Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yjgM [H]

Identifier: 167622761

GI number: 167622761

Start: 1024177

End: 1025118

Strand: Reverse

Name: yjgM [H]

Synonym: Shal_0821

Alternate gene names: 167622761

Gene position: 1025118-1024177 (Counterclockwise)

Preceding gene: 167622762

Following gene: 167622760

Centisome position: 19.61

GC content: 47.35

Gene sequence:

>942_bases
ATGAATCAAGCTCAAGCTAATAACCCTTTTGCTGCTTCTCTGCTACGTCGCCTCTCTAGGCAACTTATCCGTCAACTCGG
TTTGTTAGGTGCTGCCTGCGGTAACCAGCCTCTCTCCCCAGTTCAAGCCCATACCCTAATTGAGTTAGGCGAAAACAGTT
ACTCAATTAAGCAACTCGCTGAAATCATCAATATAGACAAATCTAACGCAAGCCGAGCCGTAAGCCAGCTTGTAGAAAAA
GGGTTTGCTAAGTCGCAATCGAACCCGAAAGATAATCGTAGTTTAGTGGTACAAATTACCCCGAAAGGAAAGAAGCAGCT
GCTTCAGTTAAATAAGCAACAAAACCAGCAGTTCAGCGACATTATGGCCCAGCTCCCCGCAGAACATATTGCAGAGCTGG
AGCTCTCACTAAGGCGTTACAACAAAGCCGTGCTGCAGTCTAAGTCCCAGCAAGGCTATAGCATCAGAAGTATTACAAGC
GATGACAATGCACAGATGGCCCAAGTGATCCGTCAAGTGTCAGCCGAATATGGCCTAACAGCAGACAAAGGCTATGGCGT
AGCCGATAAAACTCTGGATAACCTGAGTGAGGTTTATCAAGCCCAGAATGCCCATTACTGGGTTATAGAGCTCGAGGGTA
AGATTTTAGGCGGCGCTGGCATCGCGCCATTGGTTGGACACCCTGACACCTGTGAATTACAGAAGATGTACTTCCTACCC
GAAGTACGCGGCAAAGGCTTTGCCAAGCGTCTAGCGCTGCAAGCTATTCGCTATGCTAATGTTCAAGGCTATACATCATG
TTATTTAGAAACCACCGCTAACCTTATTGAAGCTATAAAGCTCTATGAATCGCTAGGCTTTAAGCATCTCGACGGGCCAA
TAGGCAATACTGGCCATGATGCCTGTGAGATCACCATGTTACGTCCGCTGAGCGCTGGTTAA

Upstream 100 bases:

>100_bases
TTAATTAGTCTTTACTTTATTATTTTCATCTTAATACGCTTGATTTTGAAAAAGAGTCCTCGTAAGTTAGATGCTAATCG
CAACTAAATAAGAACTGTCG

Downstream 100 bases:

>100_bases
ACTATTTATCTGCTGAGGTATTCAAACTGCAGCTAAGTTAATGGTTTTTATTGGTAAAGCTTGCTAGCCTCAAAGTAAGT
GGTCTTCGCATATAAGTGAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLAEIINIDKSNASRAVSQLVEK
GFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSDIMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITS
DDNAQMAQVIRQVSAEYGLTADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP
EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHDACEITMLRPLSAG

Sequences:

>Translated_313_residues
MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLAEIINIDKSNASRAVSQLVEK
GFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSDIMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITS
DDNAQMAQVIRQVSAEYGLTADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP
EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHDACEITMLRPLSAG
>Mature_313_residues
MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLAEIINIDKSNASRAVSQLVEK
GFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSDIMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITS
DDNAQMAQVIRQVSAEYGLTADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP
EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHDACEITMLRPLSAG

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI48995002, Length=157, Percent_Identity=61.1464968152866, Blast_Score=174, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 34383; Mature: 34383

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH
EIINIDKSNASRAVSQLVEKGFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSD
HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
IMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITSDDNAQMAQVIRQVSAEYGLT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
ADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCC
EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHD
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ACEITMLRPLSAG
CEEEEEECCCCCC
>Mature Secondary Structure
MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH
EIINIDKSNASRAVSQLVEKGFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSD
HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
IMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITSDDNAQMAQVIRQVSAEYGLT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
ADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCC
EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHD
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ACEITMLRPLSAG
CEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253666; 11677609 [H]