Click here to switch to the map view.

The map label for this gene is yeeN [C]

Identifier: 167622442

GI number: 167622442

Start: 604869

End: 605597

Strand: Reverse

Name: yeeN [C]

Synonym: Shal_0502

Alternate gene names: 167622442

Gene position: 605597-604869 (Counterclockwise)

Preceding gene: 167622444

Following gene: 167622428

Centisome position: 11.59

GC content: 45.95

Gene sequence:

>729_bases
ATGGGCAGAGCATACCAAAACAAAAAAGAATCCATGGCGAAAACCGCTGGGCAAAAAACCAGAATCTATTCTCGATATGG
GAAGGAACTGTACGTTTGCGCCAAGAATGGTGGTTTTGATCCTGACGGCAACCTTGCACTTCGCACCATGATCGCCAAGG
CAAAGAAAGACCAAGTACCTGCACACGTTATTGAACGCGCAATCGAAAAAGCTCGTGGCGGTGGTGGTGAAGACTACGAA
ACAGCACGTTATGAAGGCTTTGGTCCTGGCGGTTGCATGGTAATTGCCGACTGCTTAACTGATAACGTTAAGCGAACTTT
CACCGAAGTTCGCCAAGCATTCGTTAAAAACGATGCCAAGCTAGGCGGTCCTGGTACTGTTGGCCACATGTTCGATCATC
AAGCGGTATTCGTATTCGCTGGCGATGACGAAGATGCGATTCTTGAAATGCTAATGATGGCTGACGTTGATGTAACTGAC
GTTGAACTAGAAGATGGCATGATAAGCGTTTATGCACCGCACACTGAATTCTTCAAGGTTAAAACAGCATTAGCCGCTGA
ACTACCAGAAGATACTGACTACGTTATGGAAGAGATTACTTTCTTACCACAGACAATGACAGCCATTACTGATGCGGAAG
AGATTGAGCAGTTCGAAAAATTCCTAGCCGCACTAGAAGATTGTGATGACGTGCAAAACGTTTACCACAACGCAGAGCTT
CCACAGTAA

Upstream 100 bases:

>100_bases
AATGGCTAGGATTAGTATTTTTAAAGGTCTGCACCTGATTTGTTTCGATAAATCTGCTAACATTGCTGCCAATTTTTTAA
GCTTAGTGAGAAAGATCAAG

Downstream 100 bases:

>100_bases
GAGTTACTACTATTAACGCTTACCTCTACTGACTCGCGAAACGCGAGTCAGCAAAAAGGCACTCAATGAGTGCCTTTTTT
ATTGTCTGCGATTTGCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MGRAYQNKKESMAKTAGQKTRIYSRYGKELYVCAKNGGFDPDGNLALRTMIAKAKKDQVPAHVIERAIEKARGGGGEDYE
TARYEGFGPGGCMVIADCLTDNVKRTFTEVRQAFVKNDAKLGGPGTVGHMFDHQAVFVFAGDDEDAILEMLMMADVDVTD
VELEDGMISVYAPHTEFFKVKTALAAELPEDTDYVMEEITFLPQTMTAITDAEEIEQFEKFLAALEDCDDVQNVYHNAEL
PQ

Sequences:

>Translated_242_residues
MGRAYQNKKESMAKTAGQKTRIYSRYGKELYVCAKNGGFDPDGNLALRTMIAKAKKDQVPAHVIERAIEKARGGGGEDYE
TARYEGFGPGGCMVIADCLTDNVKRTFTEVRQAFVKNDAKLGGPGTVGHMFDHQAVFVFAGDDEDAILEMLMMADVDVTD
VELEDGMISVYAPHTEFFKVKTALAAELPEDTDYVMEEITFLPQTMTAITDAEEIEQFEKFLAALEDCDDVQNVYHNAEL
PQ
>Mature_241_residues
GRAYQNKKESMAKTAGQKTRIYSRYGKELYVCAKNGGFDPDGNLALRTMIAKAKKDQVPAHVIERAIEKARGGGGEDYET
ARYEGFGPGGCMVIADCLTDNVKRTFTEVRQAFVKNDAKLGGPGTVGHMFDHQAVFVFAGDDEDAILEMLMMADVDVTDV
ELEDGMISVYAPHTEFFKVKTALAAELPEDTDYVMEEITFLPQTMTAITDAEEIEQFEKFLAALEDCDDVQNVYHNAELP
Q

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=236, Percent_Identity=25.8474576271186, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=43.8818565400844, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1788171, Length=241, Percent_Identity=39.4190871369295, Blast_Score=156, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=29.277566539924, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26805; Mature: 26674

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAYQNKKESMAKTAGQKTRIYSRYGKELYVCAKNGGFDPDGNLALRTMIAKAKKDQVP
CCCCHHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
AHVIERAIEKARGGGGEDYETARYEGFGPGGCMVIADCLTDNVKRTFTEVRQAFVKNDAK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCC
LGGPGTVGHMFDHQAVFVFAGDDEDAILEMLMMADVDVTDVELEDGMISVYAPHTEFFKV
CCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHH
KTALAAELPEDTDYVMEEITFLPQTMTAITDAEEIEQFEKFLAALEDCDDVQNVYHNAEL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PQ
CC
>Mature Secondary Structure 
GRAYQNKKESMAKTAGQKTRIYSRYGKELYVCAKNGGFDPDGNLALRTMIAKAKKDQVP
CCCHHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
AHVIERAIEKARGGGGEDYETARYEGFGPGGCMVIADCLTDNVKRTFTEVRQAFVKNDAK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCC
LGGPGTVGHMFDHQAVFVFAGDDEDAILEMLMMADVDVTDVELEDGMISVYAPHTEFFKV
CCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHH
KTALAAELPEDTDYVMEEITFLPQTMTAITDAEEIEQFEKFLAALEDCDDVQNVYHNAEL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]