Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622502

Identifier: 167622502

GI number: 167622502

Start: 676135

End: 676587

Strand: Direct

Name: 167622502

Synonym: Shal_0562

Alternate gene names: NA

Gene position: 676135-676587 (Clockwise)

Preceding gene: 167622501

Following gene: 167622503

Centisome position: 12.94

GC content: 34.22

Gene sequence:

>453_bases
ATGCGCAAAATTCTAGTTTTATTTATGTTATTTAGTCTTAATAGTTTTGCGTTCGAAAATGACCAATGGAAAATAAATGG
TAAGTGGGATTGCTCACCTGAGGCAAATGGTGAAATGGCACTCATTAGTATTGTCGAATATCGTACTCAAGACATGAGCT
TCACGCATAATGGCAAGGTTACTTTTATACAAAAAGATGGAGTCGAATCTATTTTAGAATCTACCACCGTAGGTACTTTT
CAATTAGAGTATCTTACAGTTAAAGAGCAGATAGACTCAATAGAAATAGCAATAATTAAAGATGAGACAGGTTTTCTTAC
GGGTGCCGAAGAAAGCCTGAGAAAAGCTATGTTAGCTGACACAGCGTCAACTATTACTAAGTCTATAAATGAAAATCGTT
GGGTTCAAATTAATAGTGAAACCAACGAAATTACGGTGTGTAAAAAAATATAA

Upstream 100 bases:

>100_bases
GAACATTATCAAGACGCACTGATAATATTTAAAAATGCAGCAGCGATAACAATGTTAGCGCTGCTGCTGTTTAATAAGAC
GTTATATTTCGAGGAAACGT

Downstream 100 bases:

>100_bases
CAAGCTGTTAAATCAGGACAAAATACTGTTGCTGTTTTTCGTTCCTCAACAATTTTAGCCCATTAAATTTTGCCCATTAA
CGAGGGCGTTATGCGTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRKILVLFMLFSLNSFAFENDQWKINGKWDCSPEANGEMALISIVEYRTQDMSFTHNGKVTFIQKDGVESILESTTVGTF
QLEYLTVKEQIDSIEIAIIKDETGFLTGAEESLRKAMLADTASTITKSINENRWVQINSETNEITVCKKI

Sequences:

>Translated_150_residues
MRKILVLFMLFSLNSFAFENDQWKINGKWDCSPEANGEMALISIVEYRTQDMSFTHNGKVTFIQKDGVESILESTTVGTF
QLEYLTVKEQIDSIEIAIIKDETGFLTGAEESLRKAMLADTASTITKSINENRWVQINSETNEITVCKKI
>Mature_150_residues
MRKILVLFMLFSLNSFAFENDQWKINGKWDCSPEANGEMALISIVEYRTQDMSFTHNGKVTFIQKDGVESILESTTVGTF
QLEYLTVKEQIDSIEIAIIKDETGFLTGAEESLRKAMLADTASTITKSINENRWVQINSETNEITVCKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17027; Mature: 17027

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILVLFMLFSLNSFAFENDQWKINGKWDCSPEANGEMALISIVEYRTQDMSFTHNGKV
CHHHHHHHHHHHCCCCEEECCEEEECCEEECCCCCCCCEEEEEEEECCCCCCCEEECCEE
TFIQKDGVESILESTTVGTFQLEYLTVKEQIDSIEIAIIKDETGFLTGAEESLRKAMLAD
EEEECCCHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEEECCCCCEECCHHHHHHHHHHH
TASTITKSINENRWVQINSETNEITVCKKI
HHHHHHHHCCCCEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MRKILVLFMLFSLNSFAFENDQWKINGKWDCSPEANGEMALISIVEYRTQDMSFTHNGKV
CHHHHHHHHHHHCCCCEEECCEEEECCEEECCCCCCCCEEEEEEEECCCCCCCEEECCEE
TFIQKDGVESILESTTVGTFQLEYLTVKEQIDSIEIAIIKDETGFLTGAEESLRKAMLAD
EEEECCCHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEEECCCCCEECCHHHHHHHHHHH
TASTITKSINENRWVQINSETNEITVCKKI
HHHHHHHHCCCCEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA