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The map label for this gene is 167622501

Identifier: 167622501

GI number: 167622501

Start: 674084

End: 675367

Strand: Direct

Name: 167622501

Synonym: Shal_0561

Alternate gene names: NA

Gene position: 674084-675367 (Clockwise)

Preceding gene: 167622500

Following gene: 167622502

Centisome position: 12.9

GC content: 47.12

Gene sequence:

>1284_bases
GTGTTAAAAATCACTCCTTATTTGGAGTTAGATACAGAAGCTCACCAGTTAGTTGATCATGTGAGTGGTAAGAAGGTCAT
TTTAACCTTCTCCGAGTCAGCAGTGCTGCATCGTCTTCTGCTCTCCTCCAAGCCAGTTTGCTCTAAAGAGGAGCTGCTTA
GTGCTGGATGGCCCGATCGCGTCGTTGCCGTAACTTCGTTAACTCAATGTATTAGTACCTTGCGTAAAAAGCTCGACGCT
TATCGTGAGGTACAACTGAAAACCATCGCCCGTCGTGGTTATCAGTTACACATCTCGACCCAATCCCATGTGAAGATGTT
AGCGGTCAATGACGCCGAATCGATGCGCGCCGCGATTTTCGACGTTTCACTCATAGTTAAAATTTCCGGCATCGTTATCG
CCCTATTGTTGCTAGTACTTGCTTGGTATTTTAGTGATAGTCACAAGGCCAAGCAGAACTTGGCTCGCTGGAGTGCCGAT
GAGCAATTCGATCTGCAAGTGGGTGGATTAAAGGGCAATGCTCAGCTGCTCTATAAAGATGACGCGCCGCATCTGCATCC
GTTTATGTGGGAGAAACACCTGCTTCCAGATAACAGCTTCTTAACCTGCCATGAAGATTTCAATGCCTATGTTGCCACAG
ATGGCGAAAATTATTCGATGGCTATCTGCCCCGGTAGTGATAAAGAGCAGTGTGCGGGTAAGGGGTTAATTAACCTAACC
TCGGTGGACTCAGAGCCAGCACAGCTGAATTTGGAGGAGTTTGTCGATCTCTCCAGTGCCATGGAGCAACGCATCCGCTA
CAACCGCGTGATGCTGCCTGAAAGTACCGATACCAGTGGTGCGCTGCTTGAGCATAACTATCAGGCCGATGTGTATTTTC
CGGTGAAAGATGAGCTACTGATCCGCGCCGATATTAACATGTCACTGATCTATGACTCGTCAGATAGCGGTGAATTCCAC
TCCTCGACCTGCATCACCGACCAAGACTGTTTAACCACACCGATTAAGTACAAGGTGCGAGGTAAGTTTAAACAGTATTC
CGGCATGATTGATGGCCTTAAGGCCGATATCTTCCAGGTGAAAGTCGAGCAGAAAGACTTGATCCGCCCCGATAAATTGA
ATGGCTCAGCGGTGCGTTTTTATCGCGATTTACGCAAGCGTAATATTAAAGATGAAGAGCTGTATTACATTCGAATTCAT
CAAGATCACAAGACGGCGGTTTGGGTCATTCCGTTGTTTGGCCAAGTTACGGCTTGGTACCATTATGAGAGATTCGATAT
TTAG

Upstream 100 bases:

>100_bases
CGGCCATTTTGAGCCAATAATCACATTCTACTTAAGCACTTAGTTGTAGAATTCTCACATTCAGGCATCAGTTGCGCATA
ATAAGTAGTCGAGGTTAGTT

Downstream 100 bases:

>100_bases
GTCGATATCAGGGCTCATATCGAGCAGAGCTGTTTGGTTAGACTGCGTCTAACGATTAGCATCATGGGACTGCGTCCCTC
TTTGGAAGCCCACGGTTATG

Product: transcriptional regulator CadC

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MLKITPYLELDTEAHQLVDHVSGKKVILTFSESAVLHRLLLSSKPVCSKEELLSAGWPDRVVAVTSLTQCISTLRKKLDA
YREVQLKTIARRGYQLHISTQSHVKMLAVNDAESMRAAIFDVSLIVKISGIVIALLLLVLAWYFSDSHKAKQNLARWSAD
EQFDLQVGGLKGNAQLLYKDDAPHLHPFMWEKHLLPDNSFLTCHEDFNAYVATDGENYSMAICPGSDKEQCAGKGLINLT
SVDSEPAQLNLEEFVDLSSAMEQRIRYNRVMLPESTDTSGALLEHNYQADVYFPVKDELLIRADINMSLIYDSSDSGEFH
SSTCITDQDCLTTPIKYKVRGKFKQYSGMIDGLKADIFQVKVEQKDLIRPDKLNGSAVRFYRDLRKRNIKDEELYYIRIH
QDHKTAVWVIPLFGQVTAWYHYERFDI

Sequences:

>Translated_427_residues
MLKITPYLELDTEAHQLVDHVSGKKVILTFSESAVLHRLLLSSKPVCSKEELLSAGWPDRVVAVTSLTQCISTLRKKLDA
YREVQLKTIARRGYQLHISTQSHVKMLAVNDAESMRAAIFDVSLIVKISGIVIALLLLVLAWYFSDSHKAKQNLARWSAD
EQFDLQVGGLKGNAQLLYKDDAPHLHPFMWEKHLLPDNSFLTCHEDFNAYVATDGENYSMAICPGSDKEQCAGKGLINLT
SVDSEPAQLNLEEFVDLSSAMEQRIRYNRVMLPESTDTSGALLEHNYQADVYFPVKDELLIRADINMSLIYDSSDSGEFH
SSTCITDQDCLTTPIKYKVRGKFKQYSGMIDGLKADIFQVKVEQKDLIRPDKLNGSAVRFYRDLRKRNIKDEELYYIRIH
QDHKTAVWVIPLFGQVTAWYHYERFDI
>Mature_427_residues
MLKITPYLELDTEAHQLVDHVSGKKVILTFSESAVLHRLLLSSKPVCSKEELLSAGWPDRVVAVTSLTQCISTLRKKLDA
YREVQLKTIARRGYQLHISTQSHVKMLAVNDAESMRAAIFDVSLIVKISGIVIALLLLVLAWYFSDSHKAKQNLARWSAD
EQFDLQVGGLKGNAQLLYKDDAPHLHPFMWEKHLLPDNSFLTCHEDFNAYVATDGENYSMAICPGSDKEQCAGKGLINLT
SVDSEPAQLNLEEFVDLSSAMEQRIRYNRVMLPESTDTSGALLEHNYQADVYFPVKDELLIRADINMSLIYDSSDSGEFH
SSTCITDQDCLTTPIKYKVRGKFKQYSGMIDGLKADIFQVKVEQKDLIRPDKLNGSAVRFYRDLRKRNIKDEELYYIRIH
QDHKTAVWVIPLFGQVTAWYHYERFDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48674; Mature: 48674

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKITPYLELDTEAHQLVDHVSGKKVILTFSESAVLHRLLLSSKPVCSKEELLSAGWPDR
CEEECCEEEECCHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHCCCCCH
VVAVTSLTQCISTLRKKLDAYREVQLKTIARRGYQLHISTQSHVKMLAVNDAESMRAAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCHHHHHHHHH
DVSLIVKISGIVIALLLLVLAWYFSDSHKAKQNLARWSADEQFDLQVGGLKGNAQLLYKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEC
DAPHLHPFMWEKHLLPDNSFLTCHEDFNAYVATDGENYSMAICPGSDKEQCAGKGLINLT
CCCCCCCHHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCHHHHCCCCCEEEE
SVDSEPAQLNLEEFVDLSSAMEQRIRYNRVMLPESTDTSGALLEHNYQADVYFPVKDELL
ECCCCCCEECHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEECCCCEEEEECCCCCEE
IRADINMSLIYDSSDSGEFHSSTCITDQDCLTTPIKYKVRGKFKQYSGMIDGLKADIFQV
EEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCHHCCCCCEEEEE
KVEQKDLIRPDKLNGSAVRFYRDLRKRNIKDEELYYIRIHQDHKTAVWVIPLFGQVTAWY
EECHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEE
HYERFDI
EEEECCC
>Mature Secondary Structure
MLKITPYLELDTEAHQLVDHVSGKKVILTFSESAVLHRLLLSSKPVCSKEELLSAGWPDR
CEEECCEEEECCHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHCCCCCH
VVAVTSLTQCISTLRKKLDAYREVQLKTIARRGYQLHISTQSHVKMLAVNDAESMRAAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCHHHHHHHHH
DVSLIVKISGIVIALLLLVLAWYFSDSHKAKQNLARWSADEQFDLQVGGLKGNAQLLYKD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEC
DAPHLHPFMWEKHLLPDNSFLTCHEDFNAYVATDGENYSMAICPGSDKEQCAGKGLINLT
CCCCCCCHHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCHHHHCCCCCEEEE
SVDSEPAQLNLEEFVDLSSAMEQRIRYNRVMLPESTDTSGALLEHNYQADVYFPVKDELL
ECCCCCCEECHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEECCCCEEEEECCCCCEE
IRADINMSLIYDSSDSGEFHSSTCITDQDCLTTPIKYKVRGKFKQYSGMIDGLKADIFQV
EEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCHHCCCCCEEEEE
KVEQKDLIRPDKLNGSAVRFYRDLRKRNIKDEELYYIRIHQDHKTAVWVIPLFGQVTAWY
EECHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEE
HYERFDI
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA