Click here to switch to the map view.

The map label for this gene is 167622555

Identifier: 167622555

GI number: 167622555

Start: 742700

End: 744412

Strand: Reverse

Name: 167622555

Synonym: Shal_0615

Alternate gene names: NA

Gene position: 744412-742700 (Counterclockwise)

Preceding gene: 167622556

Following gene: 167622554

Centisome position: 14.24

GC content: 50.26

Gene sequence:

>1713_bases
ATGCGTACCCTTATATCATTGCTTGTTGCCAATGCTATCGCTTTCTCTGGCAGCGTCTATGCAAACGAAAATGATGCTCA
AAAAATTGCCGACCTCAAACAGCAACTCGAAGAGATCACCAACGAAATTGACGATCTCAATGATCGCGTCGATCAAAACG
AACGCCATACCGCCCTCGACCGTATCGAGCTAACGGGCGATTTTCGCACCAAGGCTCACTCGCTACATTATCGAAACGTC
ACCTGGAACCCGGCTATCAAGGTCAACTTTAATGATTTCGGTGCCAAAGCGATGGCAGGTGATTTTGGTATGCCAAATGA
TCCTAACTCCCCCCTAGGTAAGATGATGGCCGCGGATCCCAACCTCGCAGCCGCATTTCAAAGCGGACAGCTTCAAGGAG
TCATGCCCTATGTCTTAGCGCAAAAAACGACTCAAGATATCGACAATGACATCCTCTACACCACAAGGTTACGCCTCAAC
CTAAAAGCTAAGGTGTGGGATAACGTTAGCTTTGCAGGCCGACTCTCTATGTATAAGAACTGGGGCGACTCAACTGGCGT
TCAAGTATTCGATTCTTGGCGTTCATTCACTATGGATGGCACCAACAGCGGTAATACCAGTGGCGACTGGTTAAGAGTAG
AGCGCGCCTACTTCGACTGGAAAAACATCAATGGCTCGCCGCTCTACCTATCTATTGGACGTCGCCCTTCAACCTATGGC
CCACCGACTCAGTACCGTGAAAACGAAAAGCGTGGCGGCACCCCATCGGGCCACCTAGTCAACTTTAACTTTGATGGTGC
CACCTTAGGCTACAAGCTAGGGGAATTGACGGGTGTCGAAGGCCAAGTGGTTCGCATCTGCTACGGTCAAGGTTTTGAAT
CTCAATGGGGTAACGGCGAGATGTTTGGCGATATCGTCACTAAAGACACTCACCTTGGCGGCTTCAATATCGATGCGATA
AATGATGGTAGAAACTTCCTGCAATTCACCCTGTTTGGCGCCAAAGATGTCAACGATGGCTTTAAAGGCACCATGGCCTT
CCCCACTCAGCTAGCCGGTATTTTTGCCCCAACCATGTACCAAGATATGCAGAAGTTCAGCAACTTTAACTTCGAGACTC
GAGTACAACCAAGCGGCGTCATTGGTGACATGTTCCTCGGCGGAATTGGTTTCGCACGTGAGGAAGATAACGACGTGAAA
TGGTTCGTCTCTGGTGGCTGGACTCGCGCCGAAGGCAACGGCAATGCCGGTATGTTTGGTGGCATGCTCAGCGATGCGGT
ATTTGAAGCGCAGCTCAATGCCGATGGTAGTGAGATTATTATGATGGCCGCTAATGCAGAAGATAGCGATCCTAAGGATG
GCTACGGTGTCTATGTCGGTGTTCAGATCCCGGCGCCTTACGGCAAGGTTGGCTTTGAATATAACTATGGTTCTGAATAC
TGGACTCCATTCACCCAGGCGCAAGATGACCCTATCGGCAGCAAGCTTGCGACCCGCGGCCATGTCGGCGAAGCCTATTA
CATGTTTGATATCAATCCACGCATGTTCATCAAGCTAGCAGGCCTCTACTACGACTATGAATATACCGGTAGCGGTACTC
CCGTTGGTGCTCCGCAGGATATCGATGAGGTCATCGCTGGCACAGCTTACTCCATGCTGCCAGTTGTCGACACGGCCTTC
GATATTAACGCCTCTGTCACCGTCAACTTCTAA

Upstream 100 bases:

>100_bases
CTTCATGCTGCCAAAAATCAGCAGTTCTGAGTAACCGCCTTAAACTGAGTCGAGTTTAATTGATTGAAAATAAATTAAAA
ACTCGAAAAGGAGAGATATT

Downstream 100 bases:

>100_bases
CGCCACTCAGATACTCCTCGGTTAACGCCGAGGAGATGGAGCATATTTATGAAAACCTTACCCATCACACTGAGCCTGCT
AACAGCGCTACTGTACTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MRTLISLLVANAIAFSGSVYANENDAQKIADLKQQLEEITNEIDDLNDRVDQNERHTALDRIELTGDFRTKAHSLHYRNV
TWNPAIKVNFNDFGAKAMAGDFGMPNDPNSPLGKMMAADPNLAAAFQSGQLQGVMPYVLAQKTTQDIDNDILYTTRLRLN
LKAKVWDNVSFAGRLSMYKNWGDSTGVQVFDSWRSFTMDGTNSGNTSGDWLRVERAYFDWKNINGSPLYLSIGRRPSTYG
PPTQYRENEKRGGTPSGHLVNFNFDGATLGYKLGELTGVEGQVVRICYGQGFESQWGNGEMFGDIVTKDTHLGGFNIDAI
NDGRNFLQFTLFGAKDVNDGFKGTMAFPTQLAGIFAPTMYQDMQKFSNFNFETRVQPSGVIGDMFLGGIGFAREEDNDVK
WFVSGGWTRAEGNGNAGMFGGMLSDAVFEAQLNADGSEIIMMAANAEDSDPKDGYGVYVGVQIPAPYGKVGFEYNYGSEY
WTPFTQAQDDPIGSKLATRGHVGEAYYMFDINPRMFIKLAGLYYDYEYTGSGTPVGAPQDIDEVIAGTAYSMLPVVDTAF
DINASVTVNF

Sequences:

>Translated_570_residues
MRTLISLLVANAIAFSGSVYANENDAQKIADLKQQLEEITNEIDDLNDRVDQNERHTALDRIELTGDFRTKAHSLHYRNV
TWNPAIKVNFNDFGAKAMAGDFGMPNDPNSPLGKMMAADPNLAAAFQSGQLQGVMPYVLAQKTTQDIDNDILYTTRLRLN
LKAKVWDNVSFAGRLSMYKNWGDSTGVQVFDSWRSFTMDGTNSGNTSGDWLRVERAYFDWKNINGSPLYLSIGRRPSTYG
PPTQYRENEKRGGTPSGHLVNFNFDGATLGYKLGELTGVEGQVVRICYGQGFESQWGNGEMFGDIVTKDTHLGGFNIDAI
NDGRNFLQFTLFGAKDVNDGFKGTMAFPTQLAGIFAPTMYQDMQKFSNFNFETRVQPSGVIGDMFLGGIGFAREEDNDVK
WFVSGGWTRAEGNGNAGMFGGMLSDAVFEAQLNADGSEIIMMAANAEDSDPKDGYGVYVGVQIPAPYGKVGFEYNYGSEY
WTPFTQAQDDPIGSKLATRGHVGEAYYMFDINPRMFIKLAGLYYDYEYTGSGTPVGAPQDIDEVIAGTAYSMLPVVDTAF
DINASVTVNF
>Mature_570_residues
MRTLISLLVANAIAFSGSVYANENDAQKIADLKQQLEEITNEIDDLNDRVDQNERHTALDRIELTGDFRTKAHSLHYRNV
TWNPAIKVNFNDFGAKAMAGDFGMPNDPNSPLGKMMAADPNLAAAFQSGQLQGVMPYVLAQKTTQDIDNDILYTTRLRLN
LKAKVWDNVSFAGRLSMYKNWGDSTGVQVFDSWRSFTMDGTNSGNTSGDWLRVERAYFDWKNINGSPLYLSIGRRPSTYG
PPTQYRENEKRGGTPSGHLVNFNFDGATLGYKLGELTGVEGQVVRICYGQGFESQWGNGEMFGDIVTKDTHLGGFNIDAI
NDGRNFLQFTLFGAKDVNDGFKGTMAFPTQLAGIFAPTMYQDMQKFSNFNFETRVQPSGVIGDMFLGGIGFAREEDNDVK
WFVSGGWTRAEGNGNAGMFGGMLSDAVFEAQLNADGSEIIMMAANAEDSDPKDGYGVYVGVQIPAPYGKVGFEYNYGSEY
WTPFTQAQDDPIGSKLATRGHVGEAYYMFDINPRMFIKLAGLYYDYEYTGSGTPVGAPQDIDEVIAGTAYSMLPVVDTAF
DINASVTVNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62838; Mature: 62838

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLISLLVANAIAFSGSVYANENDAQKIADLKQQLEEITNEIDDLNDRVDQNERHTALD
CHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHE
RIELTGDFRTKAHSLHYRNVTWNPAIKVNFNDFGAKAMAGDFGMPNDPNSPLGKMMAADP
EEEEECCCCCCEEEEEEECEEECCEEEEEECCCCCHHEECCCCCCCCCCCCHHHHEECCC
NLAAAFQSGQLQGVMPYVLAQKTTQDIDNDILYTTRLRLNLKAKVWDNVSFAGRLSMYKN
CCEEHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCEEEEHHHHHC
WGDSTGVQVFDSWRSFTMDGTNSGNTSGDWLRVERAYFDWKNINGSPLYLSIGRRPSTYG
CCCCCCCCEEECCHHEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCCCCC
PPTQYRENEKRGGTPSGHLVNFNFDGATLGYKLGELTGVEGQVVRICYGQGFESQWGNGE
CCCCCCCCCCCCCCCCCCEEEEECCCCEECEEHHCCCCCCCCEEEEEECCCCCCCCCCCC
MFGDIVTKDTHLGGFNIDAINDGRNFLQFTLFGAKDVNDGFKGTMAFPTQLAGIFAPTMY
EEEEEEECCEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHH
QDMQKFSNFNFETRVQPSGVIGDMFLGGIGFAREEDNDVKWFVSGGWTRAEGNGNAGMFG
HHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCHH
GMLSDAVFEAQLNADGSEIIMMAANAEDSDPKDGYGVYVGVQIPAPYGKVGFEYNYGSEY
HHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCC
WTPFTQAQDDPIGSKLATRGHVGEAYYMFDINPRMFIKLAGLYYDYEYTGSGTPVGAPQD
CCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCC
IDEVIAGTAYSMLPVVDTAFDINASVTVNF
HHHHHHCCHHHHHHHHEEEEECCEEEEEEC
>Mature Secondary Structure
MRTLISLLVANAIAFSGSVYANENDAQKIADLKQQLEEITNEIDDLNDRVDQNERHTALD
CHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHE
RIELTGDFRTKAHSLHYRNVTWNPAIKVNFNDFGAKAMAGDFGMPNDPNSPLGKMMAADP
EEEEECCCCCCEEEEEEECEEECCEEEEEECCCCCHHEECCCCCCCCCCCCHHHHEECCC
NLAAAFQSGQLQGVMPYVLAQKTTQDIDNDILYTTRLRLNLKAKVWDNVSFAGRLSMYKN
CCEEHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCEEEEHHHHHC
WGDSTGVQVFDSWRSFTMDGTNSGNTSGDWLRVERAYFDWKNINGSPLYLSIGRRPSTYG
CCCCCCCCEEECCHHEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCCCCC
PPTQYRENEKRGGTPSGHLVNFNFDGATLGYKLGELTGVEGQVVRICYGQGFESQWGNGE
CCCCCCCCCCCCCCCCCCEEEEECCCCEECEEHHCCCCCCCCEEEEEECCCCCCCCCCCC
MFGDIVTKDTHLGGFNIDAINDGRNFLQFTLFGAKDVNDGFKGTMAFPTQLAGIFAPTMY
EEEEEEECCEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHH
QDMQKFSNFNFETRVQPSGVIGDMFLGGIGFAREEDNDVKWFVSGGWTRAEGNGNAGMFG
HHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCHH
GMLSDAVFEAQLNADGSEIIMMAANAEDSDPKDGYGVYVGVQIPAPYGKVGFEYNYGSEY
HHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCC
WTPFTQAQDDPIGSKLATRGHVGEAYYMFDINPRMFIKLAGLYYDYEYTGSGTPVGAPQD
CCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCC
IDEVIAGTAYSMLPVVDTAFDINASVTVNF
HHHHHHCCHHHHHHHHEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA