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The map label for this gene is ygeX [H]

Identifier: 167622576

GI number: 167622576

Start: 769189

End: 770403

Strand: Direct

Name: ygeX [H]

Synonym: Shal_0636

Alternate gene names: 167622576

Gene position: 769189-770403 (Clockwise)

Preceding gene: 167622575

Following gene: 167622577

Centisome position: 14.72

GC content: 44.77

Gene sequence:

>1215_bases
ATGCCCGTGTCTACATTCTCTCTTAATATGGAGATAGCTGATAACCGTCATTTCAATGGTCAACTGTCTCCTCTTTTTAC
TGTTGAAGAAGCGAAAAAAGCCCTTGCTTTTCATAGCAGTATTGATGGCTATAAGCCAACACCCCTTTTGTCTCTTGATT
GTCTAGCCGAAGAGTTTGGTATCGGTAAGATCTTAGTTAAAGATGAATCACACCGCTTTGGTCTGAATGCTTTCAAAATG
TTGGGTGGTGCCTATGCTATTGCACTTCTACTTTGCGATAAGTTCAAGCTTGATATCAATGCATTTGATTTTGACAAGCT
AAAAAATGAGATCACAGAGAAGATGACCTTTGCCACAGCGACTGATGGAAACCATGGTCGTGGTGTTGCATGGGCTGCTA
AGAAGCTAGGTCAAAACGCCGTTGTTTATATGCCAAAAGGTTCAGCCGAAGAGCGTGTCAATAACATTAAAGCACTCGGC
GCCGAATGTATTGTTACTGATATGAACTATGACGATACCGTGCGTTTAGTGCTAAAAACAGCCAACGAAAATGGCTGGAA
AGTTATTCAAGATACAGCCTGGGAAGGCTATGAAGAGATCCCGACTTGGATCTCTCAGGGATACACTGCGATGGTAATTG
AGGCAGTGATGCAACTGGAAGAACATAGCGTTAAAGCACCGACCCATGTGCTACTTCAGGCGGGTGTTGGAGCTCTGGCA
AGTGGCGCATTAGGTTACCTCACCAATGTTTACGGTGCCGATAACCTACATTCAATCATCGTTGAGCCTGCTAAGGCGGA
CTGCATGTATCGCTCAAGCCTCACCGAAAAAGGCGAGATCGTTAATGTCGATGGTGATCTAGATACCATTATGGCTGGAC
TTGCCTGTGGTGAGCCTACGACGATTGGCTGGCCTGTAATGCGTGATTGCACTACTCAGTTTGTCTCATGTGATGATGAG
GTTGCTGCTTTAGGTATGCGCGTTCTCGGTAATCCACTAGGGAATGACCCTCGAATCATATCAGGTGAATCTGGTGCGGT
CGGCTTAGGTATGTTAGCTGCCATCCACTTCCATGAAGATAAAGATGTTCTGATGAAAAAGGTCGGTTTGAACAAAGACT
CTGTGGTGCTGCTTATTAACACCGAGGGTGATACTGACGCCAAGAATTATAGAGAAGTTGTTTGGGAAGGTAAGTACCCA
ACAACAGCTAAATAA

Upstream 100 bases:

>100_bases
AAACGAGTGAAATAACCTCACTCTAAGTTCTTCTGACTCTTGTTTCAAGCAAGAGTATCGGGGGCAGGTTCTGCCCCTCT
ATCAGTTTCGTTTGTGAGGT

Downstream 100 bases:

>100_bases
CCCAATGTGAACCCCATAGTCATCTTGTCAAGAACTCAGGCTTAGGACGTTCACACATTACTATTCCCAGCGTTTTAAAG
GCGCTGTTGAAGGAGAAATA

Product: diaminopropionate ammonia-lyase

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MPVSTFSLNMEIADNRHFNGQLSPLFTVEEAKKALAFHSSIDGYKPTPLLSLDCLAEEFGIGKILVKDESHRFGLNAFKM
LGGAYAIALLLCDKFKLDINAFDFDKLKNEITEKMTFATATDGNHGRGVAWAAKKLGQNAVVYMPKGSAEERVNNIKALG
AECIVTDMNYDDTVRLVLKTANENGWKVIQDTAWEGYEEIPTWISQGYTAMVIEAVMQLEEHSVKAPTHVLLQAGVGALA
SGALGYLTNVYGADNLHSIIVEPAKADCMYRSSLTEKGEIVNVDGDLDTIMAGLACGEPTTIGWPVMRDCTTQFVSCDDE
VAALGMRVLGNPLGNDPRIISGESGAVGLGMLAAIHFHEDKDVLMKKVGLNKDSVVLLINTEGDTDAKNYREVVWEGKYP
TTAK

Sequences:

>Translated_404_residues
MPVSTFSLNMEIADNRHFNGQLSPLFTVEEAKKALAFHSSIDGYKPTPLLSLDCLAEEFGIGKILVKDESHRFGLNAFKM
LGGAYAIALLLCDKFKLDINAFDFDKLKNEITEKMTFATATDGNHGRGVAWAAKKLGQNAVVYMPKGSAEERVNNIKALG
AECIVTDMNYDDTVRLVLKTANENGWKVIQDTAWEGYEEIPTWISQGYTAMVIEAVMQLEEHSVKAPTHVLLQAGVGALA
SGALGYLTNVYGADNLHSIIVEPAKADCMYRSSLTEKGEIVNVDGDLDTIMAGLACGEPTTIGWPVMRDCTTQFVSCDDE
VAALGMRVLGNPLGNDPRIISGESGAVGLGMLAAIHFHEDKDVLMKKVGLNKDSVVLLINTEGDTDAKNYREVVWEGKYP
TTAK
>Mature_403_residues
PVSTFSLNMEIADNRHFNGQLSPLFTVEEAKKALAFHSSIDGYKPTPLLSLDCLAEEFGIGKILVKDESHRFGLNAFKML
GGAYAIALLLCDKFKLDINAFDFDKLKNEITEKMTFATATDGNHGRGVAWAAKKLGQNAVVYMPKGSAEERVNNIKALGA
ECIVTDMNYDDTVRLVLKTANENGWKVIQDTAWEGYEEIPTWISQGYTAMVIEAVMQLEEHSVKAPTHVLLQAGVGALAS
GALGYLTNVYGADNLHSIIVEPAKADCMYRSSLTEKGEIVNVDGDLDTIMAGLACGEPTTIGWPVMRDCTTQFVSCDDEV
AALGMRVLGNPLGNDPRIISGESGAVGLGMLAAIHFHEDKDVLMKKVGLNKDSVVLLINTEGDTDAKNYREVVWEGKYPT
TAK

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=397, Percent_Identity=69.7732997481108, Blast_Score=585, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 43906; Mature: 43774

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSTFSLNMEIADNRHFNGQLSPLFTVEEAKKALAFHSSIDGYKPTPLLSLDCLAEEFG
CCCCEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCC
IGKILVKDESHRFGLNAFKMLGGAYAIALLLCDKFKLDINAFDFDKLKNEITEKMTFATA
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHEEEEE
TDGNHGRGVAWAAKKLGQNAVVYMPKGSAEERVNNIKALGAECIVTDMNYDDTVRLVLKT
CCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEE
ANENGWKVIQDTAWEGYEEIPTWISQGYTAMVIEAVMQLEEHSVKAPTHVLLQAGVGALA
CCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHH
SGALGYLTNVYGADNLHSIIVEPAKADCMYRSSLTEKGEIVNVDGDLDTIMAGLACGEPT
HCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCC
TIGWPVMRDCTTQFVSCDDEVAALGMRVLGNPLGNDPRIISGESGAVGLGMLAAIHFHED
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHEEEEECCC
KDVLMKKVGLNKDSVVLLINTEGDTDAKNYREVVWEGKYPTTAK
HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHEECCCCCCCCC
>Mature Secondary Structure 
PVSTFSLNMEIADNRHFNGQLSPLFTVEEAKKALAFHSSIDGYKPTPLLSLDCLAEEFG
CCCEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCC
IGKILVKDESHRFGLNAFKMLGGAYAIALLLCDKFKLDINAFDFDKLKNEITEKMTFATA
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHEEEEE
TDGNHGRGVAWAAKKLGQNAVVYMPKGSAEERVNNIKALGAECIVTDMNYDDTVRLVLKT
CCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEE
ANENGWKVIQDTAWEGYEEIPTWISQGYTAMVIEAVMQLEEHSVKAPTHVLLQAGVGALA
CCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHH
SGALGYLTNVYGADNLHSIIVEPAKADCMYRSSLTEKGEIVNVDGDLDTIMAGLACGEPT
HCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCC
TIGWPVMRDCTTQFVSCDDEVAALGMRVLGNPLGNDPRIISGESGAVGLGMLAAIHFHED
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHEEEEECCC
KDVLMKKVGLNKDSVVLLINTEGDTDAKNYREVVWEGKYPTTAK
HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]