Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622746

Identifier: 167622746

GI number: 167622746

Start: 1002450

End: 1003664

Strand: Direct

Name: 167622746

Synonym: Shal_0806

Alternate gene names: NA

Gene position: 1002450-1003664 (Clockwise)

Preceding gene: 167622745

Following gene: 167622749

Centisome position: 19.18

GC content: 48.23

Gene sequence:

>1215_bases
ATGGTTATGTTTCAAATTTTTCTACGTTTTTTCTCGTTAGGGTTAGTGTCATTTGGTGGACCCGCGGCGCACATCGGTTA
CTTTAGACAGACTTTTGTGCAGGAGCTTAATTGGCTCGATGACAAACACTATGGCAGTCTCGTTGCGCTAAGTCAGTTTA
TGCCTGGACCGGGTTCGAGTCAGGTGGGTTTTGCCATCGGTTATCATCGCGGTGGTCTGTTGGGCGCTATTGCTGCCTTT
ATAGGGTTTACCTTACCTTCGTTTATTCTATTGTTTTTGCTTGCCGTCACCAGTAGTCAATGGCTGGAATACTCATTTAC
TCAAGGGATTATCCACGGGCTTAAGTTATTGGCTGTAGTGGTAGTTGCTGATGCGATTTGGATCATGTTCAAGCAGTTTT
GTCAGCGTAAGCAGGCTAAATTATTGATGCTGCTAAGCTGCGCGATTATCTTGTTGCAGCCTTCGATGTTAGTGCAGTTT
GGCTTGCTCATCAGCGCCGCCATGGTGGGGCGATATTACCTATCTGCTGAGCCGGATGAGGGCGTGGCTACAACTGCAAC
GAAAGCCGCAACAAAAACCACAGTACAGCAACCGATAAAGCTTAACTTCTTTTGGTTAAGTCTCTTCAGTGGCTTATTGA
TCGCGTCATTGGTGGTTATCGGCCTATCTAAGCAAGCAGGGATCTCGAATTTAACTGAGTTGTTTAGCCAGTTCTACCAA
GTGGGTAGTATGGTATTTGGTGGTGGGCATGTGGTGCTGCCTCTACTACAATCGAGTGTTGGCGATACCATGAGTAACGA
TCAGTTTTTAACGGGGTACGCCTTAGCACAGGCGGTACCGGGGCCTATGTTTGCCTTGGCGGCATTTTTAGGGGCTGAGA
TCTGGGTGGAGCAGCCGTTAATTGGCGCCTTAGTAGCTACACTGGCTATCTTTCTGCCGGGCTTCTTACTCATGCTGGTG
GCACTTAAAAGCTGGCATGCACTCAGTGCAAGGCCACAAGTGATTGGCGCCGTTGCAGGAGTCAATGCCTGCGTGGTGGG
CTTCTTGTTGGCGGCGCTGTATAGCCCCATCTTTATCAGCGCAGTGTTATCGCCACTGGATATGGCCTTGGTAGTATTAG
GTTTTGGTCTGTTTAAAATCTTTAAGCCCAATATTTTTATCTTAGTGACAGGTTTTGGCGTGACAGGGGCGGTAATAGGC
GCGTTTGCTGGCTAG

Upstream 100 bases:

>100_bases
CAAGCTCATGAGTTTCATTATTCTGTAACCTTAGTGTCATATTCTTGATGGGTTGTTATTTTGAATAGTTTGTTTTTAAA
GTGCATGAGCGCACAGATGG

Downstream 100 bases:

>100_bases
CCTCCTTAGAGGTCCAGATAAATAAAAAGGCGGTAAGAGCATGCTCTTACCGCCTTTTTTGATCGACTATGATTCTAGCT
AGACGAGTTCTGCCTCGGCT

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MVMFQIFLRFFSLGLVSFGGPAAHIGYFRQTFVQELNWLDDKHYGSLVALSQFMPGPGSSQVGFAIGYHRGGLLGAIAAF
IGFTLPSFILLFLLAVTSSQWLEYSFTQGIIHGLKLLAVVVVADAIWIMFKQFCQRKQAKLLMLLSCAIILLQPSMLVQF
GLLISAAMVGRYYLSAEPDEGVATTATKAATKTTVQQPIKLNFFWLSLFSGLLIASLVVIGLSKQAGISNLTELFSQFYQ
VGSMVFGGGHVVLPLLQSSVGDTMSNDQFLTGYALAQAVPGPMFALAAFLGAEIWVEQPLIGALVATLAIFLPGFLLMLV
ALKSWHALSARPQVIGAVAGVNACVVGFLLAALYSPIFISAVLSPLDMALVVLGFGLFKIFKPNIFILVTGFGVTGAVIG
AFAG

Sequences:

>Translated_404_residues
MVMFQIFLRFFSLGLVSFGGPAAHIGYFRQTFVQELNWLDDKHYGSLVALSQFMPGPGSSQVGFAIGYHRGGLLGAIAAF
IGFTLPSFILLFLLAVTSSQWLEYSFTQGIIHGLKLLAVVVVADAIWIMFKQFCQRKQAKLLMLLSCAIILLQPSMLVQF
GLLISAAMVGRYYLSAEPDEGVATTATKAATKTTVQQPIKLNFFWLSLFSGLLIASLVVIGLSKQAGISNLTELFSQFYQ
VGSMVFGGGHVVLPLLQSSVGDTMSNDQFLTGYALAQAVPGPMFALAAFLGAEIWVEQPLIGALVATLAIFLPGFLLMLV
ALKSWHALSARPQVIGAVAGVNACVVGFLLAALYSPIFISAVLSPLDMALVVLGFGLFKIFKPNIFILVTGFGVTGAVIG
AFAG
>Mature_404_residues
MVMFQIFLRFFSLGLVSFGGPAAHIGYFRQTFVQELNWLDDKHYGSLVALSQFMPGPGSSQVGFAIGYHRGGLLGAIAAF
IGFTLPSFILLFLLAVTSSQWLEYSFTQGIIHGLKLLAVVVVADAIWIMFKQFCQRKQAKLLMLLSCAIILLQPSMLVQF
GLLISAAMVGRYYLSAEPDEGVATTATKAATKTTVQQPIKLNFFWLSLFSGLLIASLVVIGLSKQAGISNLTELFSQFYQ
VGSMVFGGGHVVLPLLQSSVGDTMSNDQFLTGYALAQAVPGPMFALAAFLGAEIWVEQPLIGALVATLAIFLPGFLLMLV
ALKSWHALSARPQVIGAVAGVNACVVGFLLAALYSPIFISAVLSPLDMALVVLGFGLFKIFKPNIFILVTGFGVTGAVIG
AFAG

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 43172; Mature: 43172

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]