Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622806

Identifier: 167622806

GI number: 167622806

Start: 1081339

End: 1081836

Strand: Direct

Name: 167622806

Synonym: Shal_0866

Alternate gene names: NA

Gene position: 1081339-1081836 (Clockwise)

Preceding gene: 167622805

Following gene: 167622809

Centisome position: 20.69

GC content: 35.94

Gene sequence:

>498_bases
ATGAACAAATTATCTACCCTAGCTTTGATTGTATTATTAACAGCTTCTACTTCTGCCATGGCAGTTGATACCTCTCCTTA
CCTTGGTGCTGGTGTTGCTGATATTGATGGGGTTAATTTTGTAGAACTGAAAGGAGGAGTTGTCTTTGAAGGTGAAACTT
TCTGGGGAACTGTAGGTTTGACTTACGGTCTTGGTGAAGATATAGACGTTTTACAAATAGAAGAATTAGAGGAAATCCAA
ATTGATACAAAAATAGGTGTCAAATTTGGAGATGATTATCTTGGGTTCCATCCATATTTAACAGTGGCTTATGGCGAAGG
AAAGGCCACAATATATAATTATTCTGGTGATGACAACTATATATTTGTTGGTGCCGGTGCTGAAGTGCAGATTGCTAAAA
ATTATGTTATCTCTGCAGAGTTTGGAAATCTGAAATTAGACGAACTATCTGAAATAAGTGCGAATGTTACACGTATTAAC
TTTGCTTATAAATTCTAA

Upstream 100 bases:

>100_bases
CCATCGAATGAAAACATGAGGCCTAGGTTGATGGCGGCTCTGCCGACGCCTGCTATATTAGATTGTGCATAACAAATTCA
ACTATAAAAGGATTTAAGTA

Downstream 100 bases:

>100_bases
CTAATTTATGCATATAGCTTCAGCTTGGATCGGGAGCTATATGTCTAAGCAGGAGTTACCTCCTGCAACTAATAACCAAG
TGCGCCATTAGTGCATCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNKLSTLALIVLLTASTSAMAVDTSPYLGAGVADIDGVNFVELKGGVVFEGETFWGTVGLTYGLGEDIDVLQIEELEEIQ
IDTKIGVKFGDDYLGFHPYLTVAYGEGKATIYNYSGDDNYIFVGAGAEVQIAKNYVISAEFGNLKLDELSEISANVTRIN
FAYKF

Sequences:

>Translated_165_residues
MNKLSTLALIVLLTASTSAMAVDTSPYLGAGVADIDGVNFVELKGGVVFEGETFWGTVGLTYGLGEDIDVLQIEELEEIQ
IDTKIGVKFGDDYLGFHPYLTVAYGEGKATIYNYSGDDNYIFVGAGAEVQIAKNYVISAEFGNLKLDELSEISANVTRIN
FAYKF
>Mature_165_residues
MNKLSTLALIVLLTASTSAMAVDTSPYLGAGVADIDGVNFVELKGGVVFEGETFWGTVGLTYGLGEDIDVLQIEELEEIQ
IDTKIGVKFGDDYLGFHPYLTVAYGEGKATIYNYSGDDNYIFVGAGAEVQIAKNYVISAEFGNLKLDELSEISANVTRIN
FAYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17834; Mature: 17834

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSTLALIVLLTASTSAMAVDTSPYLGAGVADIDGVNFVELKGGVVFEGETFWGTVGL
CCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECCEEEEEEEE
TYGLGEDIDVLQIEELEEIQIDTKIGVKFGDDYLGFHPYLTVAYGEGKATIYNYSGDDNY
EECCCCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCE
IFVGAGAEVQIAKNYVISAEFGNLKLDELSEISANVTRINFAYKF
EEEECCCEEEEECEEEEEEECCCEEHHHHHHCCCCEEEEEEEEEC
>Mature Secondary Structure
MNKLSTLALIVLLTASTSAMAVDTSPYLGAGVADIDGVNFVELKGGVVFEGETFWGTVGL
CCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECCEEEEEEEE
TYGLGEDIDVLQIEELEEIQIDTKIGVKFGDDYLGFHPYLTVAYGEGKATIYNYSGDDNY
EECCCCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCE
IFVGAGAEVQIAKNYVISAEFGNLKLDELSEISANVTRINFAYKF
EEEECCCEEEEECEEEEEEECCCEEHHHHHHCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA