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The map label for this gene is recJ [H]

Identifier: 167622802

GI number: 167622802

Start: 1074563

End: 1076287

Strand: Direct

Name: recJ [H]

Synonym: Shal_0862

Alternate gene names: 167622802

Gene position: 1074563-1076287 (Clockwise)

Preceding gene: 167622801

Following gene: 167622804

Centisome position: 20.56

GC content: 52.58

Gene sequence:

>1725_bases
GTGATCCATAAGATAGTTCGCCGCCTCAGAGTGGATGATAGTCACCTTCCCGATACGTTTTCGCCAATCTTAAAACAGAT
CTATGCCAGCCGCGGCTTGAGTGCGTCTGACTGCGAGTTAAGCTTAGCTAAATTACTTAGGCCCGATACCATGGCCGGGC
TAGAACAAGCCGCCAAAATCATTGCCGACGGCATAGCGGCGCAAAAAGCGATTCTGATCATGGGTGACTTCGATGCCGAT
GGCGCAACCTCAACTAGCGTGTGCATACTCGCGCTTAGAATGATGGGCGCGCAGAAGGTGGATTACCTGATCCCAAACCG
TTTTGACTATGGCTACGGCTTAAGCCCTGAGATTGTCGCTGTCGCTGCGAGTAAGCAGGCCGAGCTACTGATCACAGTCG
ATAATGGCATTTCCTCCATAGAAGGAGTTGCCGCCGCAAAAGCTTGTGGAATGACAGTGGTTATCACCGATCACCATCTT
CCGGGTCACACCCTGCCTGATGCCGATGCTATCGTGAACCCAAACCAAGATGGCTGTGGCTTTGCCAGTAAGTCTATCGC
TGGTGTTGGCGTGGCTTTTTACTTGATGTCGGCGCTGAGAGCCGAGCTTAGAAGCCGTAACTGGTATCTAGAGCAGGGCA
TTAGTGAGCCCAATCTTGCACAGCTACTGGATATTGTAGCCCTTGGTACCGTTGCCGATGTGGTATCGCTCGACACCAAT
AACCGTATCTTAGTGGAAGCGGGTCTACAGCGAGTTAAAGCGGGACGTTGCCGTGTGGGGATCACCGCTTTACTGGAAGT
GGCTAAACGTACTCCTTCACGTATTGTCGCATCAGACTTTGGCTTCGCCGTTGGCCCAAGACTTAACGCCGCAGGCCGTC
TCGATGAGATGGCGTTAGGCGTCGAAACCTTGCTGTGTGACGATATCATGCTGGCTCGTCGCATGGCATCTGAACTCGAT
GGCCTCAATGCCGAGCGCCGTGATTTAGAAGCCGATATGCAGCAAGAGGCGCTTAAGAGCCTTGAGAGTATCGAGCTTAA
CGAAGCGGAGTTGCCATGGGGCATTGCCATTTATCAAGCCGATTGGCACCAAGGCGTGATAGGTATCTTGGCCTCTCGCA
TTAAAGACAAGTATCACCGCCCAGTAATCGCCTTTGCCGAAGCGGGTGACGGCGAGATAAAAGGCTCGGCGCGCTCGATT
AAGGGCTTGCATATGCGTGACCTGCTCGAGCTGATTAATACCCGCCACCCGGGGCTTATCCTAAAGTTCGGTGGTCACGC
TATGGCCGCAGGCTTATCGATTCAAGCGGGTCAGTTTGCCCTGTTTGCCGATGCCTACGACAAGGCCGTACGGGAAGTAT
TAGCGCCTGAGTTGTTAACTGGCGAGCTGGTCTCAGACGGCGAGCTGGTGCCTGAGCAGTTTAAACTTGAGCTTGCTAGT
GAGCTAAGATCTGCTGGCCCGTGGGGCCAGTCATTCCCGGAGCCGCTGTTTGATGGCTATTTTAGGGTTATTCAGCAGCG
CATTGTTGGCGAGAAACATTTGAAATTGATTTTAGAAACCGAATGCGGCCGAGTAATGCTCGATGCCATCGCCTTTAATG
TGGACTTGAAGACATGGCCCGATGCCACCATTCAGTACGCACAGGTGGTGTATAAACTCGATGTGAATGAGTTTAGGGGC
AATCAGAGTTTGCAGCTGATGGTTGAGCAGATAGAGCCCAAGTAG

Upstream 100 bases:

>100_bases
AGAAGCAAAAAGGTGAGCCTAGGCTCACCTTTTTTGTGCCCCTTTGCCAGCAGTCTTTGCTATGCTGACAGGGTTTATTT
TTTTGAGGGTTTAATCCAAC

Downstream 100 bases:

>100_bases
GAATTTAGTAGGGATTGTAGAGGGGTGCACTGGTTGCATCCCTTTTTGTTTTCAGCCCTAAACCATCGACTTATGAAAGC
GGAGCTTTTACTTGGTCTGA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MIHKIVRRLRVDDSHLPDTFSPILKQIYASRGLSASDCELSLAKLLRPDTMAGLEQAAKIIADGIAAQKAILIMGDFDAD
GATSTSVCILALRMMGAQKVDYLIPNRFDYGYGLSPEIVAVAASKQAELLITVDNGISSIEGVAAAKACGMTVVITDHHL
PGHTLPDADAIVNPNQDGCGFASKSIAGVGVAFYLMSALRAELRSRNWYLEQGISEPNLAQLLDIVALGTVADVVSLDTN
NRILVEAGLQRVKAGRCRVGITALLEVAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALGVETLLCDDIMLARRMASELD
GLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIYQADWHQGVIGILASRIKDKYHRPVIAFAEAGDGEIKGSARSI
KGLHMRDLLELINTRHPGLILKFGGHAMAAGLSIQAGQFALFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
ELRSAGPWGQSFPEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWPDATIQYAQVVYKLDVNEFRG
NQSLQLMVEQIEPK

Sequences:

>Translated_574_residues
MIHKIVRRLRVDDSHLPDTFSPILKQIYASRGLSASDCELSLAKLLRPDTMAGLEQAAKIIADGIAAQKAILIMGDFDAD
GATSTSVCILALRMMGAQKVDYLIPNRFDYGYGLSPEIVAVAASKQAELLITVDNGISSIEGVAAAKACGMTVVITDHHL
PGHTLPDADAIVNPNQDGCGFASKSIAGVGVAFYLMSALRAELRSRNWYLEQGISEPNLAQLLDIVALGTVADVVSLDTN
NRILVEAGLQRVKAGRCRVGITALLEVAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALGVETLLCDDIMLARRMASELD
GLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIYQADWHQGVIGILASRIKDKYHRPVIAFAEAGDGEIKGSARSI
KGLHMRDLLELINTRHPGLILKFGGHAMAAGLSIQAGQFALFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
ELRSAGPWGQSFPEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWPDATIQYAQVVYKLDVNEFRG
NQSLQLMVEQIEPK
>Mature_574_residues
MIHKIVRRLRVDDSHLPDTFSPILKQIYASRGLSASDCELSLAKLLRPDTMAGLEQAAKIIADGIAAQKAILIMGDFDAD
GATSTSVCILALRMMGAQKVDYLIPNRFDYGYGLSPEIVAVAASKQAELLITVDNGISSIEGVAAAKACGMTVVITDHHL
PGHTLPDADAIVNPNQDGCGFASKSIAGVGVAFYLMSALRAELRSRNWYLEQGISEPNLAQLLDIVALGTVADVVSLDTN
NRILVEAGLQRVKAGRCRVGITALLEVAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALGVETLLCDDIMLARRMASELD
GLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIYQADWHQGVIGILASRIKDKYHRPVIAFAEAGDGEIKGSARSI
KGLHMRDLLELINTRHPGLILKFGGHAMAAGLSIQAGQFALFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
ELRSAGPWGQSFPEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWPDATIQYAQVVYKLDVNEFRG
NQSLQLMVEQIEPK

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=570, Percent_Identity=56.8421052631579, Blast_Score=671, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62392; Mature: 62392

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHKIVRRLRVDDSHLPDTFSPILKQIYASRGLSASDCELSLAKLLRPDTMAGLEQAAKI
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
IADGIAAQKAILIMGDFDADGATSTSVCILALRMMGAQKVDYLIPNRFDYGYGLSPEIVA
HHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEE
VAASKQAELLITVDNGISSIEGVAAAKACGMTVVITDHHLPGHTLPDADAIVNPNQDGCG
EEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCCCC
FASKSIAGVGVAFYLMSALRAELRSRNWYLEQGISEPNLAQLLDIVALGTVADVVSLDTN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVEAGLQRVKAGRCRVGITALLEVAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALG
CEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH
VETLLCDDIMLARRMASELDGLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIYQA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
DWHQGVIGILASRIKDKYHRPVIAFAEAGDGEIKGSARSIKGLHMRDLLELINTRHPGLI
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCEE
LKFGGHAMAAGLSIQAGQFALFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
EEECCCCHHCCCEEECCCEEEEHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHH
ELRSAGPWGQSFPEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHEEEHHHEECCCCCCC
DATIQYAQVVYKLDVNEFRGNQSLQLMVEQIEPK
CHHHHHHHHHHEECHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIHKIVRRLRVDDSHLPDTFSPILKQIYASRGLSASDCELSLAKLLRPDTMAGLEQAAKI
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
IADGIAAQKAILIMGDFDADGATSTSVCILALRMMGAQKVDYLIPNRFDYGYGLSPEIVA
HHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEE
VAASKQAELLITVDNGISSIEGVAAAKACGMTVVITDHHLPGHTLPDADAIVNPNQDGCG
EEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCCCC
FASKSIAGVGVAFYLMSALRAELRSRNWYLEQGISEPNLAQLLDIVALGTVADVVSLDTN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVEAGLQRVKAGRCRVGITALLEVAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALG
CEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH
VETLLCDDIMLARRMASELDGLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIYQA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
DWHQGVIGILASRIKDKYHRPVIAFAEAGDGEIKGSARSIKGLHMRDLLELINTRHPGLI
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCEE
LKFGGHAMAAGLSIQAGQFALFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
EEECCCCHHCCCEEECCCEEEEHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHH
ELRSAGPWGQSFPEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHEEEHHHEECCCCCCC
DATIQYAQVVYKLDVNEFRGNQSLQLMVEQIEPK
CHHHHHHHHHHEECHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]