Click here to switch to the map view.

The map label for this gene is 167622341

Identifier: 167622341

GI number: 167622341

Start: 469485

End: 470939

Strand: Reverse

Name: 167622341

Synonym: Shal_0401

Alternate gene names: NA

Gene position: 470939-469485 (Counterclockwise)

Preceding gene: 167622342

Following gene: 167622337

Centisome position: 9.01

GC content: 43.85

Gene sequence:

>1455_bases
ATGGAACACAGTCTCAGTGATCTCGTTATTCATTTATTCTCTACGTTTGGAAATATGGTTTGGCAAATATACTGGCCTCT
GGTATTTGGCCTGATATTATCATCTTGGATACGTAATATTATACCGGTATCCAGTGTGGTTAAGCACCTAGGTAAAACCA
GCCTGACCAGCTTAGCCTTAACGACCGTTCTCGGTATGGTGTCATCTTCATGCTCCTATGCCGCCGCTTCACTTTCTCAT
ACCTTACTGGAAAAAAAATCAACAGTAGCCAATGCGATGGCTTTTTTAGTTTCCAGCACCAACTTAATTTTAGAGATGTT
TATTGTATTAGTGGCCTTAATGGGCTGGACCTTTTTATGGGGAGAGATACTCGGCGGACTGATATTAATTGTTACCGTTG
GCTTTCTATTTCATCGCTTCTACCCTAAAGATGTTGAACAAGAACTACGTCAACATTTCAATGCTAGTCAACAAGCTACT
GCCAACACCGCCATGGATATGTCCAAAATGAAAGAAGGAAGCCGCGGTGCCGACATGGATATGTCCAAAATGAAAGAAGG
TAGCTGCGGTGCTGACATGGATATGTCCAAAATGAAAGAAAGTAGCCGCGGTGCTGACATGGATATGTCCAAAATGAAAG
AAGGTAGCTGCGGTGCTGACATGGATATGTCCAAAATGAAAGAAGGTAGCTGCGGTGCTGACATGGATATGTCCAAAATG
AAAGAAGGTAGCTGCGGTGCTGACATGGATATGTCCAAAATGAAAGAAGGTAGCTGCGGTGCTGACATGGATATGTCGAA
TATGAAGGAAGGTGGTTCCGGCGCCAATATGTCAGCTCCAGAACCGGTAGCGGGCTTTATGGCAAAAGTATCTAAGTCGG
CCGGATTTTTTCACATGGATATTGCCATGATTGGCAAAGAGATCTTAATTGGCGTAGTCATCTCCTCCATTCTTATCGCT
ATTGTGCCACTCGATGGCTGGCGCAGCCTATTTATCAGCAACGATGTAGGTTTACCAATCTGGCTACACTCAGTGATCGA
TGTTCTTATTGGTATTTTTGTCGCGATGCTTGCTTATGTGTGCTCAGTGGGTAACCTGATTTTAGCCGCAGCATTGTGGC
ACGGCGGGATCTCGTTTGGCGGGGTCATAGGTTTCATCTTGTCGGATGTATTAACAATCCCGATGATCCGCGTTTATACA
AAGTACTATGGCGTTCGTCCTACCAAATGGATCGTGGGTTTACTATTTATCGCCATCTTTTTCACTGCTCTTTGTATCGA
TGCCATCTTCAATGGCTTCGGATGGATAATAGCCAGTGGCGGCGAACGTACTATTAATCAAGCAGGCTTAGGCTGGAACT
TCACCAGCATAATGAACCTGATCTTTATCCCACTCTCTATTTGGTATTACTATTTAGGCAAAAAAGCCAATGCTAACATG
CATATGAGCATGTAA

Upstream 100 bases:

>100_bases
GCTGATACAGATATAGGAGGCGAGCACAATGCTATGTTTGATATAGTAAAATGCACATCAATAGCAGTTCTTGCTAATGT
AATATACGAAGGTTTTGATT

Downstream 100 bases:

>100_bases
CCGTTAGCCTTTATTAACGATAAATCTTGGAGCGAATGTTTCTACTTAGGCAATAAGCCCATAGATGCTTCAAAGGATAA
CTTAACCAAAAACCGGCCTG

Product: permease

Products: NA

Alternate protein names: Metal Ion Permease; Integral Membrane Protein

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MEHSLSDLVIHLFSTFGNMVWQIYWPLVFGLILSSWIRNIIPVSSVVKHLGKTSLTSLALTTVLGMVSSSCSYAAASLSH
TLLEKKSTVANAMAFLVSSTNLILEMFIVLVALMGWTFLWGEILGGLILIVTVGFLFHRFYPKDVEQELRQHFNASQQAT
ANTAMDMSKMKEGSRGADMDMSKMKEGSCGADMDMSKMKESSRGADMDMSKMKEGSCGADMDMSKMKEGSCGADMDMSKM
KEGSCGADMDMSKMKEGSCGADMDMSNMKEGGSGANMSAPEPVAGFMAKVSKSAGFFHMDIAMIGKEILIGVVISSILIA
IVPLDGWRSLFISNDVGLPIWLHSVIDVLIGIFVAMLAYVCSVGNLILAAALWHGGISFGGVIGFILSDVLTIPMIRVYT
KYYGVRPTKWIVGLLFIAIFFTALCIDAIFNGFGWIIASGGERTINQAGLGWNFTSIMNLIFIPLSIWYYYLGKKANANM
HMSM

Sequences:

>Translated_484_residues
MEHSLSDLVIHLFSTFGNMVWQIYWPLVFGLILSSWIRNIIPVSSVVKHLGKTSLTSLALTTVLGMVSSSCSYAAASLSH
TLLEKKSTVANAMAFLVSSTNLILEMFIVLVALMGWTFLWGEILGGLILIVTVGFLFHRFYPKDVEQELRQHFNASQQAT
ANTAMDMSKMKEGSRGADMDMSKMKEGSCGADMDMSKMKESSRGADMDMSKMKEGSCGADMDMSKMKEGSCGADMDMSKM
KEGSCGADMDMSKMKEGSCGADMDMSNMKEGGSGANMSAPEPVAGFMAKVSKSAGFFHMDIAMIGKEILIGVVISSILIA
IVPLDGWRSLFISNDVGLPIWLHSVIDVLIGIFVAMLAYVCSVGNLILAAALWHGGISFGGVIGFILSDVLTIPMIRVYT
KYYGVRPTKWIVGLLFIAIFFTALCIDAIFNGFGWIIASGGERTINQAGLGWNFTSIMNLIFIPLSIWYYYLGKKANANM
HMSM
>Mature_484_residues
MEHSLSDLVIHLFSTFGNMVWQIYWPLVFGLILSSWIRNIIPVSSVVKHLGKTSLTSLALTTVLGMVSSSCSYAAASLSH
TLLEKKSTVANAMAFLVSSTNLILEMFIVLVALMGWTFLWGEILGGLILIVTVGFLFHRFYPKDVEQELRQHFNASQQAT
ANTAMDMSKMKEGSRGADMDMSKMKEGSCGADMDMSKMKESSRGADMDMSKMKEGSCGADMDMSKMKEGSCGADMDMSKM
KEGSCGADMDMSKMKEGSCGADMDMSNMKEGGSGANMSAPEPVAGFMAKVSKSAGFFHMDIAMIGKEILIGVVISSILIA
IVPLDGWRSLFISNDVGLPIWLHSVIDVLIGIFVAMLAYVCSVGNLILAAALWHGGISFGGVIGFILSDVLTIPMIRVYT
KYYGVRPTKWIVGLLFIAIFFTALCIDAIFNGFGWIIASGGERTINQAGLGWNFTSIMNLIFIPLSIWYYYLGKKANANM
HMSM

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52697; Mature: 52697

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00583 PFKB_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA