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The map label for this gene is yadH [H]

Identifier: 167622687

GI number: 167622687

Start: 928075

End: 928851

Strand: Direct

Name: yadH [H]

Synonym: Shal_0747

Alternate gene names: 167622687

Gene position: 928075-928851 (Clockwise)

Preceding gene: 167622686

Following gene: 167622696

Centisome position: 17.76

GC content: 48.52

Gene sequence:

>777_bases
ATGAACATGAAGGCGCTGTATTTCACGGCTTTTAAAAGTATTTTAACCAAAGAGATTAACCGTTTTACCCGTATCTGGGT
GCAAACTTTAGTGCCGCCTGCGATCTCTATGACCTTGTATTTTTTGATCTTCGGTAACTTGGTCGGCAAGCGTATCGGTG
ATATGGGCGGCGTCTCCTATATGGAGTTTATCGCACCCGGTCTTATCATGATGGCGGTGATCACAAGCTCTTACTCTAAT
GTGGCCTCCTCATTTTTCAGCGCTAAGTTTCAGCGCAATTTAGAAGAGCTGATCGTGGCGCCCGTACCGCATTATGTGAT
TATTGCAGGTTATGTTGGCGGCGGTGTCGCACGCGGCCTATGCGTGGGCGCTATCGTTACCATGGTGGCAATGTTCTTTG
TCGATATTAGTATCCATCATGTAGGCTTAGTGATGGTGACCGTGCTACTCACGGCGATACTGTTTGCCTTAGGTGGCTTA
ATCAATGCGGTATTTGCCAAGACTTACGATGATATCAGTATCGTACCGACCTTCGTGCTCACGCCGCTAACTTATCTGGG
CGGTGTGTTCTACTCGCTGTCTCTGCTACCCGATTTCTGGCAGGGCGTGTCGGCGCTAAATCCCGTCGTTTATATGATTA
ACGTATTCCGCTATGGCTTCTTAGGATACGCCGATATTAGCGTGCCTTTATCCGTTGCTGTGATGGTGGGATTCTGTGTC
GGTCTGTGGAGTGTGGCGTACTACTTGATCTCTCGTGGTATCGGCCTTAGAAGCTAG

Upstream 100 bases:

>100_bases
AGCTAGGTATTCAGGTGCTATCGATGCGCAACAAGGCAAACCGTTTGGAAGAGTTGTTTGTTGAGCTAGTTGAGAAAGGT
AAGCATGGCGGAGATGTGAA

Downstream 100 bases:

>100_bases
CTTTATTTCGTAATTATTTCTTCTCTAGAAACCAACAGCTTGCTGTTGGTTTTTTTATGTGTCGCTTAAATAGGCTTATA
CCCATTGCATCTGCGTGTGT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNMKALYFTAFKSILTKEINRFTRIWVQTLVPPAISMTLYFLIFGNLVGKRIGDMGGVSYMEFIAPGLIMMAVITSSYSN
VASSFFSAKFQRNLEELIVAPVPHYVIIAGYVGGGVARGLCVGAIVTMVAMFFVDISIHHVGLVMVTVLLTAILFALGGL
INAVFAKTYDDISIVPTFVLTPLTYLGGVFYSLSLLPDFWQGVSALNPVVYMINVFRYGFLGYADISVPLSVAVMVGFCV
GLWSVAYYLISRGIGLRS

Sequences:

>Translated_258_residues
MNMKALYFTAFKSILTKEINRFTRIWVQTLVPPAISMTLYFLIFGNLVGKRIGDMGGVSYMEFIAPGLIMMAVITSSYSN
VASSFFSAKFQRNLEELIVAPVPHYVIIAGYVGGGVARGLCVGAIVTMVAMFFVDISIHHVGLVMVTVLLTAILFALGGL
INAVFAKTYDDISIVPTFVLTPLTYLGGVFYSLSLLPDFWQGVSALNPVVYMINVFRYGFLGYADISVPLSVAVMVGFCV
GLWSVAYYLISRGIGLRS
>Mature_258_residues
MNMKALYFTAFKSILTKEINRFTRIWVQTLVPPAISMTLYFLIFGNLVGKRIGDMGGVSYMEFIAPGLIMMAVITSSYSN
VASSFFSAKFQRNLEELIVAPVPHYVIIAGYVGGGVARGLCVGAIVTMVAMFFVDISIHHVGLVMVTVLLTAILFALGGL
INAVFAKTYDDISIVPTFVLTPLTYLGGVFYSLSLLPDFWQGVSALNPVVYMINVFRYGFLGYADISVPLSVAVMVGFCV
GLWSVAYYLISRGIGLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=67.578125, Blast_Score=348, Evalue=1e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28146; Mature: 28146

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]