| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is pepN [H]
Identifier: 167040959
GI number: 167040959
Start: 2388150
End: 2389592
Strand: Reverse
Name: pepN [H]
Synonym: Teth514_2348
Alternate gene names: 167040959
Gene position: 2389592-2388150 (Counterclockwise)
Preceding gene: 167040960
Following gene: 167040956
Centisome position: 97.25
GC content: 31.88
Gene sequence:
>1443_bases ATGAAAATAAAACAAAAAGCACTACTAGGTTTAGTTATAATTGTAATTATCGGCTTAGTGCTTTATCTTTTGCCTGAAGA GACTCAACTTACATCTTACACAATTGAAGCAAAATATGATGACCAAAATAAAATAATTTACGCTACTCAAACAGTAAAAT ACATAAATACCAATGATATCCCCTTAAAAGAAATATACTTTCATCTATATCCAAATGCTTTCAAGACACAAGAGAATTTG CCTTTTACGAAGGAAGAACTCCCTTTTGCCTATCCTAATGGTTTTCAGCCGGGATTTATAGAGATTGAAAAAGTTACTTT TGATAAAGACATTCCAGCTACTTACGAATTGGAAGAACCTAATGAGGAAATTTTAAAAATAAATTTGCCTAAAGAATTAA AAAAAGGAGAAACAATAGAAATCAATATGACCTACAAAGTACAAATTCCACCTTGTAGAAGTAGATTTGGCTATGGGAAC AATACTGTACAGATAGGAAATTGGTATCCTATACTCTCTGTATATGATAAAAATGGCTGGAATAATGACCCCTACTACAT TTTTGGAGATCCTTTTTATAGTGATATAGCAAATTACAAAGTGAAATTGTCAGTACCTAAAAAAATGATAGTTGCCTCTA CTGGAGAGATAAAACAAGAGAAAAACTATGGAGATTCCAAAGAATTAGTTATTGAAGCACAAAAAGTAAGAGATTTTGCT ATGGTTTTAAGCACGAAATTTAAGATAGCAGAGCAGCAGGTAGATGGCATAAAAGTTAAATCCTATTATTTTACAGAAGG GTATGGGGATAAAGCTCTTAAATTTGCTGTAGATGCAATTAAGTTTTACAATGATTATATTGGCAAGTATCCTTATAAAC AATATTCTGTTGTACAGACTGATTTTTACATGGGAGGCATGGAATATCCTAATCTTGTAATGATATCAAAGGATTTGTAT ACAAAAGCTAATTTGTTTCATTTAGAATATGTAATTGCTCACGAGACTGCTCATCAGTGGTGGTATGGTGTTGTGGGGAA TAATCAAATAAAAGAATCTTGGCTGGATGAGGGATTGACGGAGTACACTACAATTATGTATATAGAAAGGTATTATGGTA AGGCAACAGCTGATGAGATTTATAGACTTGTTATAGAGGGAGAATTTAATAAATTTCTAAATACCAATTCAGATATTTCG TTAGCTAAGACTTTGGCAGATTTTAAAGAGTGGAAGGAGTACACTAATATAGCTTATAACAAAGGAGCAATGGTTTTTTA TAATCTGAGGAATCTGATAGGTGACGAAGAATTCAAAAAGGTGCTTCAAAATTATTATGATAAATACAAATATAAAATTG CCACTACGCAAGACCTAATTGACGTAGTGGACAGTGTTACAGGCAAAGATACAGGTGGATTTTTCCAAGAGTGGTTTTAT TAA
Upstream 100 bases:
>100_bases TTCTTTTTTAAGGTGCTTTTTATTTTTTAAGTGAAAAAGTTCTATTATTTAAAAATTTGTACTAATATATATTGAAGGAT AATTTAGGGGAGCTGGTTAT
Downstream 100 bases:
>100_bases ATTATCATTTTTCGCTTTAGCCTTATATCTTCACCGTAGAAATTGAGCAATTTAAAATGGCCAAATATTCGTGAATAAAT TCTTTCAGGATAAATTGCCA
Product: peptidase M1, membrane alanine aminopeptidase
Products: NA
Alternate protein names: Alanine aminopeptidase; Lysyl aminopeptidase; Lys-AP [H]
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKIKQKALLGLVIIVIIGLVLYLLPEETQLTSYTIEAKYDDQNKIIYATQTVKYINTNDIPLKEIYFHLYPNAFKTQENL PFTKEELPFAYPNGFQPGFIEIEKVTFDKDIPATYELEEPNEEILKINLPKELKKGETIEINMTYKVQIPPCRSRFGYGN NTVQIGNWYPILSVYDKNGWNNDPYYIFGDPFYSDIANYKVKLSVPKKMIVASTGEIKQEKNYGDSKELVIEAQKVRDFA MVLSTKFKIAEQQVDGIKVKSYYFTEGYGDKALKFAVDAIKFYNDYIGKYPYKQYSVVQTDFYMGGMEYPNLVMISKDLY TKANLFHLEYVIAHETAHQWWYGVVGNNQIKESWLDEGLTEYTTIMYIERYYGKATADEIYRLVIEGEFNKFLNTNSDIS LAKTLADFKEWKEYTNIAYNKGAMVFYNLRNLIGDEEFKKVLQNYYDKYKYKIATTQDLIDVVDSVTGKDTGGFFQEWFY
Sequences:
>Translated_480_residues MKIKQKALLGLVIIVIIGLVLYLLPEETQLTSYTIEAKYDDQNKIIYATQTVKYINTNDIPLKEIYFHLYPNAFKTQENL PFTKEELPFAYPNGFQPGFIEIEKVTFDKDIPATYELEEPNEEILKINLPKELKKGETIEINMTYKVQIPPCRSRFGYGN NTVQIGNWYPILSVYDKNGWNNDPYYIFGDPFYSDIANYKVKLSVPKKMIVASTGEIKQEKNYGDSKELVIEAQKVRDFA MVLSTKFKIAEQQVDGIKVKSYYFTEGYGDKALKFAVDAIKFYNDYIGKYPYKQYSVVQTDFYMGGMEYPNLVMISKDLY TKANLFHLEYVIAHETAHQWWYGVVGNNQIKESWLDEGLTEYTTIMYIERYYGKATADEIYRLVIEGEFNKFLNTNSDIS LAKTLADFKEWKEYTNIAYNKGAMVFYNLRNLIGDEEFKKVLQNYYDKYKYKIATTQDLIDVVDSVTGKDTGGFFQEWFY >Mature_480_residues MKIKQKALLGLVIIVIIGLVLYLLPEETQLTSYTIEAKYDDQNKIIYATQTVKYINTNDIPLKEIYFHLYPNAFKTQENL PFTKEELPFAYPNGFQPGFIEIEKVTFDKDIPATYELEEPNEEILKINLPKELKKGETIEINMTYKVQIPPCRSRFGYGN NTVQIGNWYPILSVYDKNGWNNDPYYIFGDPFYSDIANYKVKLSVPKKMIVASTGEIKQEKNYGDSKELVIEAQKVRDFA MVLSTKFKIAEQQVDGIKVKSYYFTEGYGDKALKFAVDAIKFYNDYIGKYPYKQYSVVQTDFYMGGMEYPNLVMISKDLY TKANLFHLEYVIAHETAHQWWYGVVGNNQIKESWLDEGLTEYTTIMYIERYYGKATADEIYRLVIEGEFNKFLNTNSDIS LAKTLADFKEWKEYTNIAYNKGAMVFYNLRNLIGDEEFKKVLQNYYDKYKYKIATTQDLIDVVDSVTGKDTGGFFQEWFY
Specific function: Aminopeptidase with broad substrate specificity to several peptides. It has more affinity for oligopeptides than for dipeptides. It plays an essential role in the metabolism, it may be involved in nitrogen supply or protein turnover [H]
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasm. Note=It may be secreted through an unknown mechanism [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M1 family [H]
Homologues:
Organism=Homo sapiens, GI158937236, Length=308, Percent_Identity=25.974025974026, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI4505029, Length=281, Percent_Identity=27.4021352313167, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI310133497, Length=287, Percent_Identity=25.0871080139373, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI94818891, Length=244, Percent_Identity=24.5901639344262, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI94818901, Length=244, Percent_Identity=24.5901639344262, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI194306629, Length=218, Percent_Identity=26.605504587156, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI11641261, Length=218, Percent_Identity=26.605504587156, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71984353, Length=192, Percent_Identity=28.125, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71984339, Length=192, Percent_Identity=28.125, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321837, Length=256, Percent_Identity=25, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI9755335, Length=235, Percent_Identity=25.531914893617, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646514, Length=259, Percent_Identity=25.8687258687259, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646516, Length=259, Percent_Identity=26.6409266409266, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24646518, Length=259, Percent_Identity=26.6409266409266, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24585062, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24585064, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24585066, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI45550350, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001930 - InterPro: IPR014782 [H]
Pfam domain/function: PF01433 Peptidase_M1 [H]
EC number: =3.4.11.2 [H]
Molecular weight: Translated: 56082; Mature: 56082
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKQKALLGLVIIVIIGLVLYLLPEETQLTSYTIEAKYDDQNKIIYATQTVKYINTNDI CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCC PLKEIYFHLYPNAFKTQENLPFTKEELPFAYPNGFQPGFIEIEKVTFDKDIPATYELEEP CHHHHHEEECCCHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCC NEEILKINLPKELKKGETIEINMTYKVQIPPCRSRFGYGNNTVQIGNWYPILSVYDKNGW CCEEEEEECCHHHCCCCEEEEEEEEEEECCCHHHHCCCCCCEEEECCEEEEEEEEECCCC NNDPYYIFGDPFYSDIANYKVKLSVPKKMIVASTGEIKQEKNYGDSKELVIEAQKVRDFA CCCCEEEECCCHHHHHHCCEEEEECCCEEEEECCCCHHHHCCCCCCHHEEEEHHHHHHHH MVLSTKFKIAEQQVDGIKVKSYYFTEGYGDKALKFAVDAIKFYNDYIGKYPYKQYSVVQT HHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE DFYMGGMEYPNLVMISKDLYTKANLFHLEYVIAHETAHQWWYGVVGNNQIKESWLDEGLT EEEECCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCHH EYTTIMYIERYYGKATADEIYRLVIEGEFNKFLNTNSDISLAKTLADFKEWKEYTNIAYN HHHHHEEHHHHHCCCCHHHHEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEC KGAMVFYNLRNLIGDEEFKKVLQNYYDKYKYKIATTQDLIDVVDSVTGKDTGGFFQEWFY CCCEEEEEHHHHHCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCCCCHHHHHCC >Mature Secondary Structure MKIKQKALLGLVIIVIIGLVLYLLPEETQLTSYTIEAKYDDQNKIIYATQTVKYINTNDI CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCC PLKEIYFHLYPNAFKTQENLPFTKEELPFAYPNGFQPGFIEIEKVTFDKDIPATYELEEP CHHHHHEEECCCHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCC NEEILKINLPKELKKGETIEINMTYKVQIPPCRSRFGYGNNTVQIGNWYPILSVYDKNGW CCEEEEEECCHHHCCCCEEEEEEEEEEECCCHHHHCCCCCCEEEECCEEEEEEEEECCCC NNDPYYIFGDPFYSDIANYKVKLSVPKKMIVASTGEIKQEKNYGDSKELVIEAQKVRDFA CCCCEEEECCCHHHHHHCCEEEEECCCEEEEECCCCHHHHCCCCCCHHEEEEHHHHHHHH MVLSTKFKIAEQQVDGIKVKSYYFTEGYGDKALKFAVDAIKFYNDYIGKYPYKQYSVVQT HHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE DFYMGGMEYPNLVMISKDLYTKANLFHLEYVIAHETAHQWWYGVVGNNQIKESWLDEGLT EEEECCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCHH EYTTIMYIERYYGKATADEIYRLVIEGEFNKFLNTNSDISLAKTLADFKEWKEYTNIAYN HHHHHEEHHHHHCCCCHHHHEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEC KGAMVFYNLRNLIGDEEFKKVLQNYYDKYKYKIATTQDLIDVVDSVTGKDTGGFFQEWFY CCCEEEEEHHHHHCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA