| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is barA [H]
Identifier: 167622660
GI number: 167622660
Start: 890984
End: 896269
Strand: Direct
Name: barA [H]
Synonym: Shal_0720
Alternate gene names: 167622660
Gene position: 890984-896269 (Clockwise)
Preceding gene: 167622651
Following gene: 167622661
Centisome position: 17.05
GC content: 47.71
Gene sequence:
>5286_bases ATGAGCAGACTTCGCACCTTTCGTAGCCGAATTTTATCGCAAATAGCCTTGCCTTTGATTGCAATTATGGCTGCCGTTTC TAGCGTTAATGCTTGGATTAATTTTCAAGATGAAGAGCAAGATATCTATCAGCATATCGGGAAAATTGCCGAAAATGCAG CCTTGAGATTAGATCATTTTCTTGTCACCGCTGAAACCGATACCCGCTCATTTGCCGAGCTGCTGACCGAGATGGGGAGT CGAGAGGAGTTGGCCGACAAAGCAAAGCTTCAGCTGCTGTTAAGCCACCGTCTCGAACGCCATAGCGATTTTTACGGCAG TGCAATTGCGTTTCAAAAGTTTTTTGTCGAGGGACGTGAACTGTTTGCGCCTTACGCTTATCGTGATAAATCCAAGATTA GCATGATAGATATCGGTGTTGAGGGTTACGATTACACTAATGGTGAGTGGGGTTGGTGGAGTCAAGCTATTGATAATGAA GATGGTTACTGGTCACAACCCTATTTAGATGAAGGTGCTGGGAATGTCTTAATGGTGAGCTTCTCGCAACCATTTGGTGA GCCGCGGCCTTTTTTGGGGGTAGTGACTGTCGATCTTGCCCTTAACTCTATTCCACAAATGGTGGGGAACTCAGCAAATC GCATTGTGGTTATCGATGACAAAGGTCAGCTAATTTATCATCAAAATAACGACTTATTGCTTAAGAATGGGGTCGATAAC TGGCTCTCCCAGTCAAAAGAAAACCAAAAATTTATCGATTTAGTTCACCGTGGTAAACCGGGTTACGCCTATATAGAAGA CAGCATTGGGGGAAAATACCTTGCCAGTATCGGGGTGGTTCCAGCCTTGAACTGGCGGGTGGTTATCATGACTTCCGAGC AACTACTTTATGACGAGTTTTTTCGTGATATAGCCTCATTGAGTCTCAACTTACTATTACTTTCAGTCTTACTTTTATTG ACTGGGTATATTACTGCTAGACGCTTAACTCGACCGATTGAAGAGTTAGAAGCTGGCATTGTCGCTTTTGGTGCTGGAAA AACTAAACGGATTGAAAAGCCAATTGGTGCGATGAGCGAAATCGCTACCTTAACGGATAAATTCAATGATATGGCTGAGG TGTTGGAGGAGCGGGAAGAGGCGCTGCTGGACTCTCGTGGCAATCGTTTTGCCAAGTTGATCGATGGTATGAGTGATAAG TCTTTCTACTGTTCTGTGGCTCCAAATGGAGTGATTGATCAAGTGAGTGATGGCGTTGAAAAGGTATTGGGGGTCACCCC TGAACTCCTCAAGCGTAAGTATCAAAGGATGTTTTCTGACAATCCCATTAACGAGTTAAATTGGCAGTATATGGACAAGG CTCTGCTTGGTGAGAATGTGCCGCCGCACCAGATAGAGATGATCGATGGTTTCGGTAAGCTCCGCCGCTTGGATCTGTTT ATGCAGCCTCTGCTATCTGACAATCGGGAACTGCTTTCGATTGAGATGCTATTTAATGATGTGACTGAGCAGTTCTCTGC CGTCGCTTGGTCAAATGCGGTACTCGAGTCTGCACCAGAGGCGATGCTGATTGTCGAAGAATCGGGACAGCTGGTGTTTA CCAACAGTCGCTGCCAACAGCTGTTTGGTTACGATAAGCAGCAGATGTTGGCGATGTCAGTGGATGAGTTAGTTCCCGAC GGTGTTAGGTATCGACATGCTGCATTGCGAACTCAGTTTATAGCGGAGGGACGCGATCGCAAGATGGGCAAGGGGCAGAC GCTTAATGCGCGTAAGAGTGACGGTAGTGAGTTTCCTGTAGAGATAAGTTTAGGCTTGCTGCCAGTAACCGATGATGGCA AGCGTCAAGTGGCAGCAACGGTTAGAGACATGACGGTTGAGCTTGAGGTTGCTCAGCGGATAAAAGATAGCGAAAGTCGC TTTAGAGGCTTAGTGACTAATATTCCTGGAGCTGTCTACCGCACTCGGATCGGCGAGAGCTGGGTGATGGAGTATATCAG CAATAATATTAGTGATATTACTGGATTTCCCGCATCGGACTTTATTGAAAATAGCAGTCGTAGTTTTGCTAGTTTGATTA TCGAGCAAGATCTTGAGGCCACAACTCGTACTATTGAGGAGGCACTGCTAGCGCAAAAAAGCTTCGAAATTCAATATCGA ATCAAGCACCGAGACGGCAGTATCCATTGGGTCCATGAGAAAGGTAAGGCGAGTTACGGTGATGAGGGGGGCGTGCTTTG GTTCGATGGCAGTATTAATGACATCACCAGTAGTAAGTTAGCTCAAGAGGAGATCGTCCAGTCTCAACAGCAGCTGGAGA CGATTACCGAATCGATACCAAGTACGGTTTACCAGTTGCATTGGTGCAGTAGCGGTGAGCGTACATTTACCTTCCTATCT AGTGCCTGCATCACCACCTTAGGCTTTCACCGTGACGAAGTCATGAATGATTTTGACTTAGTTGCCGAGTGTATTATCAG CGAGGAGCGCTCGCATATTATTGAGGCGCTCTCGGGCCAAACGAGTAAAGGGCTGCAGTGGACCGAAGAGTTTAGGTACC GCCACCCGATTGGTGAGATCCGCTGGCTTCAAGCTGGCGCTCGCGGAGATCTGCAGGCCGATGGTTGTATTATCTGGAAC GGTTACTTAATGGATATTACTGATCGCAAACAGATTGATAAGGAGTTAGAAGATCGTGAGGCTCACTTTAGAGCACTTTT TGATAATGCGGGGATCGGTATCGTCAATGTCGATGAGCGCGGTAATATTCTCGACTGCAACGAGCAATTTAGCTTTTATA TGCAGACAGGTGTAGCCGAATTAAAGAGTTGCTCTTTCTTTGATTTTCAACACCTAGATGATCGTGAAAAGGCTAGAGAA GTATTTGCCGACCTTACCGAGGGTGGCAGTGATAATCTGCTCACCGAGCTACGATTGCTAAACCAATCGGGTGAGTGTAT CTGGATGGATATCACCCTGACTAAGCTGCAAGATCCTCAAGGCAAGTTAACCTCTGTTGTGCTGTCTATGGCCAATATCA CTTCGCTGAAACAGCTTTCAGAAGAGCTAAAGCAGGCTAAAGACAGTGCCGATGCGGCCAATCAGGCAAAGAGTGATTTC TTAGCCAATATGTCTCACGAAATTCGCACCCCGATGAATGCCATCATTGGTATGTCACAGCTCTGCTTGCAGACTGAGCT GAACAGAAAGCAGCAAAACTATGTGCTGAAAATTGATAGAGCCTCTAAGTCTTTGCTGGGGATCATTAACGATATTCTGG ACTTTTCTAAGATAGAGGCAGGCAAGCTCGATATCGAGTCAGTCCCCTTTCAGCTCGATACCCTGCTCGAAGACTTGAGT GACATGTTCTCGGTCAAGGCAACCGATAAGCGGCTAGAATTGCTCTTCGCGGTTGCTCCTAATATTCCAAGGCAGTTGCA GGGCGATCCACTGCGCCTAAGTCAGGTGCTTATCAACCTAATGAGTAACGCCATTAAGTTTACCGAGCAGGGAGAGGTGC TGCTGTCCATCAGTCAGCTAGAGCGCATCGAAGATGACATCGTGCTTAGATTTAGTGTGCGAGATAACGGTATAGGTCTC ACCGAAGAGCAGCGTGAACGACTGTTTAAGTCCTTTAGCCAAGCGGATACCTCAACCACTCGAAAGTATGGCGGCACAGG GCTAGGTTTGGCTATCAGTAAGCAGCTCGTGGAACTGATGGGCGGCGAGATTGGTGTTGAAAGCCAGTTTGGCAATGGTA GTAGCTTCTACTTTAGCGTGAAGCTGAAGGTTGCCAATAATCAGCTGTTAAAAGTGAAACGTGAGATTGAAGGGATGCGG ATCTTGGTGGCGGATGATAACGCTACCGCTCGAGATATTATGCGTACCACCCTTGAGAGCATGGGCTTTAAGGTCGATGC CGTTAAGAGTGGTGCCGAAGCGATTGAGCATTGTCAACATACTGACTATCCGGTGGCGCTGATCGATTGGTTAATGCCGG AGATGAATGGAATCGAGGCCGCGCAGAAAATTCTATCTGGGAAAGAACATCCCCCCAAAATATTGATCGTCTCGGCCCAT GCCAATGCCGAGTTTATCGAGCAGGTAGAGCACAGTGACATAGCCAGTTACATCACTAAACCCATCAGTGCTTCGCGCTT ACTTGACGGTATCATGTCTTCGCTCGGCCAAAATGGCGCAATGGTGGTTCGTCGCAAAGGGAGCGACATCAGCCAAGAGT TGCTTTTGCAGTTGCAGGGCAAGCGAGTTTTGTTGGTTGAAGACAATGATATGAATCAGGAGGTGGCCACCGAATTTCTT GAGCAGGTTGGGGTGGTGCTATCTATCGCCGAGAACGGTCAAGTGGCACTGGAAAAACTGGCAACGCAAAGCTTCGATCT GGTGCTGATGGATTGTCAGATGCCGGTGATGGATGGTTATCAAGCCACGCGAGAGCTAAGGAAAATGCCAGGGCTAGAAA AGTTACCAGTAATTGCTATGACGGCGAATGCGATGGCAGGCGACAAGGAGATGTGTCTGCGAGTAGGCATGAATGACCAT ATCGCCAAACCTATTGAGGTGGCGAGACTCTATAGCACCTTGCTGCAGTATTTAGGCGATAGTCAGCAGGCCATTACGCT TACCAACTTAGACGGTAAGGAGAGCGAAAATGTGCCGTTTTGGCCGCAGCATGAGGCGTTAGATATCGACAAAGGTTTGC AGCTGGTACAGAACTCTGTGCGGCTTTATCGCAGGATCTTGGAACGTTTCCATAGTGGTAAAAGTAATATCGCCGAGGAG ATAGAGTCAGCGCTTAGCCAAGGTAAGACCGCTGACGCGATCCGCTATGCCCATACCCTTAAAGGCGTGTCTGGTAATTT GTGCTCGCCTCTATTGGTCGATCTAGCCAGTCAGCTTGAGGCTAAGCTGCAAGACTCACCAAAGGCAGATGTGACAGATG AACTGAGTCAGATAGCCGAGCTAACGACATCGATATGTGCGGCAATAGCGAGCTGGCAGGCGAGTTTGGATGACGCTGTT GAGGTCGAGGCAAGTGGCGCACCAGAGTCTTTGTTGTCGGATAAGGAACTAAGTCAGGAAGTGACACAGCTATTACAGAT GCTAGAGGAGGCTGACTCCGATGCGGTTGATAAAATGAATGACATCAGGGAGCGAGTCACTGAATTGCAATGGCAGAAGA TGAGCCCTGCAGTAGCCATGGTTAACAGCTACCAGTTTGATGAGGCGGCAGAGCTGATTCAAGAGCAGTTTAAAGACAGG TCGTGA
Upstream 100 bases:
>100_bases GAGTTATTTTAGGTAAGGCATGCGATGGGCCGTTTAATGTGAGAATAAGGCCGCTCTTTGCTGTAAGCCAATAAAACGTT AGTCACTATGGATCAGGGAT
Downstream 100 bases:
>100_bases CAGTAAAAATATCATAGGTAACCTAAGCTGTTTTAGTGCCAAGCATAATAAGCGAGCAGCTATACTTGATTGCTAGCGTG AATACTAAAAGGAGAGATGG
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1761; Mature: 1760
Protein sequence:
>1761_residues MSRLRTFRSRILSQIALPLIAIMAAVSSVNAWINFQDEEQDIYQHIGKIAENAALRLDHFLVTAETDTRSFAELLTEMGS REELADKAKLQLLLSHRLERHSDFYGSAIAFQKFFVEGRELFAPYAYRDKSKISMIDIGVEGYDYTNGEWGWWSQAIDNE DGYWSQPYLDEGAGNVLMVSFSQPFGEPRPFLGVVTVDLALNSIPQMVGNSANRIVVIDDKGQLIYHQNNDLLLKNGVDN WLSQSKENQKFIDLVHRGKPGYAYIEDSIGGKYLASIGVVPALNWRVVIMTSEQLLYDEFFRDIASLSLNLLLLSVLLLL TGYITARRLTRPIEELEAGIVAFGAGKTKRIEKPIGAMSEIATLTDKFNDMAEVLEEREEALLDSRGNRFAKLIDGMSDK SFYCSVAPNGVIDQVSDGVEKVLGVTPELLKRKYQRMFSDNPINELNWQYMDKALLGENVPPHQIEMIDGFGKLRRLDLF MQPLLSDNRELLSIEMLFNDVTEQFSAVAWSNAVLESAPEAMLIVEESGQLVFTNSRCQQLFGYDKQQMLAMSVDELVPD GVRYRHAALRTQFIAEGRDRKMGKGQTLNARKSDGSEFPVEISLGLLPVTDDGKRQVAATVRDMTVELEVAQRIKDSESR FRGLVTNIPGAVYRTRIGESWVMEYISNNISDITGFPASDFIENSSRSFASLIIEQDLEATTRTIEEALLAQKSFEIQYR IKHRDGSIHWVHEKGKASYGDEGGVLWFDGSINDITSSKLAQEEIVQSQQQLETITESIPSTVYQLHWCSSGERTFTFLS SACITTLGFHRDEVMNDFDLVAECIISEERSHIIEALSGQTSKGLQWTEEFRYRHPIGEIRWLQAGARGDLQADGCIIWN GYLMDITDRKQIDKELEDREAHFRALFDNAGIGIVNVDERGNILDCNEQFSFYMQTGVAELKSCSFFDFQHLDDREKARE VFADLTEGGSDNLLTELRLLNQSGECIWMDITLTKLQDPQGKLTSVVLSMANITSLKQLSEELKQAKDSADAANQAKSDF LANMSHEIRTPMNAIIGMSQLCLQTELNRKQQNYVLKIDRASKSLLGIINDILDFSKIEAGKLDIESVPFQLDTLLEDLS DMFSVKATDKRLELLFAVAPNIPRQLQGDPLRLSQVLINLMSNAIKFTEQGEVLLSISQLERIEDDIVLRFSVRDNGIGL TEEQRERLFKSFSQADTSTTRKYGGTGLGLAISKQLVELMGGEIGVESQFGNGSSFYFSVKLKVANNQLLKVKREIEGMR ILVADDNATARDIMRTTLESMGFKVDAVKSGAEAIEHCQHTDYPVALIDWLMPEMNGIEAAQKILSGKEHPPKILIVSAH ANAEFIEQVEHSDIASYITKPISASRLLDGIMSSLGQNGAMVVRRKGSDISQELLLQLQGKRVLLVEDNDMNQEVATEFL EQVGVVLSIAENGQVALEKLATQSFDLVLMDCQMPVMDGYQATRELRKMPGLEKLPVIAMTANAMAGDKEMCLRVGMNDH IAKPIEVARLYSTLLQYLGDSQQAITLTNLDGKESENVPFWPQHEALDIDKGLQLVQNSVRLYRRILERFHSGKSNIAEE IESALSQGKTADAIRYAHTLKGVSGNLCSPLLVDLASQLEAKLQDSPKADVTDELSQIAELTTSICAAIASWQASLDDAV EVEASGAPESLLSDKELSQEVTQLLQMLEEADSDAVDKMNDIRERVTELQWQKMSPAVAMVNSYQFDEAAELIQEQFKDR S
Sequences:
>Translated_1761_residues MSRLRTFRSRILSQIALPLIAIMAAVSSVNAWINFQDEEQDIYQHIGKIAENAALRLDHFLVTAETDTRSFAELLTEMGS REELADKAKLQLLLSHRLERHSDFYGSAIAFQKFFVEGRELFAPYAYRDKSKISMIDIGVEGYDYTNGEWGWWSQAIDNE DGYWSQPYLDEGAGNVLMVSFSQPFGEPRPFLGVVTVDLALNSIPQMVGNSANRIVVIDDKGQLIYHQNNDLLLKNGVDN WLSQSKENQKFIDLVHRGKPGYAYIEDSIGGKYLASIGVVPALNWRVVIMTSEQLLYDEFFRDIASLSLNLLLLSVLLLL TGYITARRLTRPIEELEAGIVAFGAGKTKRIEKPIGAMSEIATLTDKFNDMAEVLEEREEALLDSRGNRFAKLIDGMSDK SFYCSVAPNGVIDQVSDGVEKVLGVTPELLKRKYQRMFSDNPINELNWQYMDKALLGENVPPHQIEMIDGFGKLRRLDLF MQPLLSDNRELLSIEMLFNDVTEQFSAVAWSNAVLESAPEAMLIVEESGQLVFTNSRCQQLFGYDKQQMLAMSVDELVPD GVRYRHAALRTQFIAEGRDRKMGKGQTLNARKSDGSEFPVEISLGLLPVTDDGKRQVAATVRDMTVELEVAQRIKDSESR FRGLVTNIPGAVYRTRIGESWVMEYISNNISDITGFPASDFIENSSRSFASLIIEQDLEATTRTIEEALLAQKSFEIQYR IKHRDGSIHWVHEKGKASYGDEGGVLWFDGSINDITSSKLAQEEIVQSQQQLETITESIPSTVYQLHWCSSGERTFTFLS SACITTLGFHRDEVMNDFDLVAECIISEERSHIIEALSGQTSKGLQWTEEFRYRHPIGEIRWLQAGARGDLQADGCIIWN GYLMDITDRKQIDKELEDREAHFRALFDNAGIGIVNVDERGNILDCNEQFSFYMQTGVAELKSCSFFDFQHLDDREKARE VFADLTEGGSDNLLTELRLLNQSGECIWMDITLTKLQDPQGKLTSVVLSMANITSLKQLSEELKQAKDSADAANQAKSDF LANMSHEIRTPMNAIIGMSQLCLQTELNRKQQNYVLKIDRASKSLLGIINDILDFSKIEAGKLDIESVPFQLDTLLEDLS DMFSVKATDKRLELLFAVAPNIPRQLQGDPLRLSQVLINLMSNAIKFTEQGEVLLSISQLERIEDDIVLRFSVRDNGIGL TEEQRERLFKSFSQADTSTTRKYGGTGLGLAISKQLVELMGGEIGVESQFGNGSSFYFSVKLKVANNQLLKVKREIEGMR ILVADDNATARDIMRTTLESMGFKVDAVKSGAEAIEHCQHTDYPVALIDWLMPEMNGIEAAQKILSGKEHPPKILIVSAH ANAEFIEQVEHSDIASYITKPISASRLLDGIMSSLGQNGAMVVRRKGSDISQELLLQLQGKRVLLVEDNDMNQEVATEFL EQVGVVLSIAENGQVALEKLATQSFDLVLMDCQMPVMDGYQATRELRKMPGLEKLPVIAMTANAMAGDKEMCLRVGMNDH IAKPIEVARLYSTLLQYLGDSQQAITLTNLDGKESENVPFWPQHEALDIDKGLQLVQNSVRLYRRILERFHSGKSNIAEE IESALSQGKTADAIRYAHTLKGVSGNLCSPLLVDLASQLEAKLQDSPKADVTDELSQIAELTTSICAAIASWQASLDDAV EVEASGAPESLLSDKELSQEVTQLLQMLEEADSDAVDKMNDIRERVTELQWQKMSPAVAMVNSYQFDEAAELIQEQFKDR S >Mature_1760_residues SRLRTFRSRILSQIALPLIAIMAAVSSVNAWINFQDEEQDIYQHIGKIAENAALRLDHFLVTAETDTRSFAELLTEMGSR EELADKAKLQLLLSHRLERHSDFYGSAIAFQKFFVEGRELFAPYAYRDKSKISMIDIGVEGYDYTNGEWGWWSQAIDNED GYWSQPYLDEGAGNVLMVSFSQPFGEPRPFLGVVTVDLALNSIPQMVGNSANRIVVIDDKGQLIYHQNNDLLLKNGVDNW LSQSKENQKFIDLVHRGKPGYAYIEDSIGGKYLASIGVVPALNWRVVIMTSEQLLYDEFFRDIASLSLNLLLLSVLLLLT GYITARRLTRPIEELEAGIVAFGAGKTKRIEKPIGAMSEIATLTDKFNDMAEVLEEREEALLDSRGNRFAKLIDGMSDKS FYCSVAPNGVIDQVSDGVEKVLGVTPELLKRKYQRMFSDNPINELNWQYMDKALLGENVPPHQIEMIDGFGKLRRLDLFM QPLLSDNRELLSIEMLFNDVTEQFSAVAWSNAVLESAPEAMLIVEESGQLVFTNSRCQQLFGYDKQQMLAMSVDELVPDG VRYRHAALRTQFIAEGRDRKMGKGQTLNARKSDGSEFPVEISLGLLPVTDDGKRQVAATVRDMTVELEVAQRIKDSESRF RGLVTNIPGAVYRTRIGESWVMEYISNNISDITGFPASDFIENSSRSFASLIIEQDLEATTRTIEEALLAQKSFEIQYRI KHRDGSIHWVHEKGKASYGDEGGVLWFDGSINDITSSKLAQEEIVQSQQQLETITESIPSTVYQLHWCSSGERTFTFLSS ACITTLGFHRDEVMNDFDLVAECIISEERSHIIEALSGQTSKGLQWTEEFRYRHPIGEIRWLQAGARGDLQADGCIIWNG YLMDITDRKQIDKELEDREAHFRALFDNAGIGIVNVDERGNILDCNEQFSFYMQTGVAELKSCSFFDFQHLDDREKAREV FADLTEGGSDNLLTELRLLNQSGECIWMDITLTKLQDPQGKLTSVVLSMANITSLKQLSEELKQAKDSADAANQAKSDFL ANMSHEIRTPMNAIIGMSQLCLQTELNRKQQNYVLKIDRASKSLLGIINDILDFSKIEAGKLDIESVPFQLDTLLEDLSD MFSVKATDKRLELLFAVAPNIPRQLQGDPLRLSQVLINLMSNAIKFTEQGEVLLSISQLERIEDDIVLRFSVRDNGIGLT EEQRERLFKSFSQADTSTTRKYGGTGLGLAISKQLVELMGGEIGVESQFGNGSSFYFSVKLKVANNQLLKVKREIEGMRI LVADDNATARDIMRTTLESMGFKVDAVKSGAEAIEHCQHTDYPVALIDWLMPEMNGIEAAQKILSGKEHPPKILIVSAHA NAEFIEQVEHSDIASYITKPISASRLLDGIMSSLGQNGAMVVRRKGSDISQELLLQLQGKRVLLVEDNDMNQEVATEFLE QVGVVLSIAENGQVALEKLATQSFDLVLMDCQMPVMDGYQATRELRKMPGLEKLPVIAMTANAMAGDKEMCLRVGMNDHI AKPIEVARLYSTLLQYLGDSQQAITLTNLDGKESENVPFWPQHEALDIDKGLQLVQNSVRLYRRILERFHSGKSNIAEEI ESALSQGKTADAIRYAHTLKGVSGNLCSPLLVDLASQLEAKLQDSPKADVTDELSQIAELTTSICAAIASWQASLDDAVE VEASGAPESLLSDKELSQEVTQLLQMLEEADSDAVDKMNDIRERVTELQWQKMSPAVAMVNSYQFDEAAELIQEQFKDRS
Specific function: Member of the two-component regulatory system UvrY/BarA involved in the regulation of carbon metabolism via the CsrA/CsrB regulatory system. Phosphorylates UvrY, probably via a four-step phosphorelay [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=643, Percent_Identity=33.4370139968896, Blast_Score=323, Evalue=6e-89, Organism=Escherichia coli, GI145693157, Length=531, Percent_Identity=32.7683615819209, Blast_Score=242, Evalue=1e-64, Organism=Escherichia coli, GI87081816, Length=379, Percent_Identity=35.3562005277045, Blast_Score=209, Evalue=1e-54, Organism=Escherichia coli, GI1788713, Length=487, Percent_Identity=31.006160164271, Blast_Score=201, Evalue=4e-52, Organism=Escherichia coli, GI48994928, Length=373, Percent_Identity=30.0268096514745, Blast_Score=194, Evalue=3e-50, Organism=Escherichia coli, GI1788393, Length=240, Percent_Identity=28.75, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI1788549, Length=364, Percent_Identity=22.5274725274725, Blast_Score=94, Evalue=6e-20, Organism=Escherichia coli, GI1786783, Length=310, Percent_Identity=26.4516129032258, Blast_Score=94, Evalue=7e-20, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=27.8260869565217, Blast_Score=91, Evalue=8e-19, Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=29.0598290598291, Blast_Score=89, Evalue=2e-18, Organism=Escherichia coli, GI1790346, Length=214, Percent_Identity=29.4392523364486, Blast_Score=75, Evalue=5e-14, Organism=Escherichia coli, GI1786912, Length=278, Percent_Identity=25.5395683453237, Blast_Score=74, Evalue=6e-14, Organism=Escherichia coli, GI1787894, Length=265, Percent_Identity=25.6603773584906, Blast_Score=74, Evalue=7e-14, Organism=Escherichia coli, GI87082128, Length=240, Percent_Identity=26.25, Blast_Score=71, Evalue=5e-13, Organism=Escherichia coli, GI1788279, Length=238, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1790300, Length=307, Percent_Identity=25.7328990228013, Blast_Score=68, Evalue=6e-12, Organism=Escherichia coli, GI87082012, Length=120, Percent_Identity=31.6666666666667, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1789808, Length=218, Percent_Identity=25.2293577981651, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322000, Length=122, Percent_Identity=39.344262295082, Blast_Score=86, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6322044, Length=127, Percent_Identity=33.0708661417323, Blast_Score=76, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR019247 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF09984 DUF2222; PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 197139; Mature: 197008
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS50885 HAMP ; PS50894 HPT ; PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRTFRSRILSQIALPLIAIMAAVSSVNAWINFQDEEQDIYQHIGKIAENAALRLDHF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHEEEEEE LVTAETDTRSFAELLTEMGSREELADKAKLQLLLSHRLERHSDFYGSAIAFQKFFVEGRE EEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LFAPYAYRDKSKISMIDIGVEGYDYTNGEWGWWSQAIDNEDGYWSQPYLDEGAGNVLMVS HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEE FSQPFGEPRPFLGVVTVDLALNSIPQMVGNSANRIVVIDDKGQLIYHQNNDLLLKNGVDN ECCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEEECCCHH WLSQSKENQKFIDLVHRGKPGYAYIEDSIGGKYLASIGVVPALNWRVVIMTSEQLLYDEF HHHCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHHH FRDIASLSLNLLLLSVLLLLTGYITARRLTRPIEELEAGIVAFGAGKTKRIEKPIGAMSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHHH IATLTDKFNDMAEVLEEREEALLDSRGNRFAKLIDGMSDKSFYCSVAPNGVIDQVSDGVE HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH KVLGVTPELLKRKYQRMFSDNPINELNWQYMDKALLGENVPPHQIEMIDGFGKLRRLDLF HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MQPLLSDNRELLSIEMLFNDVTEQFSAVAWSNAVLESAPEAMLIVEESGQLVFTNSRCQQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHH LFGYDKQQMLAMSVDELVPDGVRYRHAALRTQFIAEGRDRKMGKGQTLNARKSDGSEFPV HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE EISLGLLPVTDDGKRQVAATVRDMTVELEVAQRIKDSESRFRGLVTNIPGAVYRTRIGES EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH WVMEYISNNISDITGFPASDFIENSSRSFASLIIEQDLEATTRTIEEALLAQKSFEIQYR HHHHHHHCCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE IKHRDGSIHWVHEKGKASYGDEGGVLWFDGSINDITSSKLAQEEIVQSQQQLETITESIP EEECCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH STVYQLHWCSSGERTFTFLSSACITTLGFHRDEVMNDFDLVAECIISEERSHIIEALSGQ HHHEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSKGLQWTEEFRYRHPIGEIRWLQAGARGDLQADGCIIWNGYLMDITDRKQIDKELEDRE CCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHH AHFRALFDNAGIGIVNVDERGNILDCNEQFSFYMQTGVAELKSCSFFDFQHLDDREKARE HHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH VFADLTEGGSDNLLTELRLLNQSGECIWMDITLTKLQDPQGKLTSVVLSMANITSLKQLS HHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH EELKQAKDSADAANQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELNRKQQNYVLKIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC ASKSLLGIINDILDFSKIEAGKLDIESVPFQLDTLLEDLSDMFSVKATDKRLELLFAVAP HHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC NIPRQLQGDPLRLSQVLINLMSNAIKFTEQGEVLLSISQLERIEDDIVLRFSVRDNGIGL CCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCEEEEEEECCCCCCC TEEQRERLFKSFSQADTSTTRKYGGTGLGLAISKQLVELMGGEIGVESQFGNGSSFYFSV CHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE KLKVANNQLLKVKREIEGMRILVADDNATARDIMRTTLESMGFKVDAVKSGAEAIEHCQH EEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHCC TDYPVALIDWLMPEMNGIEAAQKILSGKEHPPKILIVSAHANAEFIEQVEHSDIASYITK CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC PISASRLLDGIMSSLGQNGAMVVRRKGSDISQELLLQLQGKRVLLVEDNDMNQEVATEFL CCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH EQVGVVLSIAENGQVALEKLATQSFDLVLMDCQMPVMDGYQATRELRKMPGLEKLPVIAM HHHCCEEEECCCCHHHHHHHHCCCCCEEEEECCCCHHCHHHHHHHHHHCCCCCCCCEEEE TANAMAGDKEMCLRVGMNDHIAKPIEVARLYSTLLQYLGDSQQAITLTNLDGKESENVPF ECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC WPQHEALDIDKGLQLVQNSVRLYRRILERFHSGKSNIAEEIESALSQGKTADAIRYAHTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH KGVSGNLCSPLLVDLASQLEAKLQDSPKADVTDELSQIAELTTSICAAIASWQASLDDAV CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE EVEASGAPESLLSDKELSQEVTQLLQMLEEADSDAVDKMNDIRERVTELQWQKMSPAVAM EEECCCCCHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH VNSYQFDEAAELIQEQFKDRS HHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SRLRTFRSRILSQIALPLIAIMAAVSSVNAWINFQDEEQDIYQHIGKIAENAALRLDHF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHEEEEEE LVTAETDTRSFAELLTEMGSREELADKAKLQLLLSHRLERHSDFYGSAIAFQKFFVEGRE EEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LFAPYAYRDKSKISMIDIGVEGYDYTNGEWGWWSQAIDNEDGYWSQPYLDEGAGNVLMVS HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEE FSQPFGEPRPFLGVVTVDLALNSIPQMVGNSANRIVVIDDKGQLIYHQNNDLLLKNGVDN ECCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEEECCCHH WLSQSKENQKFIDLVHRGKPGYAYIEDSIGGKYLASIGVVPALNWRVVIMTSEQLLYDEF HHHCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHHH FRDIASLSLNLLLLSVLLLLTGYITARRLTRPIEELEAGIVAFGAGKTKRIEKPIGAMSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHHH IATLTDKFNDMAEVLEEREEALLDSRGNRFAKLIDGMSDKSFYCSVAPNGVIDQVSDGVE HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH KVLGVTPELLKRKYQRMFSDNPINELNWQYMDKALLGENVPPHQIEMIDGFGKLRRLDLF HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MQPLLSDNRELLSIEMLFNDVTEQFSAVAWSNAVLESAPEAMLIVEESGQLVFTNSRCQQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHH LFGYDKQQMLAMSVDELVPDGVRYRHAALRTQFIAEGRDRKMGKGQTLNARKSDGSEFPV HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE EISLGLLPVTDDGKRQVAATVRDMTVELEVAQRIKDSESRFRGLVTNIPGAVYRTRIGES EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH WVMEYISNNISDITGFPASDFIENSSRSFASLIIEQDLEATTRTIEEALLAQKSFEIQYR HHHHHHHCCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE IKHRDGSIHWVHEKGKASYGDEGGVLWFDGSINDITSSKLAQEEIVQSQQQLETITESIP EEECCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH STVYQLHWCSSGERTFTFLSSACITTLGFHRDEVMNDFDLVAECIISEERSHIIEALSGQ HHHEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSKGLQWTEEFRYRHPIGEIRWLQAGARGDLQADGCIIWNGYLMDITDRKQIDKELEDRE CCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHH AHFRALFDNAGIGIVNVDERGNILDCNEQFSFYMQTGVAELKSCSFFDFQHLDDREKARE HHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH VFADLTEGGSDNLLTELRLLNQSGECIWMDITLTKLQDPQGKLTSVVLSMANITSLKQLS HHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH EELKQAKDSADAANQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELNRKQQNYVLKIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC ASKSLLGIINDILDFSKIEAGKLDIESVPFQLDTLLEDLSDMFSVKATDKRLELLFAVAP HHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC NIPRQLQGDPLRLSQVLINLMSNAIKFTEQGEVLLSISQLERIEDDIVLRFSVRDNGIGL CCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCEEEEEEECCCCCCC TEEQRERLFKSFSQADTSTTRKYGGTGLGLAISKQLVELMGGEIGVESQFGNGSSFYFSV CHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE KLKVANNQLLKVKREIEGMRILVADDNATARDIMRTTLESMGFKVDAVKSGAEAIEHCQH EEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHCC TDYPVALIDWLMPEMNGIEAAQKILSGKEHPPKILIVSAHANAEFIEQVEHSDIASYITK CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHC PISASRLLDGIMSSLGQNGAMVVRRKGSDISQELLLQLQGKRVLLVEDNDMNQEVATEFL CCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH EQVGVVLSIAENGQVALEKLATQSFDLVLMDCQMPVMDGYQATRELRKMPGLEKLPVIAM HHHCCEEEECCCCHHHHHHHHCCCCCEEEEECCCCHHCHHHHHHHHHHCCCCCCCCEEEE TANAMAGDKEMCLRVGMNDHIAKPIEVARLYSTLLQYLGDSQQAITLTNLDGKESENVPF ECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC WPQHEALDIDKGLQLVQNSVRLYRRILERFHSGKSNIAEEIESALSQGKTADAIRYAHTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH KGVSGNLCSPLLVDLASQLEAKLQDSPKADVTDELSQIAELTTSICAAIASWQASLDDAV CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE EVEASGAPESLLSDKELSQEVTQLLQMLEEADSDAVDKMNDIRERVTELQWQKMSPAVAM EEECCCCCHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH VNSYQFDEAAELIQEQFKDRS HHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]