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The map label for this gene is yhaM [C]

Identifier: 167622804

GI number: 167622804

Start: 1077194

End: 1078507

Strand: Direct

Name: yhaM [C]

Synonym: Shal_0864

Alternate gene names: 167622804

Gene position: 1077194-1078507 (Clockwise)

Preceding gene: 167622802

Following gene: 167622805

Centisome position: 20.61

GC content: 47.11

Gene sequence:

>1314_bases
ATGAAACAACACTTATGGCCTTTATTCCTTGAAGCAGTTAAACGCGATGTCGTTCCAGCCCTTGGCTGTACTGAACCTAT
TTCTGTTGCATTAGCTGCCGCCATTGCCATTGATGAGTTAGGCATAAAAAACCAAGCCAGTAACGTTAAGCTGGACGTTA
AAATAGACGTTGCTGTTTCTGCCAACTTAATGAAAAACGGCATGGGCGTGGGTATTCCTGGCACTGGAATGGTTGGCTTG
CCGATTGCAGCAGCCATTGGTGCCATCGCAGGCGATCGCCATGCCGGTCTTGAAGTGTTAAAAAGCATCAAGGATAGCGA
TGTTCAGGCCGCTAAATTGATGCTGGCGAACGAGCTAGTGACTGTTGGGGTCGCCGATGTGGCTAACATCCTGTACGCCA
AAGTCACCGTTTATTATCAGCAGCAAACGGCGAGCGTCACCATTGCCGATAGCCACACCAAAGTTATTGCGATTGAAAAA
AATGGCGAGCAATGTTTACTTGAGTCACAGGCCAAGACGACTAATGATAACAGCTGCAAAGCCAACCCATTTACTGAGGC
AAAACTGCAAGATATTTATGATTTTGCCATGCAAGCACCATTGGATGACATTCGTTTCATTATGCAGGCCAAAACCCTAA
ATGATGCCTTATCCATTGAAGGACTCAGTGGTAATTATGGTTTGAAAATTGGTGCGACATTGGTAAAAAACCAAGCTAAA
GGCTTATTGTCTGGTGGGTTACTGACAGAAGTATTGGCCCGTACTGCAGGGGCTTCTGATGCACGAATGGATGGCGCGAT
GATGCCTGCGATGAGTAATTCAGGCTCTGGAAATCAAGGTATTGCGGCAACCATGCCTGTCGTTGCCTGTGCTGAGTTTC
TCAAATCCAGCGAAACACAAACGATCCGTGCGTTAATGCTGTCGCACTTAACGGCTATCTATATTAAGAGCTATCAGAAC
AAACTCTCAGCCTTATGCGGAGCGACAACGGCATCGATGGGGGCGGCGGCTGGCATAACCTATCTGCTTGATGGCGAGCT
TGAGCAGATAAGTGCTGCCATTTGCAGCATGATTGGCGACGTCAGTGGCATTATCTGTGATGGTGCAAAAGCCTCCTGTG
CAATGAAAGTGTCTTCATCAGCAGGATCTGCGGTAAAATCTGCCTTGATGGCCATTGATGGCATTCGGGTGACGGGGACT
GAAGGTATTGTTGCCGATGATGTCGATCAAACTATCTGTAACCTTGCTACATTGGCTAATGGCGCAATGACACAAACCGA
TGTGCAGATCTTAGAGATTATGCTTCACAAGTAA

Upstream 100 bases:

>100_bases
AAAAATGGAAAAATAATTCTTCAAGTAATCCATTACAATGAAACAAAGATTGCAATGACTTTATTCCAAATAGTGTCGAT
GACTAGAAGCGAGTAGAACA

Downstream 100 bases:

>100_bases
GCACGGTTTTTTTGATAAAGTAGATTAATAGCGCTTATCAAAAAGCTTAAGTTAGAATTTTAAGCCAAGTCGGTACTCAA
TTAAGAGTCGACTTGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKQHLWPLFLEAVKRDVVPALGCTEPISVALAAAIAIDELGIKNQASNVKLDVKIDVAVSANLMKNGMGVGIPGTGMVGL
PIAAAIGAIAGDRHAGLEVLKSIKDSDVQAAKLMLANELVTVGVADVANILYAKVTVYYQQQTASVTIADSHTKVIAIEK
NGEQCLLESQAKTTNDNSCKANPFTEAKLQDIYDFAMQAPLDDIRFIMQAKTLNDALSIEGLSGNYGLKIGATLVKNQAK
GLLSGGLLTEVLARTAGASDARMDGAMMPAMSNSGSGNQGIAATMPVVACAEFLKSSETQTIRALMLSHLTAIYIKSYQN
KLSALCGATTASMGAAAGITYLLDGELEQISAAICSMIGDVSGIICDGAKASCAMKVSSSAGSAVKSALMAIDGIRVTGT
EGIVADDVDQTICNLATLANGAMTQTDVQILEIMLHK

Sequences:

>Translated_437_residues
MKQHLWPLFLEAVKRDVVPALGCTEPISVALAAAIAIDELGIKNQASNVKLDVKIDVAVSANLMKNGMGVGIPGTGMVGL
PIAAAIGAIAGDRHAGLEVLKSIKDSDVQAAKLMLANELVTVGVADVANILYAKVTVYYQQQTASVTIADSHTKVIAIEK
NGEQCLLESQAKTTNDNSCKANPFTEAKLQDIYDFAMQAPLDDIRFIMQAKTLNDALSIEGLSGNYGLKIGATLVKNQAK
GLLSGGLLTEVLARTAGASDARMDGAMMPAMSNSGSGNQGIAATMPVVACAEFLKSSETQTIRALMLSHLTAIYIKSYQN
KLSALCGATTASMGAAAGITYLLDGELEQISAAICSMIGDVSGIICDGAKASCAMKVSSSAGSAVKSALMAIDGIRVTGT
EGIVADDVDQTICNLATLANGAMTQTDVQILEIMLHK
>Mature_437_residues
MKQHLWPLFLEAVKRDVVPALGCTEPISVALAAAIAIDELGIKNQASNVKLDVKIDVAVSANLMKNGMGVGIPGTGMVGL
PIAAAIGAIAGDRHAGLEVLKSIKDSDVQAAKLMLANELVTVGVADVANILYAKVTVYYQQQTASVTIADSHTKVIAIEK
NGEQCLLESQAKTTNDNSCKANPFTEAKLQDIYDFAMQAPLDDIRFIMQAKTLNDALSIEGLSGNYGLKIGATLVKNQAK
GLLSGGLLTEVLARTAGASDARMDGAMMPAMSNSGSGNQGIAATMPVVACAEFLKSSETQTIRALMLSHLTAIYIKSYQN
KLSALCGATTASMGAAAGITYLLDGELEQISAAICSMIGDVSGIICDGAKASCAMKVSSSAGSAVKSALMAIDGIRVTGT
EGIVADDVDQTICNLATLANGAMTQTDVQILEIMLHK

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=434, Percent_Identity=51.3824884792627, Blast_Score=369, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y864_SHEHH (B0TUD9)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001673098.1
- GeneID:   5903415
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_0864
- HOGENOM:   HBG296671
- OMA:   PVMSNSG
- ProtClustDB:   CLSK932050
- BioCyc:   SHAL458817:SHAL_0864-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 45273; Mature: 45273

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHLWPLFLEAVKRDVVPALGCTEPISVALAAAIAIDELGIKNQASNVKLDVKIDVAVS
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEE
ANLMKNGMGVGIPGTGMVGLPIAAAIGAIAGDRHAGLEVLKSIKDSDVQAAKLMLANELV
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
TVGVADVANILYAKVTVYYQQQTASVTIADSHTKVIAIEKNGEQCLLESQAKTTNDNSCK
HHHHHHHHHHHHHHHEEEEEECCCEEEEECCCEEEEEEECCCCEEEHCCCCCCCCCCCCC
ANPFTEAKLQDIYDFAMQAPLDDIRFIMQAKTLNDALSIEGLSGNYGLKIGATLVKNQAK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEECCCCCCCEEECHHHHHHHHH
GLLSGGLLTEVLARTAGASDARMDGAMMPAMSNSGSGNQGIAATMPVVACAEFLKSSETQ
HHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
TIRALMLSHLTAIYIKSYQNKLSALCGATTASMGAAAGITYLLDGELEQISAAICSMIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHC
VSGIICDGAKASCAMKVSSSAGSAVKSALMAIDGIRVTGTEGIVADDVDQTICNLATLAN
CCCEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCEECCHHHHHHHHHHHCC
GAMTQTDVQILEIMLHK
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKQHLWPLFLEAVKRDVVPALGCTEPISVALAAAIAIDELGIKNQASNVKLDVKIDVAVS
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEE
ANLMKNGMGVGIPGTGMVGLPIAAAIGAIAGDRHAGLEVLKSIKDSDVQAAKLMLANELV
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
TVGVADVANILYAKVTVYYQQQTASVTIADSHTKVIAIEKNGEQCLLESQAKTTNDNSCK
HHHHHHHHHHHHHHHEEEEEECCCEEEEECCCEEEEEEECCCCEEEHCCCCCCCCCCCCC
ANPFTEAKLQDIYDFAMQAPLDDIRFIMQAKTLNDALSIEGLSGNYGLKIGATLVKNQAK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEECCCCCCCEEECHHHHHHHHH
GLLSGGLLTEVLARTAGASDARMDGAMMPAMSNSGSGNQGIAATMPVVACAEFLKSSETQ
HHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
TIRALMLSHLTAIYIKSYQNKLSALCGATTASMGAAAGITYLLDGELEQISAAICSMIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHC
VSGIICDGAKASCAMKVSSSAGSAVKSALMAIDGIRVTGTEGIVADDVDQTICNLATLAN
CCCEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCEECCHHHHHHHHHHHCC
GAMTQTDVQILEIMLHK
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA