Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is 167040871

Identifier: 167040871

GI number: 167040871

Start: 2255996

End: 2256436

Strand: Reverse

Name: 167040871

Synonym: Teth514_2252

Alternate gene names: NA

Gene position: 2256436-2255996 (Counterclockwise)

Preceding gene: 167040872

Following gene: 167040870

Centisome position: 91.83

GC content: 43.54

Gene sequence:

>441_bases
GTGAAAGAAAGAGCTATTGTTGTTTCAAAGAGGGGCAACCAAGCCGAAGTTGAAGTGATACGGACGTCTGCCTGTTCAAA
GTGTAGGGCTTGCAGTAGCGGCTCGAATAAACAGACCTTAAAAGTTTGGGCTGAAAATGAAACGAATGCTGAAGTAGGCC
AGATAGTGGAAATCGAGATGGAGTCTAGGGCGCTGCTTTCCGCTACTTTTATACTTTACGTGATTCCGCTGGCAGGTTTT
CTTTTGGGAGTGGTCCTGGGGTTGAAGCTGGCAGATATCCTGAATATCATATGGAGGGAGCTTTTTTCGTTCATAATGGG
ACTTCTTTTTATTGCACTGGCTTTCGCAGGTATATACGCTAACAACGGTTTTTTTGAAAAGAGCCGCATGTTCACTGCGA
AAATAGTGAATATTTTGGACAACCAGCCTAAAAAACATTGA

Upstream 100 bases:

>100_bases
TTTTATTTTAGCACTTCTAATAACAGAGGAACTTATTTTAAACACCCATTGATTTAAAACTATTTGTGTGATATCATAAA
AACTATCGGAGGGATTCTTA

Downstream 100 bases:

>100_bases
CAATGATATAATTCATTGTCAATGTTTTTTTGCTTTTGGGGGCTGAGTGCGAAGCATGACGAAGAATACCATACAGGAGG
GGAATATTTAAAAGTGTGAT

Product: positive regulator of sigma E, RseC/MucC

Products: NA

Alternate protein names: Positive Regulator Of Sigma(E) RseC/MucC; Positive Regulator Of Sigma E Rsec/Mucc

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEMESRALLSATFILYVIPLAGF
LLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYANNGFFEKSRMFTAKIVNILDNQPKKH

Sequences:

>Translated_146_residues
MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEMESRALLSATFILYVIPLAGF
LLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYANNGFFEKSRMFTAKIVNILDNQPKKH
>Mature_146_residues
MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEMESRALLSATFILYVIPLAGF
LLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYANNGFFEKSRMFTAKIVNILDNQPKKH

Specific function: Unknown

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16213; Mature: 16213

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEM
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEEH
ESRALLSATFILYVIPLAGFLLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNGFFEKSRMFTAKIVNILDNQPKKH
CCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEM
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEEH
ESRALLSATFILYVIPLAGFLLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNGFFEKSRMFTAKIVNILDNQPKKH
CCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA