| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622704
Identifier: 167622704
GI number: 167622704
Start: 947171
End: 947608
Strand: Reverse
Name: 167622704
Synonym: Shal_0764
Alternate gene names: NA
Gene position: 947608-947171 (Counterclockwise)
Preceding gene: 167622705
Following gene: 167622703
Centisome position: 18.13
GC content: 50.0
Gene sequence:
>438_bases ATGGATGTTAAGATGAACATAGACGTGCTCCACGAAGAGGCTCCCGCAATCTTTGATGCCTTGGTCGATGGCGTTCGGCA GCATAACTTTGCCCATATGGGACCTGAATCCTCCAAGCCGCTAGCGGTTGTGGCTCATGATGGTGATAATAATGCCAGTG GCAAGTTGATTGGCGGTGTCGCGGGGTGCACTATCTATGACAACTTCTTGATTAACGTGGTGTGGGTCGATGAAAGCGCC CGAGGCACAGGACTTGGTCGCGATCTTATGCAGCGAGCCGAAGTTGAAGCCAAGCAGCGAGGCTGCACCATGGCACAACT CGATACCCTCTCCTTTCAGGCACCGGTTTTTTATCAAAAACTCGGCTTTGAAATTATCGGTACTGTGCCAAGCACAGCAA AAAGTCCAGAGCGCTATTTCTTATTGAAGAGGTTTTAA
Upstream 100 bases:
>100_bases TAGAGCCTTCTTTAATTGTAGGTCGGCATTTATGCCGTCATTCTTGATGGGCTAAAGCCCAACCTACATCAAAAAGCAGA GCCAAACTAAAACAATAAAA
Downstream 100 bases:
>100_bases AAATTAAAAGAAGGACCTAGGTTCTAGGTCCGAGGAAAAGCAAAGACGATATAGGCTAAGCCGAGAAAGACCGGATAAGA GCCGATAAAAACAAAGACGA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; Blasticidin-S Acetyltransferase; Acetyltransferase Protein; GNAT Family Acetyltransferase; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Pantoate-Beta-Alanine Ligase; Histone Acetyltransferase Protein; Histone Acetyltransferase HPA2-Like Protein; Gcn5-Related N-Acetyltransferase; Blasticidin S-Acetyltransferase
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDVKMNIDVLHEEAPAIFDALVDGVRQHNFAHMGPESSKPLAVVAHDGDNNASGKLIGGVAGCTIYDNFLINVVWVDESA RGTGLGRDLMQRAEVEAKQRGCTMAQLDTLSFQAPVFYQKLGFEIIGTVPSTAKSPERYFLLKRF
Sequences:
>Translated_145_residues MDVKMNIDVLHEEAPAIFDALVDGVRQHNFAHMGPESSKPLAVVAHDGDNNASGKLIGGVAGCTIYDNFLINVVWVDESA RGTGLGRDLMQRAEVEAKQRGCTMAQLDTLSFQAPVFYQKLGFEIIGTVPSTAKSPERYFLLKRF >Mature_145_residues MDVKMNIDVLHEEAPAIFDALVDGVRQHNFAHMGPESSKPLAVVAHDGDNNASGKLIGGVAGCTIYDNFLINVVWVDESA RGTGLGRDLMQRAEVEAKQRGCTMAQLDTLSFQAPVFYQKLGFEIIGTVPSTAKSPERYFLLKRF
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15884; Mature: 15884
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKMNIDVLHEEAPAIFDALVDGVRQHNFAHMGPESSKPLAVVAHDGDNNASGKLIGGV CCEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECE AGCTIYDNFLINVVWVDESARGTGLGRDLMQRAEVEAKQRGCTMAQLDTLSFQAPVFYQK ECCEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH LGFEIIGTVPSTAKSPERYFLLKRF CCCEEEECCCCCCCCCCEEEEEECC >Mature Secondary Structure MDVKMNIDVLHEEAPAIFDALVDGVRQHNFAHMGPESSKPLAVVAHDGDNNASGKLIGGV CCEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECE AGCTIYDNFLINVVWVDESARGTGLGRDLMQRAEVEAKQRGCTMAQLDTLSFQAPVFYQK ECCEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH LGFEIIGTVPSTAKSPERYFLLKRF CCCEEEECCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA