Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is bluB [H]

Identifier: 167622681

GI number: 167622681

Start: 921968

End: 922639

Strand: Reverse

Name: bluB [H]

Synonym: Shal_0741

Alternate gene names: 167622681

Gene position: 922639-921968 (Counterclockwise)

Preceding gene: 167622682

Following gene: 167622680

Centisome position: 17.65

GC content: 46.13

Gene sequence:

>672_bases
ATGAGCCGACAATTTACGTTAGATGATAGCCAGTTACTCGCCGACATTATTCAGCTAAGACGCGATGTGAGAGGTAATCG
CTTTCTATCAAAGCCCATCGATGATGACACTTTAGATAAACTACTCGATGCCGCACTCAACGCCCCTTCCGTTGGTTACT
CTCAACCTTGGCAGTTTGTGGTGATCCGCGAAGATGCCGTTAAACGGCAAGTGCATCACTCTTTTATTGAAGAAAATGCC
TCAGGTGCAAAACTGTTTAATGGTGAAAAACAGAGGCAATATCAAAACTTGAAGCTTGAGGGGATCTTGGAAGCCCCGGT
CAACCTCGCGATTTTTTATCGACCTAAACCGGGTGCGGTACTGGGACAAACTAGCATGGCTGACATGGGCCGATTTAGCG
TGGTATGCGCCATTCAAAATCTGTGGTTGATGGCTCGTTCACTCAATATCGGAGTCGGCTGGGTCAGCATTATCGACCCA
GAGTCGGTAAAAAAGATCCTCAACGCACCTCAAGATGCCGAACTTATTGGCTACCTCTGCATAGGTTATGTTGAAGATTT
TCTGGCCGAACCTGAGTTAAAAACCCTTGGATGGGAAAAACAAAAAACCAAGAGCCAAGTGATATTTAAAGAGACCTTTA
ATTCGTCTTGCACGGAGGGGCAAAGCGCTTGA

Upstream 100 bases:

>100_bases
CTACCGCTGATTTAGCTGCATATTACAGCTAATACGGATATGCTTTAGGCGCCCTAATGGGTGCCTTTTTTATGCTTGCC
CTTTCACGATAGAGACAAAT

Downstream 100 bases:

>100_bases
TGCGGGCAACACCAAAAAAATCATAAAAAAAAACTCTTTTTTTAAAAGGCTCCGTTTGTACTAAACAAGACAAGCAACTA
ATACTTATAATCAGTTTTTA

Product: cob(II)yrinic acid a,c-diamide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFVVIREDAVKRQVHHSFIEENA
SGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAVLGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDP
ESVKKILNAPQDAELIGYLCIGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA

Sequences:

>Translated_223_residues
MSRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFVVIREDAVKRQVHHSFIEENA
SGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAVLGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDP
ESVKKILNAPQDAELIGYLCIGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA
>Mature_222_residues
SRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFVVIREDAVKRQVHHSFIEENAS
GAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAVLGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDPE
SVKKILNAPQDAELIGYLCIGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA

Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012825
- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: =1.16.8.1 [H]

Molecular weight: Translated: 25036; Mature: 24905

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
VIREDAVKRQVHHSFIEENASGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAV
EECHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCEEEECCCCEEEEEEECCCCCE
LGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDPESVKKILNAPQDAELIGYLC
ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHH
IGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA
HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
VIREDAVKRQVHHSFIEENASGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAV
EECHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCEEEECCCCEEEEEEECCCCCE
LGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDPESVKKILNAPQDAELIGYLC
ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHH
IGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA
HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635831; 9256491 [H]