| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is 167040747
Identifier: 167040747
GI number: 167040747
Start: 2130263
End: 2131117
Strand: Reverse
Name: 167040747
Synonym: Teth514_2124
Alternate gene names: NA
Gene position: 2131117-2130263 (Counterclockwise)
Preceding gene: 167040748
Following gene: 167040746
Centisome position: 86.73
GC content: 31.35
Gene sequence:
>855_bases ATGAAATTTAGACGGATCGAAGTAAAAATACATTTTTCTACTTTTGTATTTGCATTACTTTTAATTGCGACGGGATTTAT AAAAGAATTAATTGCTATTTTTGCTACAGTTTTTGTTCACGAATGGGGACACATTTATATTGCCAAGAAACTGAAAGTAG AGGTATTACAAGTCAATATCTATCCTTTTGGAGGAATTGCTCTTTTGGACAGCGTAGTGTTTATAAGGCCAGACTTAGAA GTGCTAGTTGCACTGGCAGGACCTATGTCCAATATTTTTTTTGCTTTTTTTGGAGAATTTATTTCACAAGTTTTACAAAT AGAAATGGATTATTTTATAAAAACTAATATTGTAATGGCTTTTTTTAACCTACTTCCAGGGCTTCCTTTGGATGGAGGAC GAATTTTAAAAAGTGTTTTGTCGTATTTTATTAGCCTAAGAAGTGCTATTGCGACTGCTGTTTTTTCTTCCTATGTTATT TCTCTCGTTATGTTATATCTCGTTCTAAAAGACATATTCAATTGGAAGCTAAATGTTGTTTATGCTTTTTTATCGGTGCT ATTAGTAGTCGCGGCAAATAAAGAGAAAAAGGCATCAGCTTTTTTGCAAATGAGAGATCTTTTTAGGAAAAAAGCAGAGT TCTATAAAAAAGGATTGATGGGGGTACATCATATAGCAGTATTAGAAAAGGAGACAATTGTAAATGTTATAAAAAGTTTT ATACCTGCTAAATACCATGTTATAATAATATTAGACGACAAATTTAGGGAAAAATATAGAATAACCGAGACTCAGCTTTT TGAATATGCGGTAGAACATGGATTGTATTTACCAATTGGTGAGATTATAAAATGA
Upstream 100 bases:
>100_bases CCACTGCTCCTCACTTGCATTTTGAAGTTTGGGAAAATGGCAAGCCAGTAGACCCCTTGACAAAGGTTGTTATAGGGGAT GTTGCCAGTGAAGGCGCAAA
Downstream 100 bases:
>100_bases CTATGGAGGAAGGAAAATGAATAACTTAAAGGATAAAATAGATGCTTTGCTTATGAAAGTAAGCAAACCTACAAGATACA CAGGAGGAGAATTAAATTCT
Product: peptidase M50
Products: NA
Alternate protein names: Site-2-type intermembrane protease [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKFRRIEVKIHFSTFVFALLLIATGFIKELIAIFATVFVHEWGHIYIAKKLKVEVLQVNIYPFGGIALLDSVVFIRPDLE VLVALAGPMSNIFFAFFGEFISQVLQIEMDYFIKTNIVMAFFNLLPGLPLDGGRILKSVLSYFISLRSAIATAVFSSYVI SLVMLYLVLKDIFNWKLNVVYAFLSVLLVVAANKEKKASAFLQMRDLFRKKAEFYKKGLMGVHHIAVLEKETIVNVIKSF IPAKYHVIIILDDKFREKYRITETQLFEYAVEHGLYLPIGEIIK
Sequences:
>Translated_284_residues MKFRRIEVKIHFSTFVFALLLIATGFIKELIAIFATVFVHEWGHIYIAKKLKVEVLQVNIYPFGGIALLDSVVFIRPDLE VLVALAGPMSNIFFAFFGEFISQVLQIEMDYFIKTNIVMAFFNLLPGLPLDGGRILKSVLSYFISLRSAIATAVFSSYVI SLVMLYLVLKDIFNWKLNVVYAFLSVLLVVAANKEKKASAFLQMRDLFRKKAEFYKKGLMGVHHIAVLEKETIVNVIKSF IPAKYHVIIILDDKFREKYRITETQLFEYAVEHGLYLPIGEIIK >Mature_284_residues MKFRRIEVKIHFSTFVFALLLIATGFIKELIAIFATVFVHEWGHIYIAKKLKVEVLQVNIYPFGGIALLDSVVFIRPDLE VLVALAGPMSNIFFAFFGEFISQVLQIEMDYFIKTNIVMAFFNLLPGLPLDGGRILKSVLSYFISLRSAIATAVFSSYVI SLVMLYLVLKDIFNWKLNVVYAFLSVLLVVAANKEKKASAFLQMRDLFRKKAEFYKKGLMGVHHIAVLEKETIVNVIKSF IPAKYHVIIILDDKFREKYRITETQLFEYAVEHGLYLPIGEIIK
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR008915 - InterPro: IPR016483 [H]
Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 32565; Mature: 32565
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRRIEVKIHFSTFVFALLLIATGFIKELIAIFATVFVHEWGHIYIAKKLKVEVLQVNI CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEE YPFGGIALLDSVVFIRPDLEVLVALAGPMSNIFFAFFGEFISQVLQIEMDYFIKTNIVMA ECCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFNLLPGLPLDGGRILKSVLSYFISLRSAIATAVFSSYVISLVMLYLVLKDIFNWKLNVV HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAFLSVLLVVAANKEKKASAFLQMRDLFRKKAEFYKKGLMGVHHIAVLEKETIVNVIKSF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IPAKYHVIIILDDKFREKYRITETQLFEYAVEHGLYLPIGEIIK CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure MKFRRIEVKIHFSTFVFALLLIATGFIKELIAIFATVFVHEWGHIYIAKKLKVEVLQVNI CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEE YPFGGIALLDSVVFIRPDLEVLVALAGPMSNIFFAFFGEFISQVLQIEMDYFIKTNIVMA ECCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFNLLPGLPLDGGRILKSVLSYFISLRSAIATAVFSSYVISLVMLYLVLKDIFNWKLNVV HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAFLSVLLVVAANKEKKASAFLQMRDLFRKKAEFYKKGLMGVHHIAVLEKETIVNVIKSF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IPAKYHVIIILDDKFREKYRITETQLFEYAVEHGLYLPIGEIIK CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]