Click here to switch to the map view.

The map label for this gene is 167040938

Identifier: 167040938

GI number: 167040938

Start: 2369244

End: 2369999

Strand: Reverse

Name: 167040938

Synonym: Teth514_2327

Alternate gene names: NA

Gene position: 2369999-2369244 (Counterclockwise)

Preceding gene: 167040939

Following gene: 167040937

Centisome position: 96.45

GC content: 29.37

Gene sequence:

>756_bases
ATGAGAATTACTTTGGAATTTGTGGGAGAAAAAAATTTAGTATTGCCAATTCATTATAATTATATAGTTCAAGGCTTTTT
GTATGACCTCATGGGGGACAGTGAGTTTGCAGCTTTTTTACATGATGAAGGGTTTCAATATGAAAAAAGAAAATTTAAAT
TATTTACTTTTTCAAGAATTGAAGGGGAGTTCAAGATTTTAACAGATTCCAAAGGGCAGAAAAAAATAAGCATAAAACCT
CCTTTTAAATTTACTGTTGCCTCTCCTTTAGATGAATTTATATTTGATATTTCAAAAAATGCGTTAAAAAAGGAGTATTG
CCATTTTAATGGTCAAAAATTTATTTTGAATTCACTCAATATAGACAATCCTCCTGTTTTTAAAAATAAAGCAAGGATAA
AATTTATTTCTCCAGTTGTGATGTATACTACTTTAAAGGATGGTGATATAAAATATACTTATTATTATTCCCCTTGGGAT
GAAAAATTTTCTCCTCTTTTACTTAATAATCTGCTTAAAAAGTATGAATTAGTATACAAAATAAAAGCGGAAGATCCATA
TTTTAAGCTTTATCCCTTATCAGAAAAGGAAGATAGGAGATATTCAAAGATGATTAAATACAAAAATGTTTATGTGAAGG
GATGGATGGGTATATACGACGTAGAAAGCAGTCCTGAATTATTAGAACTTGCTTACTATACAGGTTTGGGTGCAAAAAAC
TCCCAAGGATTTGGGTGTTTTGAGATAATTGGGTGA

Upstream 100 bases:

>100_bases
TTAAAAGTTAAGAAGGAAAAATGGGAATTAATGTAGAATTATATACACGTAAAACCAATATATCCATATCTTCACTGGAA
TAAATTTATGAGGTGTTATT

Downstream 100 bases:

>100_bases
AAGAAAGGAGGTAAGGGAAGTAAAATATATTTTGTTCATCTAAAGTAATAGGGGGTGATAAAAATTATTGAGGGAATAGT
TCAAATAGGAGATATAGTAA

Product: CRISPR-associated Cas family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRIEGEFKILTDSKGQKKISIKP
PFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLNIDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWD
EKFSPLLLNNLLKKYELVYKIKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKN
SQGFGCFEIIG

Sequences:

>Translated_251_residues
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRIEGEFKILTDSKGQKKISIKP
PFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLNIDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWD
EKFSPLLLNNLLKKYELVYKIKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKN
SQGFGCFEIIG
>Mature_251_residues
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRIEGEFKILTDSKGQKKISIKP
PFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLNIDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWD
EKFSPLLLNNLLKKYELVYKIKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKN
SQGFGCFEIIG

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010156
- InterPro:   IPR002743 [H]

Pfam domain/function: PF01881 DUF57 [H]

EC number: NA

Molecular weight: Translated: 29534; Mature: 29534

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRI
CEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCEEEEEEEEEEC
EGEFKILTDSKGQKKISIKPPFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLN
CCEEEEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
IDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWDEKFSPLLLNNLLKKYELVYK
CCCCCCCCCCCEEEEECEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHEEEEEE
IKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKN
EECCCCEEEEEECCCHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCEEEEEHHCCCCCC
SQGFGCFEIIG
CCCCEEEEECC
>Mature Secondary Structure
MRITLEFVGEKNLVLPIHYNYIVQGFLYDLMGDSEFAAFLHDEGFQYEKRKFKLFTFSRI
CEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCEEEEEEEEEEC
EGEFKILTDSKGQKKISIKPPFKFTVASPLDEFIFDISKNALKKEYCHFNGQKFILNSLN
CCEEEEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
IDNPPVFKNKARIKFISPVVMYTTLKDGDIKYTYYYSPWDEKFSPLLLNNLLKKYELVYK
CCCCCCCCCCCEEEEECEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHEEEEEE
IKAEDPYFKLYPLSEKEDRRYSKMIKYKNVYVKGWMGIYDVESSPELLELAYYTGLGAKN
EECCCCEEEEEECCCHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCEEEEEHHCCCCCC
SQGFGCFEIIG
CCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]