Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622337

Identifier: 167622337

GI number: 167622337

Start: 465034

End: 465732

Strand: Reverse

Name: 167622337

Synonym: Shal_0397

Alternate gene names: NA

Gene position: 465732-465034 (Counterclockwise)

Preceding gene: 167622341

Following gene: 167622332

Centisome position: 8.91

GC content: 45.06

Gene sequence:

>699_bases
ATGTGTGGTCGACTCAATATTATTGATGACATGTTTGTACAAACATTGATGGATGATTTGCGGATTAGCAATCAGCAAGA
GATGCTGTTTGGTCGCTTTAAAATGCCGACCAATGACATCAGTATTGTGCGTGAGATTGATGGTGAGCGCCGCTTGCAAA
CCGCCACCTGGTGGTTACTGCTTGAAACTTGCTATGAAGGCTTTAAACCCAGCCGTTACACCTCATTTAACACTCGATTC
GATAAGTTAAATACCCCCAATAGCGCAGGTTTTCAGCCATTTAGAGAGAGTCGTTGTTTAGTGATTGCCAGTGGCTTTGG
TGAAACTGAGAAAAGAGGTAAAGATACTTATTATCACGACTTTATTGCCGAGAACTCAGCGATAGCTTTTGGCGGGTTAT
TTAGAGACTGGCAGCACCCCAAAACCGGCGAAGTGACCACATCCTGTTCCATCATCACCAATCCGCCACACCCAGACCTA
CTTCCGTATCACAGCAAAGCCAGCCCGATGATCTTGCCGCAAAATGATGAAGTGATCGATGCGTGGTTAAACCCCGCTAA
CCAACAAGTTGAGATGTTTGATGACTTACTCAAGCCTGCTCTTAGGCATGACTTTATGGTGCAGCAAATAAATAAGCCGA
GTCAGCATCAACCCATTGGTCAAGCTACCCGGCTTATTCCTAACGATTACCTTGTGTAA

Upstream 100 bases:

>100_bases
GTGACACAAGAATTAACAATGGGTCCCTATTTTTATCTAGCTATACTCAGCTCAAAATCATTCATATACTCAATACAAGT
TCTGTTTACGGTGATGCGCT

Downstream 100 bases:

>100_bases
GCTGTAACTAAACACTGAATTGAGATAAGCGTTCGGTATCAGATAACAGCATGCCTAACTCACCTCAGCAACAAAACAGT
TAAGTGATTACACCGTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MCGRLNIIDDMFVQTLMDDLRISNQQEMLFGRFKMPTNDISIVREIDGERRLQTATWWLLLETCYEGFKPSRYTSFNTRF
DKLNTPNSAGFQPFRESRCLVIASGFGETEKRGKDTYYHDFIAENSAIAFGGLFRDWQHPKTGEVTTSCSIITNPPHPDL
LPYHSKASPMILPQNDEVIDAWLNPANQQVEMFDDLLKPALRHDFMVQQINKPSQHQPIGQATRLIPNDYLV

Sequences:

>Translated_232_residues
MCGRLNIIDDMFVQTLMDDLRISNQQEMLFGRFKMPTNDISIVREIDGERRLQTATWWLLLETCYEGFKPSRYTSFNTRF
DKLNTPNSAGFQPFRESRCLVIASGFGETEKRGKDTYYHDFIAENSAIAFGGLFRDWQHPKTGEVTTSCSIITNPPHPDL
LPYHSKASPMILPQNDEVIDAWLNPANQQVEMFDDLLKPALRHDFMVQQINKPSQHQPIGQATRLIPNDYLV
>Mature_232_residues
MCGRLNIIDDMFVQTLMDDLRISNQQEMLFGRFKMPTNDISIVREIDGERRLQTATWWLLLETCYEGFKPSRYTSFNTRF
DKLNTPNSAGFQPFRESRCLVIASGFGETEKRGKDTYYHDFIAENSAIAFGGLFRDWQHPKTGEVTTSCSIITNPPHPDL
LPYHSKASPMILPQNDEVIDAWLNPANQQVEMFDDLLKPALRHDFMVQQINKPSQHQPIGQATRLIPNDYLV

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26747; Mature: 26747

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRLNIIDDMFVQTLMDDLRISNQQEMLFGRFKMPTNDISIVREIDGERRLQTATWWLL
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHH
LETCYEGFKPSRYTSFNTRFDKLNTPNSAGFQPFRESRCLVIASGFGETEKRGKDTYYHD
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCHHHH
FIAENSAIAFGGLFRDWQHPKTGEVTTSCSIITNPPHPDLLPYHSKASPMILPQNDEVID
HHHCCCCEEECHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHH
AWLNPANQQVEMFDDLLKPALRHDFMVQQINKPSQHQPIGQATRLIPNDYLV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MCGRLNIIDDMFVQTLMDDLRISNQQEMLFGRFKMPTNDISIVREIDGERRLQTATWWLL
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHH
LETCYEGFKPSRYTSFNTRFDKLNTPNSAGFQPFRESRCLVIASGFGETEKRGKDTYYHD
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCHHHH
FIAENSAIAFGGLFRDWQHPKTGEVTTSCSIITNPPHPDLLPYHSKASPMILPQNDEVID
HHHCCCCEEECHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHH
AWLNPANQQVEMFDDLLKPALRHDFMVQQINKPSQHQPIGQATRLIPNDYLV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA