| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is frlD [H]
Identifier: 167622058
GI number: 167622058
Start: 133910
End: 134752
Strand: Direct
Name: frlD [H]
Synonym: Shal_0117
Alternate gene names: 167622058
Gene position: 133910-134752 (Clockwise)
Preceding gene: 167622057
Following gene: 167622059
Centisome position: 2.56
GC content: 51.72
Gene sequence:
>843_bases ATGGCGAATATATTATTGGTAGCAAACCTCAATTGTGATCGTATTTTTTTGCTTAACCATCCCATTAAAACCGGTGGTCG ATTTCATTATAAAGATGGTGGTCAGCGCTTAGGTGGCGGCGGTGCCAATACGGGTATTGGCCTCGTCTGGGCCGGGCATC AGGTATCACTGGTCACAGAGGTAGGCCGCGATGATGTGGGAGACTGGTTACTCGCCGAGGCCAGCACTCAAGGAATTAAT TGCAGCCTGATCCAGCGCCGTGCAGGTAGTACTGGTGAGATGCTGTTGATGATGACGCCGGACGGTGAGCGAACCATCAT CAGACCCGAGCGACCCAAGTTCGAACTGCCGTTGCCGCCAAACTGGCAAAATGTCGATGTCCTCTATATCAACTCTTCAA GCGAGGGGGCTGCCAGTTGGGCTAAGACTGCTATGCCGTATTGCTGGGTGGTCGCTCAGCTAGCAAAAGATCAACGGGCA CGACCCTGTCATGTACTTATTGCTTCACTGAGTGATATGCAAGGCCGCTGTGAAGGCGACCCATGGGAGTTTGCAAAATC GATATCAGGGAATGATCTAAAGTACTTTGTGGTTACCGACGGTGAAAACGGGGCGATGCTATATAGCGCAGCAGAGTCTG TACTGGTCGCGGCGGTACCCAGTCAAGTTGTAGATACCACAGGGGCGGGGGACGCCTATGCGGCTGGGCTTATTCACGCC TTAGTTAGTCAAAAAGAGATCGTCGCAGCAATGCAGGAAGCAGCCATTTGGTCTGGTTTTGCGGTGGCCTGTAATAGCTC AATTCCAGGTAAGGGTTTGAAACACTATTTAACGGCGGAGTAG
Upstream 100 bases:
>100_bases GCTCACCCTTTTTGTTTAAGCATTGGAAACTAAAGCCTGACTTGGCACCTCTGTCGAAATCTCTTACTATCAAGTTAATA GTCATTCTTATCGAGCTGTC
Downstream 100 bases:
>100_bases CGGTGCTATTGGAGCTGTCTCATATTTGTATTGCTCCGCTCTACTGCTCAGCAAGCTGACCGAAAACCCCCATTTTATAA CTCTAATGCCCTGTTGTTCC
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTEVGRDDVGDWLLAEASTQGIN CSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPPNWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRA RPCHVLIASLSDMQGRCEGDPWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE
Sequences:
>Translated_280_residues MANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTEVGRDDVGDWLLAEASTQGIN CSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPPNWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRA RPCHVLIASLSDMQGRCEGDPWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE >Mature_279_residues ANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTEVGRDDVGDWLLAEASTQGINC SLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPPNWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRAR PCHVLIASLSDMQGRCEGDPWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHAL VSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE
Specific function: Catalyzes the phosphorylation of a range of fructosamines to fructosamine 6-phosphates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 29946; Mature: 29815
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTE CCEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEC VGRDDVGDWLLAEASTQGINCSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPP CCCCCCCCEEEEECCCCCCCEEEEHHCCCCCCCEEEEECCCCCEEEECCCCCCEECCCCC NWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRARPCHVLIASLSDMQGRCEGD CCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCC PWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA HHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCHHHHCCCCCCHHHHHHHHHH LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCC >Mature Secondary Structure ANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTE CEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEC VGRDDVGDWLLAEASTQGINCSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPP CCCCCCCCEEEEECCCCCCCEEEEHHCCCCCCCEEEEECCCCCEEEECCCCCCEECCCCC NWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRARPCHVLIASLSDMQGRCEGD CCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCC PWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA HHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCHHHHCCCCCCHHHHHHHHHH LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]