Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622711

Identifier: 167622711

GI number: 167622711

Start: 958555

End: 959208

Strand: Direct

Name: 167622711

Synonym: Shal_0771

Alternate gene names: NA

Gene position: 958555-959208 (Clockwise)

Preceding gene: 167622710

Following gene: 167622712

Centisome position: 18.34

GC content: 49.39

Gene sequence:

>654_bases
ATGAGCCAAGCAACCGAAACCACTATCGTTGGCACTAGCGCCCTTATTGAACGTTTGCTTAAAGGTCAGTTTATCTGTCG
CACTACAGATGAAGACGGCTGGCGCGCACTGAAAAGCCCCTCGACTCGTGAACATGTTGAGCAGTATCTGAATCAGATCA
ACCGCACCATCGGCTCGGCAGGCGAAGGTGAAGTGTTCTTCTGTGGTTATCAACAGCTAGGTGATAGCGAGCGTAAGGTG
ATCTCATCGCAGTTTAAAGATATCTGTAACGCGCTTATTCCGTTGGTGGAGTGGTTAGTGCTGGTGCAAGAGGGCAGTGG
TCAAGATGCGCCGCTATCTGAAGGCGTCGCCGTGCGTTTAACTGAGCTGCAAACCCGTATCGAAGATACCCCTGCGTTTC
GTGAGCAGTTAGCAAAAATCAGTCATTACCGCCTATTTGGCTCTACCAGTACTAACGTGGATGCCCAGATAAAGCTGGTA
TTTAAACGCTTAGTGGAGCTGGGTTATCTGACTCGTCCCAACAGCGAGAAGCAAATTTATATCGCCACCGGTAAGTTAGA
TTATCTGTATGAGGTGATCCGCTTTATCGACGAGACCGAAGGCTTAAGTCTTGAAGCGCAGGCCGAGACCGCAACTCAAA
GGGATCTGATCTAA

Upstream 100 bases:

>100_bases
ACATCATCAATAAACAAACCAAGAAACTGCAGGTGGTTAAGCCTCAAGTTAATCCTATCGCCGAAAAACTTAATCAGCGA
CGCACTCAGGAGGCCGTGTA

Downstream 100 bases:

>100_bases
TATGAGCAGTAACTTACACCAAGCTGGTGTTAAGCTGCTAAAACAGCTTGGACGCCATGCAGAGTTGGTGATGGACGTTT
ATCTGTCGGGCTCAGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSQATETTIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSAGEGEVFFCGYQQLGDSERKV
ISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRLTELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLV
FKRLVELGYLTRPNSEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI

Sequences:

>Translated_217_residues
MSQATETTIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSAGEGEVFFCGYQQLGDSERKV
ISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRLTELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLV
FKRLVELGYLTRPNSEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI
>Mature_216_residues
SQATETTIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSAGEGEVFFCGYQQLGDSERKVI
SSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRLTELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLVF
KRLVELGYLTRPNSEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24398; Mature: 24267

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQATETTIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSA
CCCCCCHHEECHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
GEGEVFFCGYQQLGDSERKVISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRL
CCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
TELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLVFKRLVELGYLTRPNSEKQIY
HHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
IATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI
EEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC
>Mature Secondary Structure 
SQATETTIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSA
CCCCCHHEECHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
GEGEVFFCGYQQLGDSERKVISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRL
CCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
TELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLVFKRLVELGYLTRPNSEKQIY
HHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
IATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI
EEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA