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The map label for this gene is ygeY [H]

Identifier: 167622577

GI number: 167622577

Start: 770506

End: 771717

Strand: Direct

Name: ygeY [H]

Synonym: Shal_0637

Alternate gene names: 167622577

Gene position: 770506-771717 (Clockwise)

Preceding gene: 167622576

Following gene: 167622578

Centisome position: 14.74

GC content: 45.71

Gene sequence:

>1212_bases
ATGGCAATTCCTTTCAATGAAGTATTAGCAAAAGCAGAATCATACAAAGCTGATATGACTAAATTCCTACGTGACATGAT
CGCTATTCCAAGCGAAAGCTGTGACGAAGAGAAAGTTGTTTTACGTATTAAAGAAGAGATGGAAAAAGTGGGTTTCGACA
AAGTTGAAATCGATCCAATGGGCAACGTACTAGGTTACGTTGGTCACGGTCCACACCTTATCGCTATGGATGCACACATC
GATACTGTTGGTGTGGGCAACCTAGATAACTGGGATTTTGATCCTTACTTAGGTATGGAAGATGATGAAGTGATCGGTGG
TCGCGGTACTTCAGACCAGTCTGGTGGTATGGCTTCAATGGTTTATGCAGGTAAGATCATCAAGGACCTAGGTCTTGAAG
ATGAGTACACACTACTTGTGACTGGTACCGTTCAGGAAGAAGATTGTGATGGTCTTTGCTGGCAGTACATTATTGAAGAA
AGCAAGATCCGTCCAGAGTTCGTCGTTTCTACTGAGCCAACTGATTGTCAAATCTACCGCGGTCAACGTGGTCGTATGGA
AATCCGTATCGACGTTCCAGGGATCAGCTGTCACGGCAGTGCTCCTGAGCGTGGCGACAACGCTATCTTCAAAATGGGCC
ACATCCTTGGTGAACTTGAGCAGTTAGCTGGCAACTTAGGCGATGATGCTTTCCTAGGTAAAGGTACATTGACTGTATCT
GAAATCTTCTACACCTCTCCAAGCCGTTGTGCTGTTGCAGATAGCTGTGCAGTGTCTATCGACCGTCGTCTTACTTGGGG
CGAAACTTGGGAAGGCGCACTAGATGAAATTCGCGCTCTACCTGCTGTTAAGAAAGCGGGTGGTGTTGTATCTATGTACG
AATACAACCGTCCTGCTTACACCGGTCTTGTTTACCCAACTGAGTGTTACTTCCCAACTTGGAAGATTGAAGAAGAGCAT
GTTGCAACTAAGACACTAGAAGCGTCTTTTGAACTGCTATTTGACAAGAAGCCTACTGTTGATAAGTGGACTTTCTCTAC
TAACGGCGTATCTATCATGGGTCGTCACGGTATCCCAGTGATCGGTTTCGGTCCTGGTAAAGAGCCAGAGGCTCACGCAC
CAAACGAGAAGACTTGGAAAGATCACCTTGTGACTTGTGCTGCAATGTACGCAGTGATCCCACAGATGTATCTAGCTCAG
CTTAAGAAGTAA

Upstream 100 bases:

>100_bases
CAATGTGAACCCCATAGTCATCTTGTCAAGAACTCAGGCTTAGGACGTTCACACATTACTATTCCCAGCGTTTTAAAGGC
GCTGTTGAAGGAGAAATATA

Downstream 100 bases:

>100_bases
TAAGACTGCACCCTGAGGGCCAACTCCCAGCCCTTAGGGTGATTTCCACCACTCTTTACCCTGATCTGATTCAAGCATTT
TCTTTTTTTTCAGTAGCAAC

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MAIPFNEVLAKAESYKADMTKFLRDMIAIPSESCDEEKVVLRIKEEMEKVGFDKVEIDPMGNVLGYVGHGPHLIAMDAHI
DTVGVGNLDNWDFDPYLGMEDDEVIGGRGTSDQSGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEE
SKIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVPGISCHGSAPERGDNAIFKMGHILGELEQLAGNLGDDAFLGKGTLTVS
EIFYTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVKKAGGVVSMYEYNRPAYTGLVYPTECYFPTWKIEEEH
VATKTLEASFELLFDKKPTVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKDHLVTCAAMYAVIPQMYLAQ
LKK

Sequences:

>Translated_403_residues
MAIPFNEVLAKAESYKADMTKFLRDMIAIPSESCDEEKVVLRIKEEMEKVGFDKVEIDPMGNVLGYVGHGPHLIAMDAHI
DTVGVGNLDNWDFDPYLGMEDDEVIGGRGTSDQSGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEE
SKIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVPGISCHGSAPERGDNAIFKMGHILGELEQLAGNLGDDAFLGKGTLTVS
EIFYTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVKKAGGVVSMYEYNRPAYTGLVYPTECYFPTWKIEEEH
VATKTLEASFELLFDKKPTVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKDHLVTCAAMYAVIPQMYLAQ
LKK
>Mature_402_residues
AIPFNEVLAKAESYKADMTKFLRDMIAIPSESCDEEKVVLRIKEEMEKVGFDKVEIDPMGNVLGYVGHGPHLIAMDAHID
TVGVGNLDNWDFDPYLGMEDDEVIGGRGTSDQSGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEES
KIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVPGISCHGSAPERGDNAIFKMGHILGELEQLAGNLGDDAFLGKGTLTVSE
IFYTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVKKAGGVVSMYEYNRPAYTGLVYPTECYFPTWKIEEEHV
ATKTLEASFELLFDKKPTVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKDHLVTCAAMYAVIPQMYLAQL
KK

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1789236, Length=397, Percent_Identity=84.3828715365239, Blast_Score=711, Evalue=0.0,
Organism=Escherichia coli, GI1790395, Length=374, Percent_Identity=26.2032085561497, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788816, Length=259, Percent_Identity=21.2355212355212, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR017706
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 44591; Mature: 44460

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00639 THIOL_PROTEASE_HIS ; PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPFNEVLAKAESYKADMTKFLRDMIAIPSESCDEEKVVLRIKEEMEKVGFDKVEIDPM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
GNVLGYVGHGPHLIAMDAHIDTVGVGNLDNWDFDPYLGMEDDEVIGGRGTSDQSGGMASM
CCHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEHH
VYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEESKIRPEFVVSTEPTDCQIYR
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEE
GQRGRMEIRIDVPGISCHGSAPERGDNAIFKMGHILGELEQLAGNLGDDAFLGKGTLTVS
CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEE
EIFYTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVKKAGGVVSMYEYNRPAY
HEEECCCCCCEECCHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEECCCCCE
TGLVYPTECYFPTWKIEEEHVATKTLEASFELLFDKKPTVDKWTFSTNGVSIMGRHGIPV
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCEEEEECCCCEE
IGFGPGKEPEAHAPNEKTWKDHLVTCAAMYAVIPQMYLAQLKK
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIPFNEVLAKAESYKADMTKFLRDMIAIPSESCDEEKVVLRIKEEMEKVGFDKVEIDPM
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
GNVLGYVGHGPHLIAMDAHIDTVGVGNLDNWDFDPYLGMEDDEVIGGRGTSDQSGGMASM
CCHHHHCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEHH
VYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEESKIRPEFVVSTEPTDCQIYR
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEE
GQRGRMEIRIDVPGISCHGSAPERGDNAIFKMGHILGELEQLAGNLGDDAFLGKGTLTVS
CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEE
EIFYTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVKKAGGVVSMYEYNRPAY
HEEECCCCCCEECCHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEECCCCCE
TGLVYPTECYFPTWKIEEEHVATKTLEASFELLFDKKPTVDKWTFSTNGVSIMGRHGIPV
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCEEEEECCCCEE
IGFGPGKEPEAHAPNEKTWKDHLVTCAAMYAVIPQMYLAQLKK
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]