| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622613
Identifier: 167622613
GI number: 167622613
Start: 830283
End: 832127
Strand: Reverse
Name: 167622613
Synonym: Shal_0673
Alternate gene names: NA
Gene position: 832127-830283 (Counterclockwise)
Preceding gene: 167622616
Following gene: 167622611
Centisome position: 15.92
GC content: 47.53
Gene sequence:
>1845_bases ATGGGGTTAACAAAAGAGGGATCTCACTTGCAAACACCAGAACTCCAACACTTTTACATATCAGAAGAGCAATCTGTCTA CCTGCTGGGTGCGCAAGATGCCCGTAAACATAGAGCTTGGATCCGCCTGTGTAAACAGCAGCTCGGTAAGTTAGGATATC AAGAGCTAGAGCTCGTCGGTAAAGGCGCTTATGGATTTGTGTTTGCAGGAGTCAATAAGTCTGGACAGGCTCATGTGTTT AAGTTCTCCCGCTTAACCTTACCGCAGCATATTCAAGATAGGCTTGAAGAGGAAGCCTTTATGCTTTCTCAGGTGATCCA TCCTAATGTGCCACCGGTAATCAAGTTTGAACATGTAGGTAAGCAAGGGATCTTGGTGATGGCAAGGGCTCCAGGCGAAG ACCTCGAACGGCTTTGTGTCAGAGTCGGCGCTCTGCCCGTTGCCATGGTGATGAATATTGCCCGCCAACTCGCAGCCATC TTACAATACCTGCATCACGGTAGACCGCTCATTCATGGTGATATTAAACCGTCAAACCTCGTCTATGACATTAACACCCA ACACCTCTCCCTGATTGATTGGGGCTCGGCGGTATTTGCACAGCGAGACACCCAAGGTAACCCCGTTAATGGCAATGTGA TGGACTTGATGTCGAGCGATCAACAACACACTAATGCCCGCATGGGGGATGTATATTTTATTGGTGAGGAACAACTTAAT GGCGCCCTCTCTAGTCCAAGATTTGATGAACAAGGCGTTGCAGCCACCCTTTACGCTTTAGCATCGGGGCAAGCGAGCCG TTTCGGCAGTAAAGTAATCCCGGCTACCAGTATCGGCTTGCCAATCGAGCTAGCTCGAACCTTAGATGGCATGCTCAGCG ATGACCCACAGCAACGCAAAAAAGCGGGCGATTACTTCTTAAAAAGTATGGCTCACAGCCACCGTATGCACCTGCCAGAA ATTGACACCACACCGCTCGTTGCTGAAATTCCGGTTTGGAATCTTCCTAGAGATAAAGAGGTTGAGACCGTGAGCTACAG CTCGCGAAAATCATTTCTAAAAGAGCACAATGGTGACGATCCCATAGCCAAAATGGATGATCTACAGTTAGAAAAATACT ACCGCAATTTTATGGCGGGAATGGGGGATACTGAAAAAGGTTTTATTGCAGCGGTTGGCCGCCTAAGCCAATATGCTATT GTTGGCGGACTGGCGATTCACTGGCGTGAAACCGGTGTGTTTATCGACTCTAACTTGGCTATTTATAAGGCTGAACAAAA ACATGCTATTACGGTTGCCGTCAACAATATGGTGACGCTTGCTCGTGGTATTCGCCGCATTGGCGTATTTAAAGCCTGCT TCTTTAATGCTCGCGACACCTTGCACATCGAACGCCAAGACAGCACACAACCATTTGTGACTGGCTGCGATCTCCAGCTC CCCTTTGAGGTGGGTAATGTGCCATCGCTTGAAGATAAATCACGACTACATTCCTACTTTGAAGATGGCCGCGATCCAGA AGAGAACTTAGAGTTACCAAAAGAGATCATGACCGAGCTTGGCTGGATAAACCAGATCCATCATACCGGTTGTATCATTT TTGAAGTGCTGCCCAATCACATGAAGATCCACAGCTACTTGCGCTTACTTAACCCCAGAAAGCAGGCCGCTTTTCGTGCC AGCTTAGATAGGATCTTAGCCCATGTAGATAAGATCCAAGGCAAAGGGGTGTCAGGCTTTATGAAACTGCCTTATAAAAA CACCCGTAAATTTAACCTGATAGAACGACGTGCCGACCACTTTTACCCTCGAAACCCTAAGCAATTAGAGCATGAACAAC CATAG
Upstream 100 bases:
>100_bases CGAAAATATTGGCTAGGTGTGACCCAGATAGGCTTTTTACACCTTAGCTGCAAGCTTCATTATTCTATGGCCTTGGACTT TATTACAGCTTATTGATTTA
Downstream 100 bases:
>100_bases CGTTAGTGCTTTGGCAGTTGTTTATCGTCGGACTCTTTATCCGTTTTACGGGTAACGGTTTCGCCCTCAAAGGTCGATCC CTTTACTTGATGGCTCTCTG
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: Protein Kinase; Serine/Threonine Kinase; Non-Specific Serine/Threonine Protein Kinase; Serine/Threonine-Protein Kinase; Serine/Threonine Protein Kinase With TPR Repeats
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MGLTKEGSHLQTPELQHFYISEEQSVYLLGAQDARKHRAWIRLCKQQLGKLGYQELELVGKGAYGFVFAGVNKSGQAHVF KFSRLTLPQHIQDRLEEEAFMLSQVIHPNVPPVIKFEHVGKQGILVMARAPGEDLERLCVRVGALPVAMVMNIARQLAAI LQYLHHGRPLIHGDIKPSNLVYDINTQHLSLIDWGSAVFAQRDTQGNPVNGNVMDLMSSDQQHTNARMGDVYFIGEEQLN GALSSPRFDEQGVAATLYALASGQASRFGSKVIPATSIGLPIELARTLDGMLSDDPQQRKKAGDYFLKSMAHSHRMHLPE IDTTPLVAEIPVWNLPRDKEVETVSYSSRKSFLKEHNGDDPIAKMDDLQLEKYYRNFMAGMGDTEKGFIAAVGRLSQYAI VGGLAIHWRETGVFIDSNLAIYKAEQKHAITVAVNNMVTLARGIRRIGVFKACFFNARDTLHIERQDSTQPFVTGCDLQL PFEVGNVPSLEDKSRLHSYFEDGRDPEENLELPKEIMTELGWINQIHHTGCIIFEVLPNHMKIHSYLRLLNPRKQAAFRA SLDRILAHVDKIQGKGVSGFMKLPYKNTRKFNLIERRADHFYPRNPKQLEHEQP
Sequences:
>Translated_614_residues MGLTKEGSHLQTPELQHFYISEEQSVYLLGAQDARKHRAWIRLCKQQLGKLGYQELELVGKGAYGFVFAGVNKSGQAHVF KFSRLTLPQHIQDRLEEEAFMLSQVIHPNVPPVIKFEHVGKQGILVMARAPGEDLERLCVRVGALPVAMVMNIARQLAAI LQYLHHGRPLIHGDIKPSNLVYDINTQHLSLIDWGSAVFAQRDTQGNPVNGNVMDLMSSDQQHTNARMGDVYFIGEEQLN GALSSPRFDEQGVAATLYALASGQASRFGSKVIPATSIGLPIELARTLDGMLSDDPQQRKKAGDYFLKSMAHSHRMHLPE IDTTPLVAEIPVWNLPRDKEVETVSYSSRKSFLKEHNGDDPIAKMDDLQLEKYYRNFMAGMGDTEKGFIAAVGRLSQYAI VGGLAIHWRETGVFIDSNLAIYKAEQKHAITVAVNNMVTLARGIRRIGVFKACFFNARDTLHIERQDSTQPFVTGCDLQL PFEVGNVPSLEDKSRLHSYFEDGRDPEENLELPKEIMTELGWINQIHHTGCIIFEVLPNHMKIHSYLRLLNPRKQAAFRA SLDRILAHVDKIQGKGVSGFMKLPYKNTRKFNLIERRADHFYPRNPKQLEHEQP >Mature_613_residues GLTKEGSHLQTPELQHFYISEEQSVYLLGAQDARKHRAWIRLCKQQLGKLGYQELELVGKGAYGFVFAGVNKSGQAHVFK FSRLTLPQHIQDRLEEEAFMLSQVIHPNVPPVIKFEHVGKQGILVMARAPGEDLERLCVRVGALPVAMVMNIARQLAAIL QYLHHGRPLIHGDIKPSNLVYDINTQHLSLIDWGSAVFAQRDTQGNPVNGNVMDLMSSDQQHTNARMGDVYFIGEEQLNG ALSSPRFDEQGVAATLYALASGQASRFGSKVIPATSIGLPIELARTLDGMLSDDPQQRKKAGDYFLKSMAHSHRMHLPEI DTTPLVAEIPVWNLPRDKEVETVSYSSRKSFLKEHNGDDPIAKMDDLQLEKYYRNFMAGMGDTEKGFIAAVGRLSQYAIV GGLAIHWRETGVFIDSNLAIYKAEQKHAITVAVNNMVTLARGIRRIGVFKACFFNARDTLHIERQDSTQPFVTGCDLQLP FEVGNVPSLEDKSRLHSYFEDGRDPEENLELPKEIMTELGWINQIHHTGCIIFEVLPNHMKIHSYLRLLNPRKQAAFRAS LDRILAHVDKIQGKGVSGFMKLPYKNTRKFNLIERRADHFYPRNPKQLEHEQP
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69251; Mature: 69120
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS00108 PROTEIN_KINASE_ST ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTKEGSHLQTPELQHFYISEEQSVYLLGAQDARKHRAWIRLCKQQLGKLGYQELELVG CCCCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHC KGAYGFVFAGVNKSGQAHVFKFSRLTLPQHIQDRLEEEAFMLSQVIHPNVPPVIKFEHVG CCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC KQGILVMARAPGEDLERLCVRVGALPVAMVMNIARQLAAILQYLHHGRPLIHGDIKPSNL CCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCE VYDINTQHLSLIDWGSAVFAQRDTQGNPVNGNVMDLMSSDQQHTNARMGDVYFIGEEQLN EEECCCCEEEEEECCCHHHEECCCCCCCCCCCHHHHHCCCCHHCCCCCCCEEEEEHHHHC GALSSPRFDEQGVAATLYALASGQASRFGSKVIPATSIGLPIELARTLDGMLSDDPQQRK CCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH KAGDYFLKSMAHSHRMHLPEIDTTPLVAEIPVWNLPRDKEVETVSYSSRKSFLKEHNGDD HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCHHHHHHHHHCCCCC PIAKMDDLQLEKYYRNFMAGMGDTEKGFIAAVGRLSQYAIVGGLAIHWRETGVFIDSNLA CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCEE IYKAEQKHAITVAVNNMVTLARGIRRIGVFKACFFNARDTLHIERQDSTQPFVTGCDLQL EEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEE PFEVGNVPSLEDKSRLHSYFEDGRDPEENLELPKEIMTELGWINQIHHTGCIIFEVLPNH CCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCCH MKIHSYLRLLNPRKQAAFRASLDRILAHVDKIQGKGVSGFMKLPYKNTRKFNLIERRADH HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHH FYPRNPKQLEHEQP CCCCCCCCCCCCCC >Mature Secondary Structure GLTKEGSHLQTPELQHFYISEEQSVYLLGAQDARKHRAWIRLCKQQLGKLGYQELELVG CCCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHC KGAYGFVFAGVNKSGQAHVFKFSRLTLPQHIQDRLEEEAFMLSQVIHPNVPPVIKFEHVG CCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC KQGILVMARAPGEDLERLCVRVGALPVAMVMNIARQLAAILQYLHHGRPLIHGDIKPSNL CCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCE VYDINTQHLSLIDWGSAVFAQRDTQGNPVNGNVMDLMSSDQQHTNARMGDVYFIGEEQLN EEECCCCEEEEEECCCHHHEECCCCCCCCCCCHHHHHCCCCHHCCCCCCCEEEEEHHHHC GALSSPRFDEQGVAATLYALASGQASRFGSKVIPATSIGLPIELARTLDGMLSDDPQQRK CCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH KAGDYFLKSMAHSHRMHLPEIDTTPLVAEIPVWNLPRDKEVETVSYSSRKSFLKEHNGDD HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCHHHHHHHHHCCCCC PIAKMDDLQLEKYYRNFMAGMGDTEKGFIAAVGRLSQYAIVGGLAIHWRETGVFIDSNLA CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCEE IYKAEQKHAITVAVNNMVTLARGIRRIGVFKACFFNARDTLHIERQDSTQPFVTGCDLQL EEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEE PFEVGNVPSLEDKSRLHSYFEDGRDPEENLELPKEIMTELGWINQIHHTGCIIFEVLPNH CCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCCH MKIHSYLRLLNPRKQAAFRASLDRILAHVDKIQGKGVSGFMKLPYKNTRKFNLIERRADH HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHH FYPRNPKQLEHEQP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA