RFGGTMELGVLSSQESSGISHNRIKGLTKSAARYLPDLDTTQVDPKEFWSGFRPCSPDGLPIIGRAPQLANLTLATGHAM
MGLSLGPITGKLVSEIIAKEETSLDLTPFSPQRFG

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI194306651, Length=448, Percent_Identity=21.2053571428571, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787438, Length=431, Percent_Identity=28.7703016241299, Blast_Score=175, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076
- InterPro:   IPR006036 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47102; Mature: 46971

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKQMKNTSKDVAVIGGGIIGVCSAYYLHKAGKSVVVIDKDEIGKACSFGNAGYITPSH
CCHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHCCCHHCCCCCCCCCCCC
FIPLAAPGMIQKGIKWMLNPQSPFYVRPSLNVDFLKWLLSFAKKCTPQHTLASQQAILDI
CCCCCCCHHHHHCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCEEEEE
NLKSLELYQALHQEAEFDFEFHQNGLLMLCKTQQGLNDEAATVMAANKLGLKAKMLTAQA
CHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCHHEEEEHHHCCCHHHHHHHHH
LKELEPNIKLDVMGAGFYPEDAHIAPYEFIVAMKNYLAAQGVEFREHCEITGFTTDTSKS
HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCC
EICAATTAIGEINADEFILANGAWSPKLAKQLGFSLPVQPGKGICISFDSAPVKDGAKLE
HHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEE
CRTPFILSEAKVAVSPLDNGIRFGGTMELGVLSSQESSGISHNRIKGLTKSAARYLPDLD
ECCCEEECCCEEEECCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
TTQVDPKEFWSGFRPCSPDGLPIIGRAPQLANLTLATGHAMMGLSLGPITGKLVSEIIAK
CCCCCHHHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCEEECCEECCCHHHHHHHHHHC
EETSLDLTPFSPQRFG
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVKQMKNTSKDVAVIGGGIIGVCSAYYLHKAGKSVVVIDKDEIGKACSFGNAGYITPSH
CHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHCCCHHCCCCCCCCCCCC
FIPLAAPGMIQKGIKWMLNPQSPFYVRPSLNVDFLKWLLSFAKKCTPQHTLASQQAILDI
CCCCCCCHHHHHCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCEEEEE
NLKSLELYQALHQEAEFDFEFHQNGLLMLCKTQQGLNDEAATVMAANKLGLKAKMLTAQA
CHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCHHEEEEHHHCCCHHHHHHHHH
LKELEPNIKLDVMGAGFYPEDAHIAPYEFIVAMKNYLAAQGVEFREHCEITGFTTDTSKS
HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCC
EICAATTAIGEINADEFILANGAWSPKLAKQLGFSLPVQPGKGICISFDSAPVKDGAKLE
HHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEE
CRTPFILSEAKVAVSPLDNGIRFGGTMELGVLSSQESSGISHNRIKGLTKSAARYLPDLD
ECCCEEECCCEEEECCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
TTQVDPKEFWSGFRPCSPDGLPIIGRAPQLANLTLATGHAMMGLSLGPITGKLVSEIIAK
CCCCCHHHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCEEECCEECCCHHHHHHHHHHC
EETSLDLTPFSPQRFG
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]