| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622426
Identifier: 167622426
GI number: 167622426
Start: 585409
End: 585627
Strand: Reverse
Name: 167622426
Synonym: Shal_0486
Alternate gene names: NA
Gene position: 585627-585409 (Counterclockwise)
Preceding gene: 167622427
Following gene: 167622423
Centisome position: 11.2
GC content: 46.12
Gene sequence:
>219_bases ATGAAATATTCCATTGGCGATCTTATCTATCAAGGTGAAACATCTGGCGTTCACAACTGGGACACTCTTTCAGGGTCATC TTTTTACTGGCACCCAGACTGGCTGCATATTGCAGAAAATATGACTGGCCACAACGCTACGGCTCACATTGAGGCCAGTG CAGAGAAAGCAACCAAAGCCGAAGCGACTGAGGCGATTGTTAAGCATCTCAATAAGTAG
Upstream 100 bases:
>100_bases CGCATTCTAAATAGATCAGCAATTGAACTCATAAAGTGCGAAGTGAGTGATTTACGCTACAAGATTTCAAAGAATTAAAC TTAAACATCAGGGGTTAACT
Downstream 100 bases:
>100_bases CCATAACTTGTTCAGAGACGGTTTCACTTTGATAGGAGTCTAATGCTTGAGGTCGGCCTATACCGTATCCTTGAGCATAA TTAACTCCTATGACTTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MKYSIGDLIYQGETSGVHNWDTLSGSSFYWHPDWLHIAENMTGHNATAHIEASAEKATKAEATEAIVKHLNK
Sequences:
>Translated_72_residues MKYSIGDLIYQGETSGVHNWDTLSGSSFYWHPDWLHIAENMTGHNATAHIEASAEKATKAEATEAIVKHLNK >Mature_72_residues MKYSIGDLIYQGETSGVHNWDTLSGSSFYWHPDWLHIAENMTGHNATAHIEASAEKATKAEATEAIVKHLNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8012; Mature: 8012
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSIGDLIYQGETSGVHNWDTLSGSSFYWHPDWLHIAENMTGHNATAHIEASAEKATKA CCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCHHEECCCCCCCCCEEEEECCCCHHHHH EATEAIVKHLNK HHHHHHHHHHCC >Mature Secondary Structure MKYSIGDLIYQGETSGVHNWDTLSGSSFYWHPDWLHIAENMTGHNATAHIEASAEKATKA CCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCHHEECCCCCCCCCEEEEECCCCHHHHH EATEAIVKHLNK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA