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The map label for this gene is 167622559

Identifier: 167622559

GI number: 167622559

Start: 747312

End: 748505

Strand: Direct

Name: 167622559

Synonym: Shal_0619

Alternate gene names: NA

Gene position: 747312-748505 (Clockwise)

Preceding gene: 167622558

Following gene: 167622562

Centisome position: 14.3

GC content: 46.82

Gene sequence:

>1194_bases
ATGAAACTACATAAAATTGCATTGGCTTGCGCCTTATTCCCCTGCTTTTTTGCACAGGCGGGGCAGGAGTATTATGAGGC
GCGCAGCGATGCTATGGGCGGCGCAGGGGTTGCCGCTTCCAACAAAGAGGGCGCCGCCTTCGTTAACCCGGCCCTGCTTG
CGATTAATGCGCATAAAGACAACTCTGCTGTACTGTTGATGCCTGTGCTAGGGATAGATGTGGCTGACAGCGATGACATG
ATAGATAAGTTCGACTCGCTGATTAATTCTTACGATGCTCTTGCTGCTGCAATTGATGCTGAGAACCGTGACGATATTAC
GAAGTTTCGTGATGATCTGGTTGGCGATCTTGAGTCTCTAAAAGGGACTTCAGCCTATGCCAGTGCAGGGCTAGGTTTCA
GTGTTGCCATTCCGCACCAGAGAATGCCGATGGCTATCTTCTATAAGAGCTATGTTAACGCAGTTGGTGTGGCCGACATA
GCCCAGTCAGATATCGATACGCTTAATCATTTGGATCCTGAAAATCCACCCGAAGTCTCTGATCTGAACTCACAAGGCCA
AGTGGTTGGCGGTGCGATATCAGATCTTGGCGTCGCCTTAAGCTTCCCTCTCTCTATCGTGAATATGCCTATCTCTGTTG
GAATATCACCTAAGTTTCAGCGAATTGATACCTACAATTATATCGCCAATGCAAACAACTTCGATGCCAGTGACTTTGAT
GACGTTATGTATCGCAATGATGAGACCAATTTTAATTTAGATGTCGGGGTGGCTATGCAGCCATTTGATGGCTTAACTCT
GGGTCTATCAGGACGAAATCTGATCAGCCAAGATGTGGATACCATAGAGGTGGAAGGGCAGAAGTTTACTTACCGTGTTG
AACCTCTCGTAACAGCAGGCGTAGCTTATGATTGGGAAATTTTATCGGTAACGACTGATATTGATCTGATTGAGAATAAG
AAATTTAAAGAGCTGGATGGTACTCAATACTGGCGTCTAGGCGGGGAAGTGAGAGCCTTCAACTGGATGGCGTTACGCCT
CGGTTATCGCCATGATATGAAAGACTCTACCGCCAACCTCTACTCTTTGGGCACAGGCTTTGCGTTCGGTGATTCATTTT
TCTTAGATTTTACTGGTATGTTCGGCGATGACAATGCGGTAGGAGGGGTGTTGCAAACCTCCTATCATTTCTAA

Upstream 100 bases:

>100_bases
TCTGATTTTGTCTTAGAATACTTTAAGAACAAAATAACCTTTTTTCGATTTGAGCCGTATTGCAGCTTAGAACGTTAAGG
ACATAAAAAGGGTGGAATGG

Downstream 100 bases:

>100_bases
CCAAGCTAACCCATTAGCTCTATTGTTGATTTAACGGTTAGGATAACAGCGCTACAGCCACATAAAGCCAGAGTGAATGC
TCTGGTTTTTTGTTTGTCGA

Product: putative plasmid transfer protein

Products: NA

Alternate protein names: Plasmid Transfer Protein TraF; TraF Protein; Outer Membrane Or Exported; Conjugative Transfer Protein; TraF-Related Protein; Ribonuclease PH; IncI1 Plasmid Conjugative Transfer Protein TraF

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKLHKIALACALFPCFFAQAGQEYYEARSDAMGGAGVAASNKEGAAFVNPALLAINAHKDNSAVLLMPVLGIDVADSDDM
IDKFDSLINSYDALAAAIDAENRDDITKFRDDLVGDLESLKGTSAYASAGLGFSVAIPHQRMPMAIFYKSYVNAVGVADI
AQSDIDTLNHLDPENPPEVSDLNSQGQVVGGAISDLGVALSFPLSIVNMPISVGISPKFQRIDTYNYIANANNFDASDFD
DVMYRNDETNFNLDVGVAMQPFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAGVAYDWEILSVTTDIDLIENK
KFKELDGTQYWRLGGEVRAFNWMALRLGYRHDMKDSTANLYSLGTGFAFGDSFFLDFTGMFGDDNAVGGVLQTSYHF

Sequences:

>Translated_397_residues
MKLHKIALACALFPCFFAQAGQEYYEARSDAMGGAGVAASNKEGAAFVNPALLAINAHKDNSAVLLMPVLGIDVADSDDM
IDKFDSLINSYDALAAAIDAENRDDITKFRDDLVGDLESLKGTSAYASAGLGFSVAIPHQRMPMAIFYKSYVNAVGVADI
AQSDIDTLNHLDPENPPEVSDLNSQGQVVGGAISDLGVALSFPLSIVNMPISVGISPKFQRIDTYNYIANANNFDASDFD
DVMYRNDETNFNLDVGVAMQPFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAGVAYDWEILSVTTDIDLIENK
KFKELDGTQYWRLGGEVRAFNWMALRLGYRHDMKDSTANLYSLGTGFAFGDSFFLDFTGMFGDDNAVGGVLQTSYHF
>Mature_397_residues
MKLHKIALACALFPCFFAQAGQEYYEARSDAMGGAGVAASNKEGAAFVNPALLAINAHKDNSAVLLMPVLGIDVADSDDM
IDKFDSLINSYDALAAAIDAENRDDITKFRDDLVGDLESLKGTSAYASAGLGFSVAIPHQRMPMAIFYKSYVNAVGVADI
AQSDIDTLNHLDPENPPEVSDLNSQGQVVGGAISDLGVALSFPLSIVNMPISVGISPKFQRIDTYNYIANANNFDASDFD
DVMYRNDETNFNLDVGVAMQPFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAGVAYDWEILSVTTDIDLIENK
KFKELDGTQYWRLGGEVRAFNWMALRLGYRHDMKDSTANLYSLGTGFAFGDSFFLDFTGMFGDDNAVGGVLQTSYHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43156; Mature: 43156

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHKIALACALFPCFFAQAGQEYYEARSDAMGGAGVAASNKEGAAFVNPALLAINAHKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCEEEEEECCCC
NSAVLLMPVLGIDVADSDDMIDKFDSLINSYDALAAAIDAENRDDITKFRDDLVGDLESL
CCEEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
KGTSAYASAGLGFSVAIPHQRMPMAIFYKSYVNAVGVADIAQSDIDTLNHLDPENPPEVS
CCCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
DLNSQGQVVGGAISDLGVALSFPLSIVNMPISVGISPKFQRIDTYNYIANANNFDASDFD
CCCCCCCEEECHHHHCCCCEECCCEEECCCEEECCCCCHHEEECCCEEECCCCCCCCCCH
DVMYRNDETNFNLDVGVAMQPFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAG
HHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHCCCCEEEECCCEEEEEECCEEEEC
VAYDWEILSVTTDIDLIENKKFKELDGTQYWRLGGEVRAFNWMALRLGYRHDMKDSTANL
CEECEEEEEEEECCCHHCCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCCCCCCCCE
YSLGTGFAFGDSFFLDFTGMFGDDNAVGGVLQTSYHF
EECCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MKLHKIALACALFPCFFAQAGQEYYEARSDAMGGAGVAASNKEGAAFVNPALLAINAHKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCEEEEEECCCC
NSAVLLMPVLGIDVADSDDMIDKFDSLINSYDALAAAIDAENRDDITKFRDDLVGDLESL
CCEEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
KGTSAYASAGLGFSVAIPHQRMPMAIFYKSYVNAVGVADIAQSDIDTLNHLDPENPPEVS
CCCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
DLNSQGQVVGGAISDLGVALSFPLSIVNMPISVGISPKFQRIDTYNYIANANNFDASDFD
CCCCCCCEEECHHHHCCCCEECCCEEECCCEEECCCCCHHEEECCCEEECCCCCCCCCCH
DVMYRNDETNFNLDVGVAMQPFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAG
HHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHCCCCEEEECCCEEEEEECCEEEEC
VAYDWEILSVTTDIDLIENKKFKELDGTQYWRLGGEVRAFNWMALRLGYRHDMKDSTANL
CEECEEEEEEEECCCHHCCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCCCCCCCCE
YSLGTGFAFGDSFFLDFTGMFGDDNAVGGVLQTSYHF
EECCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA