Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622712

Identifier: 167622712

GI number: 167622712

Start: 959210

End: 960430

Strand: Direct

Name: 167622712

Synonym: Shal_0772

Alternate gene names: NA

Gene position: 959210-960430 (Clockwise)

Preceding gene: 167622711

Following gene: 167622713

Centisome position: 18.35

GC content: 51.11

Gene sequence:

>1221_bases
ATGAGCAGTAACTTACACCAAGCTGGTGTTAAGCTGCTAAAACAGCTTGGACGCCATGCAGAGTTGGTGATGGACGTTTA
TCTGTCGGGCTCAGTATCGGTCGATGAGAGCAACGCTGCAGCCATCGATAAGCTACAGAAAAGCGATATCCTGTGGCGAC
CAGAGCCTGAGCAGGAGCTACGTCTTAAGCGCTCGGTGCGGGCCCTGCTTGAGGAAGCCTTAAGCGATGAGCGTAACCGT
CAAATCGATTCTAATGTGGGCTCATCACTTGCGACCATCAAGACCTTGGCCGACCACTATAAAGAGGCGCGCCATAATGT
GGATTTCAGTGCCTCAGAGGCTTATCTTGCCGACTTGAGCGAGCATGTTTATAGCTTCGCCGATGGACTGCGTTACTCGA
TTCGTGTGCTGTGGAGCCGTATCAACAACGAGTTTGGTTATGTGGGCAGTATCAATGCCAAAATTCGTGAGAACGAGTTG
GCTCAGAGTCAGGTGACAGAGCTGCTAAACGGTCTTGAGATGTTTCAGTTTAGCGAACTCGGTGAGATAGCCGGTGATAT
TCGCGAGTTAAGAAAGCTGCTGGTGACGACCTTGCAAGAGACCTTGAGTGATTGTACTCAGGAGCTGAGTGTAGTGCAGG
CGCGTTTGCTAGAACTATTGGGACGTTTCCGCCAAATTCGTGGCCGTACTCGATTACTAAAAGGTTGGTTGCTCTATACC
GACCTGCATCCAGACTATCGTCCTGCGGACCATGTCAGTCACAAGCAACTGCCGGCGCTATTTAATATCGCCGAGCGCCT
TCTGGCTCCGGCTGCCGTGGACGTGCATAACCATAGCCTGGAGTCTGAGCTGTTTGAGGTAGTCTCTAACATTAAGCGCA
TCGACCGCTTAAATGAGGTGAGCAGTCAGCGTGAGCATGATGTCTCTGTAGACCTAACCCAAGTGGAAGATTTCGATATT
CCGGATAACCCGCTCAAGCTGGCGGTTGATGGTTATTTCTGCGCGGTCATCGACTCGGGTAAGAGTCAGTCGGCGCTGGA
TTACCTCGATGAGCATCAGCTCGCTTGGGATCGAGAGTCATGGTTGTATCAGGTGATCTGCGGCTATGAGGGACTGCCTG
AAGAGCATCGTAGTTACTTCGAGCTTGAGCATATCGGTGAGCCTGACCCAGTCTATAGTGGTAACTTTATCATCAAAGAT
GTGGAGCTGTGGTTGGCGTAA

Upstream 100 bases:

>100_bases
TTAGATTATCTGTATGAGGTGATCCGCTTTATCGACGAGACCGAAGGCTTAAGTCTTGAAGCGCAGGCCGAGACCGCAAC
TCAAAGGGATCTGATCTAAT

Downstream 100 bases:

>100_bases
TAACCTGTGTTTAGCGTGGGCTAACAGGCTTTAACTTATGGCGATGGGGTCTGTAAATGATACAAAAAAAGCACCTTTTA
AAGGTGCTTTTTTTATGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSSNLHQAGVKLLKQLGRHAELVMDVYLSGSVSVDESNAAAIDKLQKSDILWRPEPEQELRLKRSVRALLEEALSDERNR
QIDSNVGSSLATIKTLADHYKEARHNVDFSASEAYLADLSEHVYSFADGLRYSIRVLWSRINNEFGYVGSINAKIRENEL
AQSQVTELLNGLEMFQFSELGEIAGDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIRGRTRLLKGWLLYT
DLHPDYRPADHVSHKQLPALFNIAERLLAPAAVDVHNHSLESELFEVVSNIKRIDRLNEVSSQREHDVSVDLTQVEDFDI
PDNPLKLAVDGYFCAVIDSGKSQSALDYLDEHQLAWDRESWLYQVICGYEGLPEEHRSYFELEHIGEPDPVYSGNFIIKD
VELWLA

Sequences:

>Translated_406_residues
MSSNLHQAGVKLLKQLGRHAELVMDVYLSGSVSVDESNAAAIDKLQKSDILWRPEPEQELRLKRSVRALLEEALSDERNR
QIDSNVGSSLATIKTLADHYKEARHNVDFSASEAYLADLSEHVYSFADGLRYSIRVLWSRINNEFGYVGSINAKIRENEL
AQSQVTELLNGLEMFQFSELGEIAGDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIRGRTRLLKGWLLYT
DLHPDYRPADHVSHKQLPALFNIAERLLAPAAVDVHNHSLESELFEVVSNIKRIDRLNEVSSQREHDVSVDLTQVEDFDI
PDNPLKLAVDGYFCAVIDSGKSQSALDYLDEHQLAWDRESWLYQVICGYEGLPEEHRSYFELEHIGEPDPVYSGNFIIKD
VELWLA
>Mature_405_residues
SSNLHQAGVKLLKQLGRHAELVMDVYLSGSVSVDESNAAAIDKLQKSDILWRPEPEQELRLKRSVRALLEEALSDERNRQ
IDSNVGSSLATIKTLADHYKEARHNVDFSASEAYLADLSEHVYSFADGLRYSIRVLWSRINNEFGYVGSINAKIRENELA
QSQVTELLNGLEMFQFSELGEIAGDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIRGRTRLLKGWLLYTD
LHPDYRPADHVSHKQLPALFNIAERLLAPAAVDVHNHSLESELFEVVSNIKRIDRLNEVSSQREHDVSVDLTQVEDFDIP
DNPLKLAVDGYFCAVIDSGKSQSALDYLDEHQLAWDRESWLYQVICGYEGLPEEHRSYFELEHIGEPDPVYSGNFIIKDV
ELWLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46273; Mature: 46141

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNLHQAGVKLLKQLGRHAELVMDVYLSGSVSVDESNAAAIDKLQKSDILWRPEPEQEL
CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHH
RLKRSVRALLEEALSDERNRQIDSNVGSSLATIKTLADHYKEARHNVDFSASEAYLADLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EHVYSFADGLRYSIRVLWSRINNEFGYVGSINAKIRENELAQSQVTELLNGLEMFQFSEL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIAGDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIRGRTRLLKGWLLYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DLHPDYRPADHVSHKQLPALFNIAERLLAPAAVDVHNHSLESELFEVVSNIKRIDRLNEV
ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SSQREHDVSVDLTQVEDFDIPDNPLKLAVDGYFCAVIDSGKSQSALDYLDEHQLAWDRES
HHHHHCCCCEEEEECCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHCCHHH
WLYQVICGYEGLPEEHRSYFELEHIGEPDPVYSGNFIIKDVELWLA
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCC
>Mature Secondary Structure 
SSNLHQAGVKLLKQLGRHAELVMDVYLSGSVSVDESNAAAIDKLQKSDILWRPEPEQEL
CCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHH
RLKRSVRALLEEALSDERNRQIDSNVGSSLATIKTLADHYKEARHNVDFSASEAYLADLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EHVYSFADGLRYSIRVLWSRINNEFGYVGSINAKIRENELAQSQVTELLNGLEMFQFSEL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIAGDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIRGRTRLLKGWLLYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DLHPDYRPADHVSHKQLPALFNIAERLLAPAAVDVHNHSLESELFEVVSNIKRIDRLNEV
ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SSQREHDVSVDLTQVEDFDIPDNPLKLAVDGYFCAVIDSGKSQSALDYLDEHQLAWDRES
HHHHHCCCCEEEEECCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHCCHHH
WLYQVICGYEGLPEEHRSYFELEHIGEPDPVYSGNFIIKDVELWLA
HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA