Click here to switch to the map view.

The map label for this gene is yhaO [H]

Identifier: 167622805

GI number: 167622805

Start: 1079312

End: 1080640

Strand: Direct

Name: yhaO [H]

Synonym: Shal_0865

Alternate gene names: 167622805

Gene position: 1079312-1080640 (Clockwise)

Preceding gene: 167622804

Following gene: 167622806

Centisome position: 20.65

GC content: 43.42

Gene sequence:

>1329_bases
ATGAGTGAAGTAGTTCAAGGCGCACCAAGTGGTGATAGCCAAGCGCAACCCTTGCACGAACGTGCCAATATGACGAAAGC
TGAATGGCAGCAAGCCACCAAGTTTGATAGTGTCGACCTGGGTTGGATAGTGATGAGTATTGGTATGGCTATCGGTGCAG
GTATTGTATTTTTACCTGTTCAGGTTGGCGTGATGGGACTATGGGTATTTTTGTTGTCATCCATTATTGGTTACCCAGCA
ATGTACCTATTTCAAAAGTTATTCATTAACACCTTAGCGGAGTCAAAAAAGTGTACCGATTACCCAGGTGTTATTGAAAA
CTATCTCGGCAAAAACTGGGGTATTGCATTAGGTGTGCTTTATTTCTTGATGTTGGTCATTTGGGTGCTGGTTTATTCGT
TAGCCGTGACCAATGACAGTGCGTCATACCTGCATTCATTTGGCGTCACAGAGGGATACCTTAACGACAATGTATTTTAT
GGTTTAGGCTTAATCTGCATATTGGCCTTTATCGGCTCAAAAGGTGAAAAGCTGCTATTTAAACTGTCAGGTTTTATGGC
TGTGACAGTGTTGACGCTAGTGGCGGTAATGGGTGTGCTACTGATGGCGCGTTGGGATATGGCGAATATTCCAAGTATGG
GTGATTTTGGCCCAATGCTGAAAAATGCCATTATTACGCTGCCATTTACCTTAACCTCGATTCTGTTTATCCAATCGTTA
AGCCCAATGGTTATCTCGTATCGCTCACACGAAAAGTCGATTGAGGTTGCGCGCTTCAAGGCTGAGCGAGCAATGAAAAT
TGCCTTTTCCATCCTATTCGTGGTGGTATTCTTCTTTGCGATATCCTTCACCTTTGCCATCAGTCAAGAGCAAGCGACTG
AGGCGATGAACCAGAACATATCAGCTCTGGCAATTATTGCGCAGTACTTCCCAGGCTCATGGGCGACGGTTACCGGTATT
GTGATTAACATCTTTGCGGTGGTTACGTCATTCTTTGGTGTGTTCTTAGCCTTCCAAGAAGCCTGCCGTGGTATTGCAAT
GAACATATTGCTGCGTAGCCGTAAAGAATCAGAGATTAATAAAGAGCTAGTCAATAAATTAATCACAGTATTCATTATTT
TACTGGCTTGGTCTGCCATCGCCTTAAATGCACCAATCCTATCATTCACCTCTATCTGTAGCCCTATCTTCGGTATGGTG
GGTTGTTTAATCCCAGCTTACTTGGTGTACAAGGTGCCACATTTAAACAAATACAAGGGTTGGGCAACTAACCTGATTAT
TGTGACGGGTGTTTTGTTGTGTATCTCACCATTACTGGCATTTATGTAA

Upstream 100 bases:

>100_bases
CTCAGGCTAAGTAAACGCGGTAAAACCCCTGTTTTCTCATAAACATAATTATAATTTTTATCATGTCAGTGGCACTTGCC
AAATTTAATGGGATTGATAT

Downstream 100 bases:

>100_bases
TTGTTATTTAGCTTTAAATAGCAGGCCATAAAAAACCGATGCATAACAGCATCGGTTTTTTTATAAGCCAATGATGACCC
ATTACTGAGTGAGTTCACGG

Product: serine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSEVVQGAPSGDSQAQPLHERANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPVQVGVMGLWVFLLSSIIGYPA
MYLFQKLFINTLAESKKCTDYPGVIENYLGKNWGIALGVLYFLMLVIWVLVYSLAVTNDSASYLHSFGVTEGYLNDNVFY
GLGLICILAFIGSKGEKLLFKLSGFMAVTVLTLVAVMGVLLMARWDMANIPSMGDFGPMLKNAIITLPFTLTSILFIQSL
SPMVISYRSHEKSIEVARFKAERAMKIAFSILFVVVFFFAISFTFAISQEQATEAMNQNISALAIIAQYFPGSWATVTGI
VINIFAVVTSFFGVFLAFQEACRGIAMNILLRSRKESEINKELVNKLITVFIILLAWSAIALNAPILSFTSICSPIFGMV
GCLIPAYLVYKVPHLNKYKGWATNLIIVTGVLLCISPLLAFM

Sequences:

>Translated_442_residues
MSEVVQGAPSGDSQAQPLHERANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPVQVGVMGLWVFLLSSIIGYPA
MYLFQKLFINTLAESKKCTDYPGVIENYLGKNWGIALGVLYFLMLVIWVLVYSLAVTNDSASYLHSFGVTEGYLNDNVFY
GLGLICILAFIGSKGEKLLFKLSGFMAVTVLTLVAVMGVLLMARWDMANIPSMGDFGPMLKNAIITLPFTLTSILFIQSL
SPMVISYRSHEKSIEVARFKAERAMKIAFSILFVVVFFFAISFTFAISQEQATEAMNQNISALAIIAQYFPGSWATVTGI
VINIFAVVTSFFGVFLAFQEACRGIAMNILLRSRKESEINKELVNKLITVFIILLAWSAIALNAPILSFTSICSPIFGMV
GCLIPAYLVYKVPHLNKYKGWATNLIIVTGVLLCISPLLAFM
>Mature_441_residues
SEVVQGAPSGDSQAQPLHERANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPVQVGVMGLWVFLLSSIIGYPAM
YLFQKLFINTLAESKKCTDYPGVIENYLGKNWGIALGVLYFLMLVIWVLVYSLAVTNDSASYLHSFGVTEGYLNDNVFYG
LGLICILAFIGSKGEKLLFKLSGFMAVTVLTLVAVMGVLLMARWDMANIPSMGDFGPMLKNAIITLPFTLTSILFIQSLS
PMVISYRSHEKSIEVARFKAERAMKIAFSILFVVVFFFAISFTFAISQEQATEAMNQNISALAIIAQYFPGSWATVTGIV
INIFAVVTSFFGVFLAFQEACRGIAMNILLRSRKESEINKELVNKLITVFIILLAWSAIALNAPILSFTSICSPIFGMVG
CLIPAYLVYKVPHLNKYKGWATNLIIVTGVLLCISPLLAFM

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693183, Length=424, Percent_Identity=68.6320754716981, Blast_Score=590, Evalue=1e-170,
Organism=Escherichia coli, GI1789961, Length=407, Percent_Identity=42.7518427518428, Blast_Score=347, Evalue=6e-97,
Organism=Escherichia coli, GI1789160, Length=419, Percent_Identity=26.491646778043, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1789211, Length=398, Percent_Identity=23.3668341708543, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789504, Length=437, Percent_Identity=25.1716247139588, Blast_Score=111, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48592; Mature: 48460

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SEVVQGAPSGDSQAQPLHERANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPV
CCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH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HHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]