Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is cutA [H]

Identifier: 167622611

GI number: 167622611

Start: 828983

End: 829306

Strand: Reverse

Name: cutA [H]

Synonym: Shal_0671

Alternate gene names: 167622611

Gene position: 829306-828983 (Counterclockwise)

Preceding gene: 167622613

Following gene: 167622610

Centisome position: 15.87

GC content: 45.99

Gene sequence:

>324_bases
ATGCAAAACGAATTTTTGTTAGTGATCACCAGCTGCCCCAGCGAGGAGCAAGCCAAAATTCTTGCTCGTGAGCTGGTTAA
AAACAAGCTTGCTGCCTGCGTACAGATCTCTCAAGGGATCACCTCCGTATATGAGTGGCAAGGAGAGCTGTGTGAAGAAC
AGGAGTTCAGTTTGCAAATTAAATGCTTAGCGCAGCATTACAGTGCTATAGAGCACACACTCTCTAAGCTGCACCCCTAT
GATGTACCCGAGCTAATTGCAGTTCCTGTTACCCAAGGACTGCCAGCCTATTTTGATTGGATAAAAGAAACTACACAGCC
ATGA

Upstream 100 bases:

>100_bases
TAAAGCCGTTCGCCTTATTGATAGCCATTGTACCTTGATTGGCATAATACAATAGTTGGCTTAATACAATTTTAATCTGT
TGGACAATAGAAATAGTTTA

Downstream 100 bases:

>100_bases
AAAGAATCATAAACCTGTTTTTAGCCTCACTACTGCTGCTTACGCCACTGGCGCACGCTGACGGCATTTTCAGTAGTAAT
AAGTTTGACTTTTTAAAGGG

Product: CutA1 divalent ion tolerance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQIKCLAQHYSAIEHTLSKLHPY
DVPELIAVPVTQGLPAYFDWIKETTQP

Sequences:

>Translated_107_residues
MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQIKCLAQHYSAIEHTLSKLHPY
DVPELIAVPVTQGLPAYFDWIKETTQP
>Mature_107_residues
MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQIKCLAQHYSAIEHTLSKLHPY
DVPELIAVPVTQGLPAYFDWIKETTQP

Specific function: Involved in resistance toward heavy metals [H]

COG id: COG1324

COG function: function code P; Uncharacterized protein involved in tolerance to divalent cations

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CutA family [H]

Homologues:

Organism=Homo sapiens, GI62526026, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=7e-18,
Organism=Homo sapiens, GI62526024, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=8e-18,
Organism=Homo sapiens, GI62526022, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=8e-18,
Organism=Homo sapiens, GI7706244, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=8e-18,
Organism=Homo sapiens, GI62198241, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI1790579, Length=99, Percent_Identity=36.3636363636364, Blast_Score=74, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32565476, Length=103, Percent_Identity=29.126213592233, Blast_Score=62, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24641937, Length=98, Percent_Identity=38.7755102040816, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004323
- InterPro:   IPR011322 [H]

Pfam domain/function: PF03091 CutA1 [H]

EC number: NA

Molecular weight: Translated: 12150; Mature: 12150

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQI
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KCLAQHYSAIEHTLSKLHPYDVPELIAVPVTQGLPAYFDWIKETTQP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQI
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KCLAQHYSAIEHTLSKLHPYDVPELIAVPVTQGLPAYFDWIKETTQP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA