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The map label for this gene is nifU [H]

Identifier: 167040939

GI number: 167040939

Start: 2370188

End: 2370601

Strand: Reverse

Name: nifU [H]

Synonym: Teth514_2328

Alternate gene names: 167040939

Gene position: 2370601-2370188 (Counterclockwise)

Preceding gene: 167040940

Following gene: 167040938

Centisome position: 96.47

GC content: 38.16

Gene sequence:

>414_bases
ATGAGCGATTTAAATCAGCTTTATTCTGAAGTTATAATGGAACACTATGAAAACTCCCCTCATAGGAGAGAGCTTAAAGA
TGCTACTCACAAAGAAAGGGGGCACAATCCTCTTTGCGGTGACGACATTACCCTTTATCTAAAAATGAATGGTGACATTA
TAGAAGACGCATCTTTTACAGGTCATGGATGTGCTATAAGCCAAGCTTCAACCTCTATGATGATAGACCTTATAAAAGGG
AAAGACAAAAAAGAGGCCTTAAGGCTTGTTCAAGAATTTATAGACATGATACACAAAAAAGACGTAAACTTAGATGAATT
AGGTGATGCCCAAGTACTGCATGGAGTATCTGACTTTCCTGCCCGTGTAAAATGTGCTCTACTGGCTTGGAAGACACTTC
AGGAAATTTTATAA

Upstream 100 bases:

>100_bases
GCGTTCCTGCAACTGTAAGAGCAAGCTTTTATCTCTACAACGATTTTGAGGATATTGATGCCCTTGTGGAAGGACTAAAA
AAAGTCAGGAAGTGGTTTAA

Downstream 100 bases:

>100_bases
AGAGAGAAAAGCTCAAAATGGGCTTTTCTTTTTTGTTTTATGGTTTACTATTTATTAAATAAATTTAGACAAAATCATTA
AAAATTTTTTAAAAGTTAAG

Product: NifU family SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFTGHGCAISQASTSMMIDLIKG
KDKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFPARVKCALLAWKTLQEIL

Sequences:

>Translated_137_residues
MSDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFTGHGCAISQASTSMMIDLIKG
KDKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFPARVKCALLAWKTLQEIL
>Mature_136_residues
SDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFTGHGCAISQASTSMMIDLIKGK
DKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFPARVKCALLAWKTLQEIL

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 15508; Mature: 15377

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFT
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCC
GHGCAISQASTSMMIDLIKGKDKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFP
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCC
ARVKCALLAWKTLQEIL
HHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SDLNQLYSEVIMEHYENSPHRRELKDATHKERGHNPLCGDDITLYLKMNGDIIEDASFT
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCC
GHGCAISQASTSMMIDLIKGKDKKEALRLVQEFIDMIHKKDVNLDELGDAQVLHGVSDFP
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCC
ARVKCALLAWKTLQEIL
HHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]