| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622034
Identifier: 167622034
GI number: 167622034
Start: 104681
End: 104983
Strand: Direct
Name: 167622034
Synonym: Shal_0093
Alternate gene names: NA
Gene position: 104681-104983 (Clockwise)
Preceding gene: 167622033
Following gene: 167622035
Centisome position: 2.0
GC content: 41.91
Gene sequence:
>303_bases ATGAAAGTTTCTCTCCTAGTCGTTATTTTTCTGAGTATTGTCTTTGTGTCGGCTTGTAATAGCCGCTCTCAAGAAATAGA TCAGCAGTCTATTATCACTGACTCACACAGTGATCTTCCTCGTAAGCATCTCTTATGCAGTTCAACGCCCCCGATCCTAG ATACGACTAAGCTTAAGGCTAACCTTAAAGAGCGAGGTTTAATCACCGAACAGATGACTGAAGCCGAAGCTGAGCAAATT GTTGTTGAATATATTCGCAAGCGTCAGAAAGCGTTCCAAGACTGTAAAAAAGGAAGTCAGTAG
Upstream 100 bases:
>100_bases TACTGCCATTTTAAAATAGGCTGCCTAAATATATTAATTGGACTGTTAATGTATTGCTGTTGTTGTTATTGTTTTGTGAT TCAGCAGTATTGGGTGGCCT
Downstream 100 bases:
>100_bases TATGAATAAACTTCTTAAAATTAAATTGTTAGCGGCATTTTTTGCAGCAATAATTTCATTCTCTCCTATTGCTCTCGCAG TACCTGTGACATCTGGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKANLKERGLITEQMTEAEAEQI VVEYIRKRQKAFQDCKKGSQ
Sequences:
>Translated_100_residues MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKANLKERGLITEQMTEAEAEQI VVEYIRKRQKAFQDCKKGSQ >Mature_100_residues MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKANLKERGLITEQMTEAEAEQI VVEYIRKRQKAFQDCKKGSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11305; Mature: 11305
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKA CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHH NLKERGLITEQMTEAEAEQIVVEYIRKRQKAFQDCKKGSQ HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVSLLVVIFLSIVFVSACNSRSQEIDQQSIITDSHSDLPRKHLLCSSTPPILDTTKLKA CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHH NLKERGLITEQMTEAEAEQIVVEYIRKRQKAFQDCKKGSQ HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA