| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is tyrP [H]
Identifier: 167622529
GI number: 167622529
Start: 705955
End: 707157
Strand: Direct
Name: tyrP [H]
Synonym: Shal_0589
Alternate gene names: 167622529
Gene position: 705955-707157 (Clockwise)
Preceding gene: 167622526
Following gene: 167622530
Centisome position: 13.51
GC content: 47.13
Gene sequence:
>1203_bases ATGAACAAAAGTAAAATCTTCGGCAGTATGCTGATTATTGCGGGTACCACAATCGGTGCCGGTATGTTGGCATTACCTCT CGCAGCATCGGGTCTTGGCTTTGGCATGGCGAGCATTATCATGCTCTTGATTTGGTCTTTGATGACCTATACCGCACTGC TTATGATTGAAGTGCATCAACATGCGCCAGTCGATGCCACGCTGCACACGCTGGCACACAAACTATTGGGTCGTAAAGGA CAAGTCATAGCAAGCTTTGCAATGATGTTTCTCTTCTACGCATTATGTGCTGCTTATATTGCCGGTGGCGGTGAGCAGAT CCACAGTAAATTAACCAACTGGTTTGGACTCGAGCTGCCGATGCAAGCTGGCGCAATTATCTTTACCTTGCTAATCGGTA CCGTTGTGGCCATAGGCACTCGTTCGGTCGATATGATTAATCGAAGCCTGTTCTCGCTTAAGCTTATCGCGTTAGTGGTG ATGTTGTTTCTGTTACTGCCCCATGTTTCTGTCGAGAATTTAGTCGCTTTACCTGTACATCAAGGCTTGGTATTTGCCTC TCTGCCAGTGATATTCACCTCTTTTGGCTTTCACGGCTCTATTCCATCAGTGGTGCGCTACTTAGGTAAAGATACCAAGG CGCTGCGCTGGATCATTGTCGTGGGCTCTGCATTGCCGCTAATGATATATGTGTTATGGATGTTAGCCAGCCAAGGGGTA TTGCCTCAGCAAGATCTAATGGCTAGCCAAAGTCTGAATGGCTTTATTGGTTCTCTGAGCCGAATGCTAGAAAACCCTAT GATTGCTAATGCGGTATCTATCTTTGCCGATCTAGCGTTAGCGACATCATTCCTTGGGGTGAGTTTAGGCCTGTTCGACT TTATCGGTGACTTACTAAAGCGTAGCACTAAGGCTAGTCACAGAGTGCAGGTAGGCTTAGTGACTTTCTTACCGCCACTG GGTTTTGCATTGTTCTACCCTCAAGGTTTTATCACTGCACTGGGCTATGCGGCTTTTGCTTTAGTGATTTTGGCAGTGTT TTTGCCAGTCGCTATGGTTAGCGCACAGCGTAAGCAAGCAGGCTTGCAAGGGTATCGAGTGAAAGGCGGCAACTTGGGTT TGATCGCGGCAACATTAGCTGGTGTATTGATCATTAGCGTCCAGCTTATGCAGATTTTTAATCTGTTGCCTGCGGTAGGT TGA
Upstream 100 bases:
>100_bases CATGTTTTAAATCACTCCATTGTGGCAATTCCATCTTTCGGAAGCTGGCCACCATCAAAGCCTGTTCCGAGCACTTTATC GTTAATTTGGAACACCATAA
Downstream 100 bases:
>100_bases TAGGTTACAAATTTATAAAAGACACTTATCTTGCTGAGTAATTGACTGAAAAATAGCTGATTAAGCAATATTTTGCCTTG TTGGTTGTTTTTTTAGTCAT
Product: aromatic amino acid transporter
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNKSKIFGSMLIIAGTTIGAGMLALPLAASGLGFGMASIIMLLIWSLMTYTALLMIEVHQHAPVDATLHTLAHKLLGRKG QVIASFAMMFLFYALCAAYIAGGGEQIHSKLTNWFGLELPMQAGAIIFTLLIGTVVAIGTRSVDMINRSLFSLKLIALVV MLFLLLPHVSVENLVALPVHQGLVFASLPVIFTSFGFHGSIPSVVRYLGKDTKALRWIIVVGSALPLMIYVLWMLASQGV LPQQDLMASQSLNGFIGSLSRMLENPMIANAVSIFADLALATSFLGVSLGLFDFIGDLLKRSTKASHRVQVGLVTFLPPL GFALFYPQGFITALGYAAFALVILAVFLPVAMVSAQRKQAGLQGYRVKGGNLGLIAATLAGVLIISVQLMQIFNLLPAVG
Sequences:
>Translated_400_residues MNKSKIFGSMLIIAGTTIGAGMLALPLAASGLGFGMASIIMLLIWSLMTYTALLMIEVHQHAPVDATLHTLAHKLLGRKG QVIASFAMMFLFYALCAAYIAGGGEQIHSKLTNWFGLELPMQAGAIIFTLLIGTVVAIGTRSVDMINRSLFSLKLIALVV MLFLLLPHVSVENLVALPVHQGLVFASLPVIFTSFGFHGSIPSVVRYLGKDTKALRWIIVVGSALPLMIYVLWMLASQGV LPQQDLMASQSLNGFIGSLSRMLENPMIANAVSIFADLALATSFLGVSLGLFDFIGDLLKRSTKASHRVQVGLVTFLPPL GFALFYPQGFITALGYAAFALVILAVFLPVAMVSAQRKQAGLQGYRVKGGNLGLIAATLAGVLIISVQLMQIFNLLPAVG >Mature_400_residues MNKSKIFGSMLIIAGTTIGAGMLALPLAASGLGFGMASIIMLLIWSLMTYTALLMIEVHQHAPVDATLHTLAHKLLGRKG QVIASFAMMFLFYALCAAYIAGGGEQIHSKLTNWFGLELPMQAGAIIFTLLIGTVVAIGTRSVDMINRSLFSLKLIALVV MLFLLLPHVSVENLVALPVHQGLVFASLPVIFTSFGFHGSIPSVVRYLGKDTKALRWIIVVGSALPLMIYVLWMLASQGV LPQQDLMASQSLNGFIGSLSRMLENPMIANAVSIFADLALATSFLGVSLGLFDFIGDLLKRSTKASHRVQVGLVTFLPPL GFALFYPQGFITALGYAAFALVILAVFLPVAMVSAQRKQAGLQGYRVKGGNLGLIAATLAGVLIISVQLMQIFNLLPAVG
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=402, Percent_Identity=50.9950248756219, Blast_Score=397, Evalue=1e-112, Organism=Escherichia coli, GI1790145, Length=409, Percent_Identity=31.2958435207824, Blast_Score=200, Evalue=1e-52, Organism=Escherichia coli, GI1789552, Length=384, Percent_Identity=30.46875, Blast_Score=191, Evalue=5e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 42661; Mature: 42661
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: PS00589 PTS_HPR_SER ; PS00594 AROMATIC_AA_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSKIFGSMLIIAGTTIGAGMLALPLAASGLGFGMASIIMLLIWSLMTYTALLMIEVHQ CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC HAPVDATLHTLAHKLLGRKGQVIASFAMMFLFYALCAAYIAGGGEQIHSKLTNWFGLELP CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC MQAGAIIFTLLIGTVVAIGTRSVDMINRSLFSLKLIALVVMLFLLLPHVSVENLVALPVH HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QGLVFASLPVIFTSFGFHGSIPSVVRYLGKDTKALRWIIVVGSALPLMIYVLWMLASQGV HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPQQDLMASQSLNGFIGSLSRMLENPMIANAVSIFADLALATSFLGVSLGLFDFIGDLLK CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSTKASHRVQVGLVTFLPPLGFALFYPQGFITALGYAAFALVILAVFLPVAMVSAQRKQA HHHCHHHHEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLQGYRVKGGNLGLIAATLAGVLIISVQLMQIFNLLPAVG CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKSKIFGSMLIIAGTTIGAGMLALPLAASGLGFGMASIIMLLIWSLMTYTALLMIEVHQ CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC HAPVDATLHTLAHKLLGRKGQVIASFAMMFLFYALCAAYIAGGGEQIHSKLTNWFGLELP CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC MQAGAIIFTLLIGTVVAIGTRSVDMINRSLFSLKLIALVVMLFLLLPHVSVENLVALPVH HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QGLVFASLPVIFTSFGFHGSIPSVVRYLGKDTKALRWIIVVGSALPLMIYVLWMLASQGV HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPQQDLMASQSLNGFIGSLSRMLENPMIANAVSIFADLALATSFLGVSLGLFDFIGDLLK CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSTKASHRVQVGLVTFLPPLGFALFYPQGFITALGYAAFALVILAVFLPVAMVSAQRKQA HHHCHHHHEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLQGYRVKGGNLGLIAATLAGVLIISVQLMQIFNLLPAVG CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]