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The map label for this gene is 167622554

Identifier: 167622554

GI number: 167622554

Start: 741254

End: 742651

Strand: Reverse

Name: 167622554

Synonym: Shal_0614

Alternate gene names: NA

Gene position: 742651-741254 (Counterclockwise)

Preceding gene: 167622555

Following gene: 167622553

Centisome position: 14.21

GC content: 49.0

Gene sequence:

>1398_bases
ATGAAAACCTTACCCATCACACTGAGCCTGCTAACAGCGCTACTGTACTGCACTAGTAGTTGGGCGGCTCAAGATCATAG
TGAGTTTATTGAAGGCCCCTTTAGTAAAGGCTCAGATGTCACGACCCAGTGCATTGAGTGTCACGAAGATCATGCCGCCG
ACTTTATGAAATCGTCGCACTGGACCTGGGAGCTGGAACAGACTCTCTCTGGGCGCACCGTCAAGCGGGGCAAGAAAAAC
ACCATCAATAACTTCTGCGTCGCCATCTCAAGTAACGAACCTCGCTGCACTAGCTGTCATGCGGGATATGGCTGGAAAGA
TAATAACTTCGACTTTAGCGATATGACCAAGGTCGACTGTCTCATCTGTCATGACACCACGGGCACCTATGTTAAAGATC
CCGCTGGCGCTGGAGAAGTCTCTAGCAAGGTGAACCTTGAACGGGTCGCCAAAAATGTCGGTACGCCAGTACGAGATAAC
TGCGGTACCTGTCACTTCTATGGTGGCGGCGGGGATGGTGTTAAACATGGCGATCTCGACTCTTCGATGGCCTATCCAGA
CAAACGCACCGATGTGCATATGGATGTCGACGGTAATGATTTCCCGTGTCAGGAGTGTCACACCACTAAAGAGCATCAGA
TCACCGGTAACGCCATGGGGGTCTCTCCTGGCGGTGACAATCCTATTGGCTGTAACAACTGCCATGATAGCGCGCCCCAT
GAAAAGCAGAAGCTCAATGACCATGGTCAGGCGATAGCTTGCCAAACCTGTCACATACCAGAGTTTGCTAAAAACGAACC
CACTAAGATGAATTGGGATTGGTCTACAGCGGGCTCCAGTCGTGAGCAGACTGTTGATGAGTATGGCAAGCACAGCTATA
TGAAGAAGAAGGGCGACTTCGTCTGGGCTAAGAATGTAACACCTCAATATGCTTGGTATAACGGCAAGGCCGACGCCTAT
ATGGCTGGCGATAAGATGCAGGCAGATTCTGTCACTAAACTGACTTATCCATTAGGCGATATCAATGATCTCCATGCCAA
AATCACCCCTTTCAAGGTACACACGGGCAAGCAGATCTATGACAAGAAGTTAAATATCTTCATTACTCCTAAAGTGTTTG
GCAAGGGAGGCTACTGGAAAACCTTCGACTGGGATGAAGCCGCGAGGTTAGGTATGGAACAAAACCCAAATATGGTCGAT
AAAGGGATAAAATACAGTGGTGAATATGGCTTTGCCGCAACTGAAATGTGGTGGCCAATCAATCATATGGTCTCACCTAA
AGAGGACGCCCTTAAGTGTAAAGATTGTCACAGCCAGCAAGGCCGACTCGACTGGCAGGCCCTAGGTTATGACGGCGATC
CCATGAAAGTTAAAGGAGGGCAAAAACACACCAAGTAA

Upstream 100 bases:

>100_bases
AGTTGTCGACACGGCCTTCGATATTAACGCCTCTGTCACCGTCAACTTCTAACGCCACTCAGATACTCCTCGGTTAACGC
CGAGGAGATGGAGCATATTT

Downstream 100 bases:

>100_bases
CCAGTCACTAGAGCAAGTACTGAAACTGCTAATCAAACAACGACCAGAAACAGCCATCCCACCAACTAGCCTTGCTACCT
CTCCTTAGCAAGGCTATTCG

Product: cytochrome c

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Chain A; Class III Cytochrome C

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKTLPITLSLLTALLYCTSSWAAQDHSEFIEGPFSKGSDVTTQCIECHEDHAADFMKSSHWTWELEQTLSGRTVKRGKKN
TINNFCVAISSNEPRCTSCHAGYGWKDNNFDFSDMTKVDCLICHDTTGTYVKDPAGAGEVSSKVNLERVAKNVGTPVRDN
CGTCHFYGGGGDGVKHGDLDSSMAYPDKRTDVHMDVDGNDFPCQECHTTKEHQITGNAMGVSPGGDNPIGCNNCHDSAPH
EKQKLNDHGQAIACQTCHIPEFAKNEPTKMNWDWSTAGSSREQTVDEYGKHSYMKKKGDFVWAKNVTPQYAWYNGKADAY
MAGDKMQADSVTKLTYPLGDINDLHAKITPFKVHTGKQIYDKKLNIFITPKVFGKGGYWKTFDWDEAARLGMEQNPNMVD
KGIKYSGEYGFAATEMWWPINHMVSPKEDALKCKDCHSQQGRLDWQALGYDGDPMKVKGGQKHTK

Sequences:

>Translated_465_residues
MKTLPITLSLLTALLYCTSSWAAQDHSEFIEGPFSKGSDVTTQCIECHEDHAADFMKSSHWTWELEQTLSGRTVKRGKKN
TINNFCVAISSNEPRCTSCHAGYGWKDNNFDFSDMTKVDCLICHDTTGTYVKDPAGAGEVSSKVNLERVAKNVGTPVRDN
CGTCHFYGGGGDGVKHGDLDSSMAYPDKRTDVHMDVDGNDFPCQECHTTKEHQITGNAMGVSPGGDNPIGCNNCHDSAPH
EKQKLNDHGQAIACQTCHIPEFAKNEPTKMNWDWSTAGSSREQTVDEYGKHSYMKKKGDFVWAKNVTPQYAWYNGKADAY
MAGDKMQADSVTKLTYPLGDINDLHAKITPFKVHTGKQIYDKKLNIFITPKVFGKGGYWKTFDWDEAARLGMEQNPNMVD
KGIKYSGEYGFAATEMWWPINHMVSPKEDALKCKDCHSQQGRLDWQALGYDGDPMKVKGGQKHTK
>Mature_465_residues
MKTLPITLSLLTALLYCTSSWAAQDHSEFIEGPFSKGSDVTTQCIECHEDHAADFMKSSHWTWELEQTLSGRTVKRGKKN
TINNFCVAISSNEPRCTSCHAGYGWKDNNFDFSDMTKVDCLICHDTTGTYVKDPAGAGEVSSKVNLERVAKNVGTPVRDN
CGTCHFYGGGGDGVKHGDLDSSMAYPDKRTDVHMDVDGNDFPCQECHTTKEHQITGNAMGVSPGGDNPIGCNNCHDSAPH
EKQKLNDHGQAIACQTCHIPEFAKNEPTKMNWDWSTAGSSREQTVDEYGKHSYMKKKGDFVWAKNVTPQYAWYNGKADAY
MAGDKMQADSVTKLTYPLGDINDLHAKITPFKVHTGKQIYDKKLNIFITPKVFGKGGYWKTFDWDEAARLGMEQNPNMVD
KGIKYSGEYGFAATEMWWPINHMVSPKEDALKCKDCHSQQGRLDWQALGYDGDPMKVKGGQKHTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51779; Mature: 51779

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLPITLSLLTALLYCTSSWAAQDHSEFIEGPFSKGSDVTTQCIECHEDHAADFMKSSH
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
WTWELEQTLSGRTVKRGKKNTINNFCVAISSNEPRCTSCHAGYGWKDNNFDFSDMTKVDC
CEEEEHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEEE
LICHDTTGTYVKDPAGAGEVSSKVNLERVAKNVGTPVRDNCGTCHFYGGGGDGVKHGDLD
EEEECCCCCEEECCCCCCCCHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
SSMAYPDKRTDVHMDVDGNDFPCQECHTTKEHQITGNAMGVSPGGDNPIGCNNCHDSAPH
CCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCEECCCEEECCCCCCCCCCCCCCCCCCCH
EKQKLNDHGQAIACQTCHIPEFAKNEPTKMNWDWSTAGSSREQTVDEYGKHSYMKKKGDF
HHHHHCCCCCEEEEEECCCCHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
VWAKNVTPQYAWYNGKADAYMAGDKMQADSVTKLTYPLGDINDLHAKITPFKVHTGKQIY
EEECCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCHHH
DKKLNIFITPKVFGKGGYWKTFDWDEAARLGMEQNPNMVDKGIKYSGEYGFAATEMWWPI
CCCEEEEECCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHCCCEECCCCCEEEHEEECCH
NHMVSPKEDALKCKDCHSQQGRLDWQALGYDGDPMKVKGGQKHTK
HHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKTLPITLSLLTALLYCTSSWAAQDHSEFIEGPFSKGSDVTTQCIECHEDHAADFMKSSH
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
WTWELEQTLSGRTVKRGKKNTINNFCVAISSNEPRCTSCHAGYGWKDNNFDFSDMTKVDC
CEEEEHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEEE
LICHDTTGTYVKDPAGAGEVSSKVNLERVAKNVGTPVRDNCGTCHFYGGGGDGVKHGDLD
EEEECCCCCEEECCCCCCCCHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
SSMAYPDKRTDVHMDVDGNDFPCQECHTTKEHQITGNAMGVSPGGDNPIGCNNCHDSAPH
CCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCEECCCEEECCCCCCCCCCCCCCCCCCCH
EKQKLNDHGQAIACQTCHIPEFAKNEPTKMNWDWSTAGSSREQTVDEYGKHSYMKKKGDF
HHHHHCCCCCEEEEEECCCCHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
VWAKNVTPQYAWYNGKADAYMAGDKMQADSVTKLTYPLGDINDLHAKITPFKVHTGKQIY
EEECCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCHHH
DKKLNIFITPKVFGKGGYWKTFDWDEAARLGMEQNPNMVDKGIKYSGEYGFAATEMWWPI
CCCEEEEECCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHCCCEECCCCCEEEHEEECCH
NHMVSPKEDALKCKDCHSQQGRLDWQALGYDGDPMKVKGGQKHTK
HHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA