| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is oxaA [H]
Identifier: 167041021
GI number: 167041021
Start: 2455578
End: 2456198
Strand: Reverse
Name: oxaA [H]
Synonym: Teth514_2411
Alternate gene names: 167041021
Gene position: 2456198-2455578 (Counterclockwise)
Preceding gene: 167041022
Following gene: 167041020
Centisome position: 99.96
GC content: 32.05
Gene sequence:
>621_bases ATGACAACAATTGCTGTGTATTTAGGACAGTTGTTAGAATTTATACATCATTATGTAGGAAATTATGGTATCGCTATAAT TATTTTTACTATTTTAATAAGAATACTTCTTTTGCCTTTTTATATACAGCAAATGAATACGATGAAAAAGATGAAAGAAA TACAACCTCTTGTGCAGGAGCTTCAAAAGAAGTATGCTAAAGACCCTCAAAAATTAAACATGGAAACAATGAAATTGTAT CAAGAGAAGAAAGTAAATCCCTTTGGTGGATGTTTACCTATGCTTTTGCCTTTGATAATATTGTGGCCGCTTTTTACAAT GCTTAGAACTTATCCAGCTTTTTCAACTGCTTCTTTTTTATGGATACATAGTCTTGCACAAAAGGACCCTTATTATATAA TTCCTATTTTAGCTGCTGTGACTACTTATATATCTTCTGCCATGGTAGCAACAGACAAAAGTCAAAATTCTATGAATATA ATGATGTCAATTTTTATGGGATGGATAACTGTTTCTCTGCCGGCAGGAGTAGGAATATATTGGGTTACAAGCAATATATT TCAGATAGTGCAGCAGTATATTTTTATGAGAGAGACAAATACTGCTAAGGGGGAATCATAA
Upstream 100 bases:
>100_bases TTTAAAGGGCGGAATTATGTCAATTTGGCGGATTTTAAGGTGCAATCCCTTTAATCCCGGGGGATATGACCCTGTAAAAT AAATTTTTGGAGGTATTATT
Downstream 100 bases:
>100_bases GTTGAAAGAGCTTATAAGGACAGGCAAGACGGTGGAAGAAGCTGTAAATCTTGCCTTACAGGAATTTGGCGTACCGAGGG AAATGGTACAAGTGGAAGTG
Product: 60 kDa inner membrane insertion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQELQKKYAKDPQKLNMETMKLY QEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFLWIHSLAQKDPYYIIPILAAVTTYISSAMVATDKSQNSMNI MMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMRETNTAKGES
Sequences:
>Translated_206_residues MTTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQELQKKYAKDPQKLNMETMKLY QEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFLWIHSLAQKDPYYIIPILAAVTTYISSAMVATDKSQNSMNI MMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMRETNTAKGES >Mature_205_residues TTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQELQKKYAKDPQKLNMETMKLYQ EKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFLWIHSLAQKDPYYIIPILAAVTTYISSAMVATDKSQNSMNIM MSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMRETNTAKGES
Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe
COG id: COG0706
COG function: function code U; Preprotein translocase subunit YidC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the OXA1/oxaA family. Type 3 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790140, Length=196, Percent_Identity=37.2448979591837, Blast_Score=138, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001708 [H]
Pfam domain/function: PF02096 60KD_IMP [H]
EC number: NA
Molecular weight: Translated: 23726; Mature: 23595
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQE CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQKKYAKDPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL HHHHHCCCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH WIHSLAQKDPYYIIPILAAVTTYISSAMVATDKSQNSMNIMMSIFMGWITVSLPAGVGIY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH WVTSNIFQIVQQYIFMRETNTAKGES HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQKKYAKDPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL HHHHHCCCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH WIHSLAQKDPYYIIPILAAVTTYISSAMVATDKSQNSMNIMMSIFMGWITVSLPAGVGIY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH WVTSNIFQIVQQYIFMRETNTAKGES HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]