| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622553
Identifier: 167622553
GI number: 167622553
Start: 739707
End: 740855
Strand: Reverse
Name: 167622553
Synonym: Shal_0613
Alternate gene names: NA
Gene position: 740855-739707 (Counterclockwise)
Preceding gene: 167622554
Following gene: 167622549
Centisome position: 14.17
GC content: 48.65
Gene sequence:
>1149_bases ATGAGATGTAAGACCAACCGATTCGATAGTGTTAACCAATATTCAGGAGAGTTTAGCGGCGCCTTCGCCGATTTAGGTAC CTTTTTACCCTTAGTGCTCGGCCTTATTGCCCTAAACCATTTTTCCCCTCAGGGGATTTTTATGGGGTTTGGCTTGTTTG CCCTGTTTACCGCTTTTTATTATCGTCGTCCCATTCCGGTACAGCCGATGAAAGTGATCGCCGCGCTGGTGATTGCCCAA GGACTCTCGCCCGGTATGCTGCAAGCTAGCGGTATATTGATGGGGGTTATTCTATTAGTGCTCGCCTATAGCGGCGCTAT CAAATGGATGGCTAAGCAGTTGTCTCCCGCCATTAGTATCGGCATTCAGCTAGCCATAGGCCTACAGCTAATCTGGATGG GCGGCCAGATGATGAACCAAACTTGGTATATCGGCTTCGTTGCATTTATCGCCCTATTCGCCAGTAAATTCTTTCCCATG CGCTATTTGGCGATGCCACTAGTCTTAGCCCTAGGTATTTTATGGCAACTTAATAGCGGTACAGCCCCAAGCTTTGATCT TTCAGTCTATACGCCATGGCAGTTAAGTTGGCCCAGCTTAGATGAATGGAGTTCGGCCGTTGGTTTATTAGTGTTACCAC AGCTGGCATTAACCCTGACCAATGCGGTTATCGCCACCTCTGCGATGGCTAAACAAAAGTTTCCTGAAGACAATAAAGAG AACTTTGCCCCTCAGCGATTTGCCACCAGCTCAGGCTGGGCTAACTTACTGCTGGCTCCGTTTGGTGCAATGGCTATGTG CCACGGTGCTGGCGGCCTTGCGGTGCAACATCACTTTGGTGCGAGAACCTGGCTAGCCCCAACCATTTTTGGTAGTAGCT GTTTGCTAATCGCCGCCTTTTGGGGCCAAGGCATTGCCACCGTTTTATCACTTATCCCACTTGCCGTTTTAGGTAGCTTA CTGGCGATAGCGGGAACCCAGTTAGCTTGGTCACAACGATTCATCGACGGTAAACCATTCTGTATTTTTGTGATCCTATC CACCGCTGCGATCTGTTTGCTAATTAACACGGCTGCGGGATTAGCCACAGGATTCATTCTTGAGATGGGACGACGTCAAT GGCATATCTACTCTGATCTAAAATCTTAA
Upstream 100 bases:
>100_bases GACAATTGCCGTCTTAACAGCATTTTGTTCCCAATTTTCGGCATTAAAACTGGCATCATTCTTGCGATAGTTTAAGTGTT CTTTTCCCACGGCAAGCTAT
Downstream 100 bases:
>100_bases GCCTAGCTAGGCACTTATGGAGTTATCGACTCCATAAGTGCAATCTAAATGTTGTAGCAAAACGATGTTCTTTGTTATCG AAAAGCGCCCCCAGCACAAC
Product: sulfate transporter
Products: NA
Alternate protein names: Sulfate Permease; Xanthine/Uracil/Vitamin C Permease; MFS Superfamily Sulfate Permease; Sulfate Transporter Family Permease; Sulfate Permease SulP; Sulfate Permease-Like Transporter Mfs Superfamily; Sulfate Permease-Like Transporter MFS Superfamily
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRCKTNRFDSVNQYSGEFSGAFADLGTFLPLVLGLIALNHFSPQGIFMGFGLFALFTAFYYRRPIPVQPMKVIAALVIAQ GLSPGMLQASGILMGVILLVLAYSGAIKWMAKQLSPAISIGIQLAIGLQLIWMGGQMMNQTWYIGFVAFIALFASKFFPM RYLAMPLVLALGILWQLNSGTAPSFDLSVYTPWQLSWPSLDEWSSAVGLLVLPQLALTLTNAVIATSAMAKQKFPEDNKE NFAPQRFATSSGWANLLLAPFGAMAMCHGAGGLAVQHHFGARTWLAPTIFGSSCLLIAAFWGQGIATVLSLIPLAVLGSL LAIAGTQLAWSQRFIDGKPFCIFVILSTAAICLLINTAAGLATGFILEMGRRQWHIYSDLKS
Sequences:
>Translated_382_residues MRCKTNRFDSVNQYSGEFSGAFADLGTFLPLVLGLIALNHFSPQGIFMGFGLFALFTAFYYRRPIPVQPMKVIAALVIAQ GLSPGMLQASGILMGVILLVLAYSGAIKWMAKQLSPAISIGIQLAIGLQLIWMGGQMMNQTWYIGFVAFIALFASKFFPM RYLAMPLVLALGILWQLNSGTAPSFDLSVYTPWQLSWPSLDEWSSAVGLLVLPQLALTLTNAVIATSAMAKQKFPEDNKE NFAPQRFATSSGWANLLLAPFGAMAMCHGAGGLAVQHHFGARTWLAPTIFGSSCLLIAAFWGQGIATVLSLIPLAVLGSL LAIAGTQLAWSQRFIDGKPFCIFVILSTAAICLLINTAAGLATGFILEMGRRQWHIYSDLKS >Mature_382_residues MRCKTNRFDSVNQYSGEFSGAFADLGTFLPLVLGLIALNHFSPQGIFMGFGLFALFTAFYYRRPIPVQPMKVIAALVIAQ GLSPGMLQASGILMGVILLVLAYSGAIKWMAKQLSPAISIGIQLAIGLQLIWMGGQMMNQTWYIGFVAFIALFASKFFPM RYLAMPLVLALGILWQLNSGTAPSFDLSVYTPWQLSWPSLDEWSSAVGLLVLPQLALTLTNAVIATSAMAKQKFPEDNKE NFAPQRFATSSGWANLLLAPFGAMAMCHGAGGLAVQHHFGARTWLAPTIFGSSCLLIAAFWGQGIATVLSLIPLAVLGSL LAIAGTQLAWSQRFIDGKPFCIFVILSTAAICLLINTAAGLATGFILEMGRRQWHIYSDLKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41301; Mature: 41301
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCKTNRFDSVNQYSGEFSGAFADLGTFLPLVLGLIALNHFSPQGIFMGFGLFALFTAFY CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YRRPIPVQPMKVIAALVIAQGLSPGMLQASGILMGVILLVLAYSGAIKWMAKQLSPAISI HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GIQLAIGLQLIWMGGQMMNQTWYIGFVAFIALFASKFFPMRYLAMPLVLALGILWQLNSG HHHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC TAPSFDLSVYTPWQLSWPSLDEWSSAVGLLVLPQLALTLTNAVIATSAMAKQKFPEDNKE CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NFAPQRFATSSGWANLLLAPFGAMAMCHGAGGLAVQHHFGARTWLAPTIFGSSCLLIAAF CCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHH WGQGIATVLSLIPLAVLGSLLAIAGTQLAWSQRFIDGKPFCIFVILSTAAICLLINTAAG HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LATGFILEMGRRQWHIYSDLKS HHHHHHHHHCCCCEEHHHCCCC >Mature Secondary Structure MRCKTNRFDSVNQYSGEFSGAFADLGTFLPLVLGLIALNHFSPQGIFMGFGLFALFTAFY CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YRRPIPVQPMKVIAALVIAQGLSPGMLQASGILMGVILLVLAYSGAIKWMAKQLSPAISI HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GIQLAIGLQLIWMGGQMMNQTWYIGFVAFIALFASKFFPMRYLAMPLVLALGILWQLNSG HHHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC TAPSFDLSVYTPWQLSWPSLDEWSSAVGLLVLPQLALTLTNAVIATSAMAKQKFPEDNKE CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NFAPQRFATSSGWANLLLAPFGAMAMCHGAGGLAVQHHFGARTWLAPTIFGSSCLLIAAF CCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHH WGQGIATVLSLIPLAVLGSLLAIAGTQLAWSQRFIDGKPFCIFVILSTAAICLLINTAAG HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LATGFILEMGRRQWHIYSDLKS HHHHHHHHHCCCCEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA