| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fba [H]
Identifier: 167622787
GI number: 167622787
Start: 1054258
End: 1055322
Strand: Direct
Name: fba [H]
Synonym: Shal_0847
Alternate gene names: 167622787
Gene position: 1054258-1055322 (Clockwise)
Preceding gene: 167622786
Following gene: 167622788
Centisome position: 20.17
GC content: 48.92
Gene sequence:
>1065_bases ATGGCCTTAATTTCCCTACGTCAAATGTTAGATCACGCAGCAGAGCATGGATATGGCGTTCCTGCGTTTAACGTGAATAA CCTTGAGCAGATGCGCGCTATTATGCAGGCAGCTGAAGCAACTGACAGCCCTGTAATCGTTCAGGCATCTGCTGGTGCAC GTAAGTATGCGCGTCCGCAGTTCCTTAAGTACCTAATGGCCGCTGCACTTGAGCAGTATCCAGATATCCCTGTCTGTATT CACCAAGATCACGGCACCGATCCAGATATCTGTCAGCGTTCTATTCAGTTAGGCATGTCTTCAGTAATGATGGACGGCTC TTTGATGGCTGATGGTAAGACGCCTGCATCATACGAATACAACGTAGACGTGACTCGCCGTACTGTAGCCTTTGCTCACG CATGTGGTGTGTCTGTAGAAGGTGAAATTGGCTGTCTAGGTAGTCTCGAGACGGGTATGGCTGGTGAAGAAGATGGTGTT GGCGCAGAAGGTATTTTGAGCCACGATCAACTACTGACGACTCCAGAAGAAGCGGCTCGTTTCGTTGCTGATACTCACGT TGATGCACTAGCTATTGCTATCGGTACTAGCCACGGTGCTTACAAGTTCAGCCGTAAGCCTACCGGTGACGTGCTACGAA TCGATCGTATCAAAGAGATCCACGCGCGTATTCCTAACACTCACCTAGTTATGCATGGTTCGTCTTCTGTGCCACAAGAG TGGCTTGAGATCATCAACCAGTATGGTGGTGCGATTCCAGAAACTTACGGTGTGCCATTAGAAGAGATCGTTGAAGGTAT CAAGCACGGTGTACGCAAAGTGAACATCGATACCGATCTACGCCTAGCATCGACAGGCGCAGTGCGTAAGTTCCTTGCTG AAAACCCATCTGAATTTGACCCGCGTAAATTCTTGAAGGCGTCAATGGAAGCGATGGCTGATATCTGTACTACACGTTAC GAAGCCTTCGGTTGTGCCGGCATGGCGTCTAAGATCAAGCCTAAGTCACTACAAGCTATGTATAAAGCTTACCAGTCAGG CGAGCTTGACCCACAGATCAAGTAA
Upstream 100 bases:
>100_bases TAGGGTTAGCCAGCTTAGAACTGGAAACGTTAGAGCATAAAAATCCATCCAAACGATAGTGACCTTGGTGAGGCGACTCA CCCTATTATTGGAGTAAAAA
Downstream 100 bases:
>100_bases GTATGAGCCGACATTGATCGAGTAAGAACGATAAAAAATACCTGCCAACGTGCAGGTATTTTTTTGCCTGAAACTCTTTA ATCCATTGCGCACAAATGCT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MALISLRQMLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMAAALEQYPDIPVCI HQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEYNVDVTRRTVAFAHACGVSVEGEIGCLGSLETGMAGEEDGV GAEGILSHDQLLTTPEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE WLEIINQYGGAIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFDPRKFLKASMEAMADICTTRY EAFGCAGMASKIKPKSLQAMYKAYQSGELDPQIK
Sequences:
>Translated_354_residues MALISLRQMLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMAAALEQYPDIPVCI HQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEYNVDVTRRTVAFAHACGVSVEGEIGCLGSLETGMAGEEDGV GAEGILSHDQLLTTPEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE WLEIINQYGGAIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFDPRKFLKASMEAMADICTTRY EAFGCAGMASKIKPKSLQAMYKAYQSGELDPQIK >Mature_353_residues ALISLRQMLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMAAALEQYPDIPVCIH QDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEYNVDVTRRTVAFAHACGVSVEGEIGCLGSLETGMAGEEDGVG AEGILSHDQLLTTPEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQEW LEIINQYGGAIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFDPRKFLKASMEAMADICTTRYE AFGCAGMASKIKPKSLQAMYKAYQSGELDPQIK
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=330, Percent_Identity=34.2424242424242, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=33.1306990881459, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI1788072, Length=291, Percent_Identity=28.5223367697594, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789293, Length=363, Percent_Identity=23.1404958677686, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38441; Mature: 38310
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALISLRQMLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQ CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCHH FLKYLMAAALEQYPDIPVCIHQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEE NVDVTRRTVAFAHACGVSVEGEIGCLGSLETGMAGEEDGVGAEGILSHDQLLTTPEEAAR ECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHH FVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE HHHHHCHHEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLEIINQYGGAIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCCCC PRKFLKASMEAMADICTTRYEAFGCAGMASKIKPKSLQAMYKAYQSGELDPQIK HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALISLRQMLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQ HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCHH FLKYLMAAALEQYPDIPVCIHQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEE NVDVTRRTVAFAHACGVSVEGEIGCLGSLETGMAGEEDGVGAEGILSHDQLLTTPEEAAR ECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHH FVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE HHHHHCHHEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLEIINQYGGAIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCCCC PRKFLKASMEAMADICTTRYEAFGCAGMASKIKPKSLQAMYKAYQSGELDPQIK HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]