BacMap

Definition	Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession	NC_010320
Length	2,457,259

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The map label for this gene is yurY [H]

Identifier: 167040943

GI number: 167040943

Start: 2374307

End: 2375053

Strand: Reverse

Name: yurY [H]

Synonym: Teth514_2332

Alternate gene names: 167040943

Gene position: 2375053-2374307 (Counterclockwise)

Preceding gene: 167040944

Following gene: 167040942

Centisome position: 96.65

GC content: 35.61

Gene sequence:

>747_bases
ATGAGAGAAACATTGTTAGAAATAAAGGATTTGCATGTAGAAGTTGAGGACAAATATATCCTTAAAGGGCTTAATTTAAC
AATAAAAAAAGGAGAAATACATGCAATTATGGGACCCAATGGTGGTGGTAAAAGCACATTGTGCAATTCCATCATGGGGA
ATCCTAAATATAAAGTGACTTCAGGACAGATTTTATTTGAAGGAGAAGATATAACAAATCTAAAAGTCAATGAAAGGGCA
AAAAAGGGCATCTTTTTGTCTTTTCAGTACCCTGAAGAAATACCCGGAATAACAGTGGATAATTTTATAAGGACCTCTGT
TAATATTGTGACAGGCCAAAATGTGTCGATGCTTCAATTTGCAAAAGACATGAAAAACACATTAGAGCTTTTAGACATGA
AATCCGAGTACAGAAGTAGGTATTTAAATGTAGGTTTTTCTGGAGGGGAAAAGAAAAAAACTGAGATACTCCAGATGGCT
TTTCTAAAGCCTAAACTTGTAATGCTTGACGAAATTGACTCTGGTCTTGATATAGATGCCTTAAAAGTTGTCGCGGAAGC
GGTCAAAAAGCTAAAGACTGAAGAGATGTCTATCTTAATAGTCACCCACTACAACAGGATATTGGATTACCTTGAGCCAG
ATGTAATATCTGTTTTAATGGATGGAAAGATTGTAAAAAGTGGTGACAGGGACCTTGCAAAGATTCTTGAAGAAAAGGGT
TATGACTTTGTGAGAAATGGCGTGTAA

Upstream 100 bases:

>100_bases
TTGTGTCTTTTTCTATTGATTTGGTTGTTTAGGTGGTGTATAATAGTATTGCTTGAGTATTCCTATTAAAATAGTCGGAA
TTAAAAAGGAGTTGTGAAAG

Downstream 100 bases:

>100_bases
CCCATAGGAGGCGAAAATAATGAAAAAACCAGATATAAAGGAAATAGATTTTAGCATATACGACGTCAAAGACAACGTAA
AGTATGAGTATCAGACAGGT

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRETLLEIKDLHVEVEDKYILKGLNLTIKKGEIHAIMGPNGGGKSTLCNSIMGNPKYKVTSGQILFEGEDITNLKVNERA
KKGIFLSFQYPEEIPGITVDNFIRTSVNIVTGQNVSMLQFAKDMKNTLELLDMKSEYRSRYLNVGFSGGEKKKTEILQMA
FLKPKLVMLDEIDSGLDIDALKVVAEAVKKLKTEEMSILIVTHYNRILDYLEPDVISVLMDGKIVKSGDRDLAKILEEKG
YDFVRNGV

Sequences:

>Translated_248_residues
MRETLLEIKDLHVEVEDKYILKGLNLTIKKGEIHAIMGPNGGGKSTLCNSIMGNPKYKVTSGQILFEGEDITNLKVNERA
KKGIFLSFQYPEEIPGITVDNFIRTSVNIVTGQNVSMLQFAKDMKNTLELLDMKSEYRSRYLNVGFSGGEKKKTEILQMA
FLKPKLVMLDEIDSGLDIDALKVVAEAVKKLKTEEMSILIVTHYNRILDYLEPDVISVLMDGKIVKSGDRDLAKILEEKG
YDFVRNGV
>Mature_248_residues
MRETLLEIKDLHVEVEDKYILKGLNLTIKKGEIHAIMGPNGGGKSTLCNSIMGNPKYKVTSGQILFEGEDITNLKVNERA
KKGIFLSFQYPEEIPGITVDNFIRTSVNIVTGQNVSMLQFAKDMKNTLELLDMKSEYRSRYLNVGFSGGEKKKTEILQMA
FLKPKLVMLDEIDSGLDIDALKVVAEAVKKLKTEEMSILIVTHYNRILDYLEPDVISVLMDGKIVKSGDRDLAKILEEKG
YDFVRNGV

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=221, Percent_Identity=31.6742081447964, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI255708477, Length=221, Percent_Identity=31.6742081447964, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI4505771, Length=252, Percent_Identity=30.1587301587302, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI9961250, Length=251, Percent_Identity=29.4820717131474, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI9961252, Length=252, Percent_Identity=30.1587301587302, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI42741659, Length=252, Percent_Identity=29.3650793650794, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=52.4590163934426, Blast_Score=257, Evalue=5e-70,
Organism=Escherichia coli, GI1787029, Length=201, Percent_Identity=27.363184079602, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=23.2456140350877, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788506, Length=261, Percent_Identity=25.2873563218391, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786698, Length=209, Percent_Identity=27.7511961722488, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=29.1079812206573, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788225, Length=235, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082268, Length=217, Percent_Identity=29.4930875576037, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789672, Length=197, Percent_Identity=28.4263959390863, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788897, Length=219, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788210, Length=215, Percent_Identity=26.046511627907, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787792, Length=225, Percent_Identity=28, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789864, Length=214, Percent_Identity=25.7009345794392, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786398, Length=211, Percent_Identity=24.6445497630332, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786654, Length=234, Percent_Identity=23.5042735042735, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786319, Length=189, Percent_Identity=30.1587301587302, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081791, Length=205, Percent_Identity=28.780487804878, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787500, Length=248, Percent_Identity=26.6129032258064, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790162, Length=206, Percent_Identity=25.2427184466019, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787105, Length=230, Percent_Identity=27.8260869565217, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788472, Length=225, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787759, Length=241, Percent_Identity=25.7261410788382, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789891, Length=220, Percent_Identity=27.7272727272727, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI48995001, Length=217, Percent_Identity=26.2672811059908, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=200, Percent_Identity=26.5, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788761, Length=202, Percent_Identity=26.7326732673267, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789032, Length=255, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789963, Length=215, Percent_Identity=27.4418604651163, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789962, Length=220, Percent_Identity=26.3636363636364, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=225, Percent_Identity=28, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17543740, Length=215, Percent_Identity=29.7674418604651, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=223, Percent_Identity=30.0448430493274, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=233, Percent_Identity=29.1845493562232, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=215, Percent_Identity=29.3023255813954, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=219, Percent_Identity=28.310502283105, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=234, Percent_Identity=26.0683760683761, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=233, Percent_Identity=27.4678111587983, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=224, Percent_Identity=29.9107142857143, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=224, Percent_Identity=29.9107142857143, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=224, Percent_Identity=29.9107142857143, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=235, Percent_Identity=28.936170212766, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=215, Percent_Identity=27.906976744186, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=232, Percent_Identity=27.1551724137931, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=229, Percent_Identity=25.3275109170306, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=213, Percent_Identity=26.2910798122066, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=223, Percent_Identity=27.8026905829596, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6324498, Length=200, Percent_Identity=30, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281363262, Length=221, Percent_Identity=31.2217194570136, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24653245, Length=221, Percent_Identity=31.2217194570136, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85726357, Length=228, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161076684, Length=246, Percent_Identity=28.4552845528455, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581617, Length=246, Percent_Identity=28.4552845528455, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581615, Length=246, Percent_Identity=28.4552845528455, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574744, Length=216, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920532, Length=225, Percent_Identity=28, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580930, Length=225, Percent_Identity=28, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161076682, Length=246, Percent_Identity=28.4552845528455, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24659289, Length=222, Percent_Identity=27.9279279279279, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17136662, Length=229, Percent_Identity=27.5109170305677, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28574533, Length=234, Percent_Identity=27.3504273504274, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643674, Length=242, Percent_Identity=27.6859504132231, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27894; Mature: 27894

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRETLLEIKDLHVEVEDKYILKGLNLTIKKGEIHAIMGPNGGGKSTLCNSIMGNPKYKVT
CCCHHHHHHHCEEEECCEEEEECCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEE
SGQILFEGEDITNLKVNERAKKGIFLSFQYPEEIPGITVDNFIRTSVNIVTGQNVSMLQF
CCEEEECCCCCCCCEECCCCCCCEEEEEECHHHCCCCCHHHHHHCEEEEEECCCCHHHHH
AKDMKNTLELLDMKSEYRSRYLNVGFSGGEKKKTEILQMAFLKPKLVMLDEIDSGLDIDA
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LKVVAEAVKKLKTEEMSILIVTHYNRILDYLEPDVISVLMDGKIVKSGDRDLAKILEEKG
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCHHHHHHHHCCEEEECCCHHHHHHHHHCC
YDFVRNGV
CHHHHCCC
>Mature Secondary Structure
MRETLLEIKDLHVEVEDKYILKGLNLTIKKGEIHAIMGPNGGGKSTLCNSIMGNPKYKVT
CCCHHHHHHHCEEEECCEEEEECCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEE
SGQILFEGEDITNLKVNERAKKGIFLSFQYPEEIPGITVDNFIRTSVNIVTGQNVSMLQF
CCEEEECCCCCCCCEECCCCCCCEEEEEECHHHCCCCCHHHHHHCEEEEEECCCCHHHHH
AKDMKNTLELLDMKSEYRSRYLNVGFSGGEKKKTEILQMAFLKPKLVMLDEIDSGLDIDA
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LKVVAEAVKKLKTEEMSILIVTHYNRILDYLEPDVISVLMDGKIVKSGDRDLAKILEEKG
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCHHHHHHHHCCEEEECCCHHHHHHHHHCC
YDFVRNGV
CHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]