Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622034

Identifier: 167622034

GI number: 167622034

Start: 104681

End: 104983

Strand: Direct

Name: 167622034

Synonym: Shal_0093

Alternate gene names: NA

Gene position: 104681-104983 (Clockwise)

Preceding gene: 167622033

Following gene: 167622035

Centisome position: 2.0

GC content: 41.91

Gene sequence:

>303_bases
ATGAAAGTTTCTCTCCTAGTCGTTATTTTTCTGAGTATTGTCTTTGTGTCGGCTTGTAATAGCCGCTCTCAAGAAATAGA
TCAGCAGTCTATTATCACTGACTCACACAGTGATCTTCCTCGTAAGCATCTCTTATGCAGTTCAACGCCCCCGATCCTAG
ATACGACTAAGCTTAAGGCTAACCTTAAAGAGCGAGGTTTAATCACCGAACAGATGACTGAAGCCGAAGCTGAGCAAATT
GTTGTTGAATATATTCGCAAGCGTCAGAAAGCGTTCCAAGACTGTAAAAAAGGAAGTCAGTAG

Upstream 100 bases:

>100_bases
TACTGCCATTTTAAAATAGGCTGCCTAAATATATTAATTGGACTGTTAATGTATTGCTGTTGTTGTTATTGTTTTGTGAT
TCAGCAGTATTGGGTGGCCT

Downstream 100 bases:

>100_bases
TATGAATAAACTTCTTAAAATTAAATTGTTAGCGGCATTTTTTGCAGCAATAATTTCATTCTCTCCTATTGCTCTCGCAG
TACCTGTGACATCTGGTACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKANLKERGLITEQMTEAEAEQI
VVEYIRKRQKAFQDCKKGSQ

Sequences:

>Translated_100_residues
MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKANLKERGLITEQMTEAEAEQI
VVEYIRKRQKAFQDCKKGSQ
>Mature_100_residues
MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKANLKERGLITEQMTEAEAEQI
VVEYIRKRQKAFQDCKKGSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11305; Mature: 11305

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKA
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHH
NLKERGLITEQMTEAEAEQIVVEYIRKRQKAFQDCKKGSQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKA
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHH
NLKERGLITEQMTEAEAEQIVVEYIRKRQKAFQDCKKGSQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA