| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040871
Identifier: 167040871
GI number: 167040871
Start: 2255996
End: 2256436
Strand: Reverse
Name: 167040871
Synonym: Teth514_2252
Alternate gene names: NA
Gene position: 2256436-2255996 (Counterclockwise)
Preceding gene: 167040872
Following gene: 167040870
Centisome position: 91.83
GC content: 43.54
Gene sequence:
>441_bases GTGAAAGAAAGAGCTATTGTTGTTTCAAAGAGGGGCAACCAAGCCGAAGTTGAAGTGATACGGACGTCTGCCTGTTCAAA GTGTAGGGCTTGCAGTAGCGGCTCGAATAAACAGACCTTAAAAGTTTGGGCTGAAAATGAAACGAATGCTGAAGTAGGCC AGATAGTGGAAATCGAGATGGAGTCTAGGGCGCTGCTTTCCGCTACTTTTATACTTTACGTGATTCCGCTGGCAGGTTTT CTTTTGGGAGTGGTCCTGGGGTTGAAGCTGGCAGATATCCTGAATATCATATGGAGGGAGCTTTTTTCGTTCATAATGGG ACTTCTTTTTATTGCACTGGCTTTCGCAGGTATATACGCTAACAACGGTTTTTTTGAAAAGAGCCGCATGTTCACTGCGA AAATAGTGAATATTTTGGACAACCAGCCTAAAAAACATTGA
Upstream 100 bases:
>100_bases TTTTATTTTAGCACTTCTAATAACAGAGGAACTTATTTTAAACACCCATTGATTTAAAACTATTTGTGTGATATCATAAA AACTATCGGAGGGATTCTTA
Downstream 100 bases:
>100_bases CAATGATATAATTCATTGTCAATGTTTTTTTGCTTTTGGGGGCTGAGTGCGAAGCATGACGAAGAATACCATACAGGAGG GGAATATTTAAAAGTGTGAT
Product: positive regulator of sigma E, RseC/MucC
Products: NA
Alternate protein names: Positive Regulator Of Sigma(E) RseC/MucC; Positive Regulator Of Sigma E Rsec/Mucc
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEMESRALLSATFILYVIPLAGF LLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYANNGFFEKSRMFTAKIVNILDNQPKKH
Sequences:
>Translated_146_residues MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEMESRALLSATFILYVIPLAGF LLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYANNGFFEKSRMFTAKIVNILDNQPKKH >Mature_146_residues MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEMESRALLSATFILYVIPLAGF LLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYANNGFFEKSRMFTAKIVNILDNQPKKH
Specific function: Unknown
COG id: COG3086
COG function: function code T; Positive regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16213; Mature: 16213
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEM CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEEH ESRALLSATFILYVIPLAGFLLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNGFFEKSRMFTAKIVNILDNQPKKH CCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKERAIVVSKRGNQAEVEVIRTSACSKCRACSSGSNKQTLKVWAENETNAEVGQIVEIEM CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEEH ESRALLSATFILYVIPLAGFLLGVVLGLKLADILNIIWRELFSFIMGLLFIALAFAGIYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNGFFEKSRMFTAKIVNILDNQPKKH CCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA