Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622458

Identifier: 167622458

GI number: 167622458

Start: 625443

End: 625997

Strand: Reverse

Name: 167622458

Synonym: Shal_0518

Alternate gene names: NA

Gene position: 625997-625443 (Counterclockwise)

Preceding gene: 167622459

Following gene: 167622455

Centisome position: 11.98

GC content: 38.2

Gene sequence:

>555_bases
ATGTTATGGCACTGGGCACATAGGTCACGCAAAAACTGCGACCAGTGGTGGGAAAACGAAACTGAATGGCACCGTTCATG
GAAAGATTTATTTCCTGATGATTGGCAAGAAGTAGCAGAAAAAGATCCCTATACGGGAGAAATTCATGTCGCAGACATAA
AAACTCCTAATGGTTTGGTAATCGAGTTTCAACATTCCACGATCAACTCTGATGAACTTATCTCAAGAGAGTTATTTTAT
AAAAAGATGATATGGGTTGTAGATGGATGCAAAAATGAATTTGATATGTACAACTTCAGTAATATGCGAAGTCGTCCAGA
TGCTGAAGGTATTGCTAATTTTCATTGGTTTGGGAGAAGCACGCTCTTTAAACGCTGGTATTCGAGAAAGCCTATATTTA
TTGATTTTGGACCTAAAGGATTCTGGAGAGTTCTTCGGTTTGATTTGAAAACAAAGAAAGGGTTAGTAGGTATTGTTGAT
AAGAGTGATTTTGCAAGCCTCATTATTAAAGATACAACAGATTTTAGCGATTGTGGGGGACCGGCTTCAAACTAA

Upstream 100 bases:

>100_bases
ATTTGCTTTGATAAACGGAGAGCGTGTTACACCCGCACCAAAAGCCAGGGGAATCTGCCCTGTATGCAAATCTGAGTTAA
TCTCAAAGTGTGGTGAGTAC

Downstream 100 bases:

>100_bases
ACACTGCGGTGAATGGACGATGGAAGTGTCTACTGTTCTAGGGACTTACCATTCGGTGGGTAACTAACCGCTTACGTTTT
AGCTGCTTAATTAGCCTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Competence Protein-Like; Myosin N-Terminal SH3 Domain Protein; Myosin N-Terminal SH3-Like Domain-Containing Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLWHWAHRSRKNCDQWWENETEWHRSWKDLFPDDWQEVAEKDPYTGEIHVADIKTPNGLVIEFQHSTINSDELISRELFY
KKMIWVVDGCKNEFDMYNFSNMRSRPDAEGIANFHWFGRSTLFKRWYSRKPIFIDFGPKGFWRVLRFDLKTKKGLVGIVD
KSDFASLIIKDTTDFSDCGGPASN

Sequences:

>Translated_184_residues
MLWHWAHRSRKNCDQWWENETEWHRSWKDLFPDDWQEVAEKDPYTGEIHVADIKTPNGLVIEFQHSTINSDELISRELFY
KKMIWVVDGCKNEFDMYNFSNMRSRPDAEGIANFHWFGRSTLFKRWYSRKPIFIDFGPKGFWRVLRFDLKTKKGLVGIVD
KSDFASLIIKDTTDFSDCGGPASN
>Mature_184_residues
MLWHWAHRSRKNCDQWWENETEWHRSWKDLFPDDWQEVAEKDPYTGEIHVADIKTPNGLVIEFQHSTINSDELISRELFY
KKMIWVVDGCKNEFDMYNFSNMRSRPDAEGIANFHWFGRSTLFKRWYSRKPIFIDFGPKGFWRVLRFDLKTKKGLVGIVD
KSDFASLIIKDTTDFSDCGGPASN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21894; Mature: 21894

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWHWAHRSRKNCDQWWENETEWHRSWKDLFPDDWQEVAEKDPYTGEIHVADIKTPNGLV
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCEE
IEFQHSTINSDELISRELFYKKMIWVVDGCKNEFDMYNFSNMRSRPDAEGIANFHWFGRS
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHH
TLFKRWYSRKPIFIDFGPKGFWRVLRFDLKTKKGLVGIVDKSDFASLIIKDTTDFSDCGG
HHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCC
PASN
CCCC
>Mature Secondary Structure
MLWHWAHRSRKNCDQWWENETEWHRSWKDLFPDDWQEVAEKDPYTGEIHVADIKTPNGLV
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCEE
IEFQHSTINSDELISRELFYKKMIWVVDGCKNEFDMYNFSNMRSRPDAEGIANFHWFGRS
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHH
TLFKRWYSRKPIFIDFGPKGFWRVLRFDLKTKKGLVGIVDKSDFASLIIKDTTDFSDCGG
HHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCC
PASN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA