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The map label for this gene is sufB [H]

Identifier: 167040942

GI number: 167040942

Start: 2372884

End: 2374287

Strand: Reverse

Name: sufB [H]

Synonym: Teth514_2331

Alternate gene names: 167040942

Gene position: 2374287-2372884 (Counterclockwise)

Preceding gene: 167040943

Following gene: 167040941

Centisome position: 96.62

GC content: 39.32

Gene sequence:

>1404_bases
ATGAAAAAACCAGATATAAAGGAAATAGATTTTAGCATATACGACGTCAAAGACAACGTAAAGTATGAGTATCAGACAGG
TAAAGGACTTTCTAAAGAAGTTGTTTTAGAAATATCTGAGCAAAAGAATGAACCTTCCTGGATGAGGGATTTTCGATTAA
AAGCCTTGGAGATATATCAAAAAATGCCTATGCCCACATGGGGTGTTGATTTAAGTCAACTTGACATAGATTCTATTATT
GCCTATATACGCCCAAGTGCAAAAATGCAAAGGTCGTGGGATGAAGTTCCAGAAGAGATAAGGCGTACTTTTGAAAGGTT
GGGGATTCCTGAGGCGGAAAGAAAAGCATTGGCGGGAGTAGGTGCTCAATACGACTCTGAAGTTGTATATCACAATATTA
AAGAAAGCCTTACTCAACAGGGTGTCATATTTGAGGACATGGACACTGCAATAAAAAAATATCCTGACATAATAAAAGAG
TACTTTATGACAAAAAACGTGACGCCTTATGATCACAAATTTGCAGCCCTTCACGCTGCAATATGGAGCGGAGGCACATT
TGTTTATGTTCCAGAAGGGGTCAAAGTGGAGGTTCCACTTCAGGCTTATTTTAGAATGAATGCACCAGGAAGCGGACAGT
TTGAGCACACTCTCATAATTGCTGACAAAGGCAGTGAAGTACATTTTATAGAAGGCTGTTCTGCACCACAGTATTCTGTT
TCAAACTTACATGCAGGTTGCGTAGAACTTTTTGTAAATGAAGGGGCTCGCATAATTTATTCTACTATAGAAAACTGGAG
TAAAAATACCTATAATCTAAATACAAAAAGGGCAATTGTTGAGAAAGATGGCATTATAGAGTGGATATCCGGCTCTTTTG
GAAGCCACAAGACAATGCTTTATCCTGCTTCTATATTAAAAGGAGAAGGAGCAAAGGCGGAATACACCGGTGTGACTTTT
GCTGCAAAAGGGCAGCATTTAGATACAGGTTCAAAAATGATACACTTAGCTCCTCATACTTCTTCAAAGGTTTTAGCAAA
GAGTATATCAAAAGATGGTGGAATATCAAGCTATAGAGGACTTCTCAAAATAGGACCTAATGCGGAAGGTGCAAAGGCTT
CTGTCCAGTGTGAAGGCTTGATGTTGGACGATATTTCAAGGTCTGACACAATGCCAGTAATAGAAATAGAAAATGACAAT
GTGGACATTGGTCATGAGGCGAAAGTGGGAAGAATAAGCGATGAACAGATATTTTACCTCATGTCCAGAGGTTTAAGCGA
AGACGATGCAAGGGCTATGATTGTAAGAGGTTTTGTTGAGCCTATAGCTAAAGCTTTGCCATTGGAATATGCAGTGGAGA
TGAATAGGCTCATTAAACTTGAGCTGGAAGGCGCAATAGGATAG

Upstream 100 bases:

>100_bases
AAGATTGTAAAAAGTGGTGACAGGGACCTTGCAAAGATTCTTGAAGAAAAGGGTTATGACTTTGTGAGAAATGGCGTGTA
ACCCATAGGAGGCGAAAATA

Downstream 100 bases:

>100_bases
GAGTGAAAATATGTGGAAGAGAGTTAGTATGGAGGAAATACAACAGCCTTCTTATAAAGAATACACTTCAGCAGTAATAA
AAGATTTGTCTCATGATACA

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MKKPDIKEIDFSIYDVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKMPMPTWGVDLSQLDIDSII
AYIRPSAKMQRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKE
YFMTKNVTPYDHKFAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGCSAPQYSV
SNLHAGCVELFVNEGARIIYSTIENWSKNTYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTF
AAKGQHLDTGSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDN
VDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG

Sequences:

>Translated_467_residues
MKKPDIKEIDFSIYDVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKMPMPTWGVDLSQLDIDSII
AYIRPSAKMQRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKE
YFMTKNVTPYDHKFAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGCSAPQYSV
SNLHAGCVELFVNEGARIIYSTIENWSKNTYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTF
AAKGQHLDTGSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDN
VDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG
>Mature_467_residues
MKKPDIKEIDFSIYDVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKMPMPTWGVDLSQLDIDSII
AYIRPSAKMQRSWDEVPEEIRRTFERLGIPEAERKALAGVGAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKE
YFMTKNVTPYDHKFAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGCSAPQYSV
SNLHAGCVELFVNEGARIIYSTIENWSKNTYNLNTKRAIVEKDGIIEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTF
AAKGQHLDTGSKMIHLAPHTSSKVLAKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDN
VDIGHEAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=466, Percent_Identity=38.1974248927039, Blast_Score=325, Evalue=5e-90,
Organism=Escherichia coli, GI1787971, Length=158, Percent_Identity=31.6455696202532, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52170; Mature: 52170

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPDIKEIDFSIYDVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQ
CCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHH
KMPMPTWGVDLSQLDIDSIIAYIRPSAKMQRSWDEVPEEIRRTFERLGIPEAERKALAGV
HCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKEYFMTKNVTPYDHKFAALHAA
CCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGCSAPQYSV
HHCCCEEEEECCCCEEEECHHEEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCH
SNLHAGCVELFVNEGARIIYSTIENWSKNTYNLNTKRAIVEKDGIIEWISGSFGSHKTML
HHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEE
YPASILKGEGAKAEYTGVTFAAKGQHLDTGSKMIHLAPHTSSKVLAKSISKDGGISSYRG
EEHHHHCCCCCCEEECCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHCCC
LLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDNVDIGHEAKVGRISDEQIFYL
EEEECCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHH
MSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG
HHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure
MKKPDIKEIDFSIYDVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQ
CCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHH
KMPMPTWGVDLSQLDIDSIIAYIRPSAKMQRSWDEVPEEIRRTFERLGIPEAERKALAGV
HCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKEYFMTKNVTPYDHKFAALHAA
CCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGCSAPQYSV
HHCCCEEEEECCCCEEEECHHEEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCH
SNLHAGCVELFVNEGARIIYSTIENWSKNTYNLNTKRAIVEKDGIIEWISGSFGSHKTML
HHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEE
YPASILKGEGAKAEYTGVTFAAKGQHLDTGSKMIHLAPHTSSKVLAKSISKDGGISSYRG
EEHHHHCCCCCCEEECCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHCCC
LLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDNVDIGHEAKVGRISDEQIFYL
EEEECCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHH
MSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG
HHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]